RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 EMSYQ7Z589 1322 aa4.34□□□□□ -1.71
HMGB1P37-201ENST00000439613 MGAMO43451 1857 aa4.34□□□□□ -1.71
HMGB1P37-201ENST00000439613 EVPLQ92817 2033 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 COL1A2P08123 1366 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 DENND3A2RUS2 1198 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 GTPBP10A4D1E9 387 aaKnown RBP4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 GOLGA6L9A6NEM1 432 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 TGFBR3LH3BV60 316 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 KIF2AO00139 706 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 TNPO2O14787 897 aaKnown RBP4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 SLC16A4O15374 487 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 MAGEB2O15479 319 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 ASAP2O43150 1006 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 ARHGAP6O43182 974 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 TGFB1I1O43294 461 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 ZSCAN12O43309 604 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 HBP1O60381 514 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 EXOC3O60645 756 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 N4BP1O75113 896 aaKnown RBP4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 MICAL2O94851 1124 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 ARIH2O95376 493 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 SNAI1O95863 264 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 AFPP02771 609 aaKnown RBP4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 TUBB4AP04350 444 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 FAM157BP0CG42 384 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 KRT13P13646 458 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 TRIM21P19474 475 aaKnown RBP4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 ARL2P36404 184 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 GMPRP36959 345 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 NAMPTP43490 491 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 EIF1AXP47813 144 aaKnown RBP4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 NPTX2P47972 431 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 FCGRTP55899 365 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 PEX3P56589 373 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 ZBED6P86452 979 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 CDC42EP1Q00587 391 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 TNFAIP2Q03169 654 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 ENPEPQ07075 957 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 RBL2Q08999 1139 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 CETN1Q12798 172 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 LRMPQ12912 555 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 STRN3Q13033 797 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 TFDP1Q14186 410 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 KIF22Q14807 665 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 NOLC1Q14978 699 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 TARBP2Q15633 366 aaKnown RBP4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 DGKDQ16760 1214 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 ZC2HC1CQ53FD0 456 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 MIIPQ5JXC2 388 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 LCE2AQ5TA79 106 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 LCE2CQ5TA81 110 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 SLFN12LQ6IEE8 588 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 ARMCX5Q6P1M9 558 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 CYP26C1Q6V0L0 522 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 INTS8Q75QN2 995 aaKnown RBP4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 BTLAQ7Z6A9 289 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 TMTC1Q8IUR5 882 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 FMNL3Q8IVF7 1028 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 TRIM59Q8IWR1 403 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 FBXO16Q8IX29 292 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 FAM186BQ8IYM0 893 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 TC2NQ8N9U0 490 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 TMEM161BQ8NDZ6 487 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 NEK11Q8NG66 645 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 OR8K1Q8NGG5 319 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 DEPTORQ8TB45 409 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 GPR152Q8TDT2 470 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 PRPF31Q8WWY3 499 aaKnown RBP4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 USP6NLQ92738 828 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 FIZ1Q96SL8 496 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 PCYT2Q99447 389 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 DNAJC7Q99615 494 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 APBA2Q99767 749 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 BAG1Q99933 345 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 FGFBP2Q9BYJ0 223 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 KATNBL1Q9H079 304 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 POLR3FQ9H1D9 316 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 C2orf40Q9H1Z8 148 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 KCNF1Q9H3M0 494 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 TMX1Q9H3N1 280 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 KIAA1586Q9HCI6 787 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 POLD4Q9HCU8 107 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 PDGFCQ9NRA1 345 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 AGPAT3Q9NRZ7 376 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 SPTLC3Q9NUV7 552 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 DMAC2Q9NW81 257 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 DMGDHQ9UI17 866 aaKnown RBP4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 HCN2Q9UL51 889 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 ZNF215Q9UL58 517 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 CAPN11Q9UMQ6 739 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 TBX20Q9UMR3 447 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 Q9Y3F1 56 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 DAAM1Q9Y4D1 1078 aa4.33□□□□□ -1.72
HMGB1P37-201ENST00000439613 ZMYM2Q9UBW7 1377 aa4.32□□□□□ -1.72
HMGB1P37-201ENST00000439613 IGKV6-21A0A0C4DH24 114 aa4.32□□□□□ -1.72
HMGB1P37-201ENST00000439613 TMEM150BA6NC51 233 aa4.32□□□□□ -1.72
HMGB1P37-201ENST00000439613 RRN3P2A6NIE6 340 aa4.32□□□□□ -1.72
HMGB1P37-201ENST00000439613 RASSF10A6NK89 507 aa4.32□□□□□ -1.72
HMGB1P37-201ENST00000439613 K7ERI5 159 aa4.32□□□□□ -1.72
HMGB1P37-201ENST00000439613 HNRNPDLO14979 420 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms