RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 TBC1D8O95759 1140 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 SRGAP2CP0DJJ0 459 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 ABCB4P21439 1286 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 PROZP22891 400 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 PDE6CP51160 858 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 PTENP60484 403 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 FMO1Q01740 532 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 CDR2Q01850 454 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 SURF1Q15526 300 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 LONRF2Q1L5Z9 754 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 WDR44Q5JSH3 913 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 LMBRD2Q68DH5 695 aaPredicted RBP12.67□□□□□ -0.38
SMAD3-202ENST00000439724 EFCAB12Q6NXP0 572 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 PLEKHH3Q7Z736 793 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 NT5DC3Q86UY8 548 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 SLC47A2Q86VL8 602 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 LINC01465Q8N7H1 131 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 SLC35G2Q8TBE7 412 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 TRAPPC12Q8WVT3 735 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 DHX38Q92620 1227 aaKnown RBP12.67□□□□□ -0.38
SMAD3-202ENST00000439724 ARHGEF26Q96DR7 871 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 MAML3Q96JK9 1138 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 PCDHB18PQ96TA0 734 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 ARID3AQ99856 593 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 PTPN18Q99952 460 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 PI4K2AQ9BTU6 479 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 THAP2Q9H0W7 228 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 FZD8Q9H461 694 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 RNPEPQ9H4A4 650 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 RRAGCQ9HB90 399 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 PACSIN2Q9UNF0 486 aaPredicted RBP12.67□□□□□ -0.38
SMAD3-202ENST00000439724 EVPLQ92817 2033 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 SLC15A5A6NIM6 579 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 TTLL13PA6NNM8 815 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 ACKR2O00590 384 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 MTA2O94776 668 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 FTLP02792 175 aaPredicted RBP12.67□□□□□ -0.38
SMAD3-202ENST00000439724 HOXD8P13378 290 aaPredicted RBP12.67□□□□□ -0.38
SMAD3-202ENST00000439724 INSRRP14616 1297 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 ADCYAP1R1P41586 468 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 BIRC3Q13489 604 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 BEND6Q5SZJ8 279 aaPredicted RBP12.67□□□□□ -0.38
SMAD3-202ENST00000439724 GJC2Q5T442 439 aaPredicted RBP12.67□□□□□ -0.38
SMAD3-202ENST00000439724 TSHZ1Q6ZSZ6 1077 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 PEX26Q7Z412 305 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 DPP9Q86TI2 863 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 IFNLR1Q8IU57 520 aaPredicted RBP12.67□□□□□ -0.38
SMAD3-202ENST00000439724 RHPN2Q8IUC4 686 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 WDR49Q8IV35 697 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 KRT222Q8N1A0 295 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 MSL3Q8N5Y2 521 aaKnown RBP12.67□□□□□ -0.38
SMAD3-202ENST00000439724 AFG1LQ8WV93 481 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 UBE2Q2Q8WVN8 375 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 DDX1Q92499 740 aaKnown RBP12.67□□□□□ -0.38
SMAD3-202ENST00000439724 FUT8Q9BYC5 575 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 PTPRHQ9HD43 1115 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 OSGEPQ9NPF4 335 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.67□□□□□ -0.388e-7■■■■■ 256.9
SMAD3-202ENST00000439724 EHD2Q9NZN4 543 aa12.67□□□□□ -0.38
SMAD3-202ENST00000439724 SPDYE4A6NLX3 237 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 TULP1O00294 542 aaPredicted RBP12.66□□□□□ -0.38
SMAD3-202ENST00000439724 BUB1BO60566 1050 aaPredicted RBP12.66□□□□□ -0.38
SMAD3-202ENST00000439724 PPFIA4O75335 1185 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 MMEP08473 750 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 TBXAS1P24557 533 aaPredicted RBP12.66□□□□□ -0.38
SMAD3-202ENST00000439724 CLCN3P51790 818 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 MBTD1Q05BQ5 628 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 IRF5Q13568 498 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 FAM187BQ17R55 369 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 DUSP28Q4G0W2 176 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 TAF3Q5VWG9 929 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 SMYD5Q6GMV2 418 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 C11orf63Q6NUN7 778 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 MPZL3Q6UWV2 235 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 DAAM2Q86T65 1068 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 ZNF677Q86XU0 584 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 ACTRT1Q8TDG2 376 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 HES6Q96HZ4 224 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 MS4A14Q96JA4 679 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 FAM84AQ96KN4 292 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 NLRP4Q96MN2 994 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 TINF2Q9BSI4 451 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 C16orf70Q9BSU1 422 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 TCHPQ9BT92 498 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 SELENOOQ9BVL4 669 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 ABHD16BQ9H3Z7 469 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 GOLPH3Q9H4A6 298 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 ZCCHC17Q9NP64 241 aaKnown RBP12.66□□□□□ -0.38
SMAD3-202ENST00000439724 RNF216Q9NWF9 866 aaPredicted RBP12.66□□□□□ -0.38
SMAD3-202ENST00000439724 SMARCAL1Q9NZC9 954 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 CPSF3Q9UKF6 684 aaKnown RBP12.66□□□□□ -0.38
SMAD3-202ENST00000439724 AMFRQ9UKV5 643 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 ANK1P16157 1881 aa12.66□□□□□ -0.38
SMAD3-202ENST00000439724 KCNK3O14649 394 aa12.65□□□□□ -0.38
SMAD3-202ENST00000439724 CLTAP09496 248 aa12.65□□□□□ -0.38
SMAD3-202ENST00000439724 HARSP12081 509 aaKnown RBP12.65□□□□□ -0.38
SMAD3-202ENST00000439724 KRT5P13647 590 aa12.65□□□□□ -0.38
SMAD3-202ENST00000439724 TNFSF9P41273 254 aa12.65□□□□□ -0.38
SMAD3-202ENST00000439724 PHKA2P46019 1235 aa12.65□□□□□ -0.38
SMAD3-202ENST00000439724 BPIFB4P59827 614 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms