RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 RMDN2Q96LZ7 410 aa15.85■□□□□ 0.13
TSC2-206ENST00000439117 FAM49AQ9H0Q0 323 aaPredicted RBP15.85■□□□□ 0.13
TSC2-206ENST00000439117 SNX25Q9H3E2 840 aa15.85■□□□□ 0.13
TSC2-206ENST00000439117 LRRIQ3A6PVS8 624 aaPredicted RBP15.84■□□□□ 0.13
TSC2-206ENST00000439117 H3BRJ5 948 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 PRR29P0C7W0 189 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 GNAT1P11488 350 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 GYS1P13807 737 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 DPEP1P16444 411 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 QARSP47897 775 aaKnown RBP15.84■□□□□ 0.13
TSC2-206ENST00000439117 KCNH2Q12809 1159 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 TRIP10Q15642 601 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 PDXDC1Q6P996 788 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 GUF1Q8N442 669 aaKnown RBP15.84■□□□□ 0.13
TSC2-206ENST00000439117 KIF2BQ8N4N8 673 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 OR9Q1Q8NGQ5 310 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 DEPDC5O75140 1603 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 GOLGA8IPA6NC78 632 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 GOLGA8JA6NMD2 632 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 C16orf96A6NNT2 1141 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 NDUFB10O96000 172 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 COPB2P35606 906 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 PMS1P54277 932 aaKnown RBP15.84■□□□□ 0.13
TSC2-206ENST00000439117 ITIH4Q14624 930 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 NR1I3Q14994 352 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 PPP1R16BQ96T49 567 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 RPF1Q9H9Y2 349 aaKnown RBP15.84■□□□□ 0.13
TSC2-206ENST00000439117 GPR75-ASB3A0A0A6YYF3 556 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 FAM47DPA6NHR8 397 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 LDHAP00338 332 aaKnown RBP15.84■□□□□ 0.13
TSC2-206ENST00000439117 RAD9BQ6WBX8 426 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 FASTKD5Q7L8L6 764 aaKnown RBP15.84■□□□□ 0.13
TSC2-206ENST00000439117 PSPC1Q8WXF1 523 aaKnown RBP15.84■□□□□ 0.13
TSC2-206ENST00000439117 CHP1Q99653 195 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 PPLO60437 1756 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 CASP1P29466 404 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 ATP2C1P98194 919 aaPredicted RBP15.84■□□□□ 0.13
TSC2-206ENST00000439117 EZH2Q15910 746 aaKnown RBP15.84■□□□□ 0.13
TSC2-206ENST00000439117 PPM1NQ8N819 430 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 LPAR1Q92633 364 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 ZBTB18Q99592 522 aa15.84■□□□□ 0.13
TSC2-206ENST00000439117 KIF28PB7ZC32 967 aa15.83■□□□□ 0.13
TSC2-206ENST00000439117 NQO1P15559 274 aaKnown RBP15.83■□□□□ 0.13
TSC2-206ENST00000439117 AARSP49588 968 aaKnown RBP eCLIP15.83■□□□□ 0.13
TSC2-206ENST00000439117 ZCWPW2Q504Y3 356 aa15.83■□□□□ 0.13
TSC2-206ENST00000439117 KAZALD1Q96I82 304 aa15.83■□□□□ 0.13
TSC2-206ENST00000439117 TMCC1O94876 653 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 RASA1P20936 1047 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 SCP2P22307 547 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 RAP1GDS1P52306 607 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 KDSRQ06136 332 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 ADRM1Q16186 407 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 TRIM60Q495X7 471 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 METTL23Q86XA0 190 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 SNRNP27Q8WVK2 155 aaKnown RBP15.83■□□□□ 0.12
TSC2-206ENST00000439117 TUBE1Q9UJT0 475 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 UBTFL6P0CB48 400 aaPredicted RBP15.83■□□□□ 0.12
TSC2-206ENST00000439117 SCTRP47872 440 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 PDIA2Q13087 525 aaKnown RBP15.83■□□□□ 0.12
TSC2-206ENST00000439117 TTLL4Q14679 1199 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 CATSPER4Q7RTX7 472 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 RBM46Q8TBY0 533 aaKnown RBP15.83■□□□□ 0.12
TSC2-206ENST00000439117 RAPGEF5Q92565 580 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 FAM149B1Q96BN6 582 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 ISCUQ9H1K1 167 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 LRFN2Q9ULH4 789 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 MTO1Q9Y2Z2 717 aaKnown RBP15.83■□□□□ 0.12
TSC2-206ENST00000439117 MROH2AA6NES4 1674 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 FGFR4P22455 802 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 MTMR2Q13614 643 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 SLC12A1Q13621 1099 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 IZUMO3Q5VZ72 239 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 DDHD1Q8NEL9 900 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 DDI1Q8WTU0 396 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 PBXIP1Q96AQ6 731 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 HEMGNQ9BXL5 484 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 ADAM22Q9P0K1 906 aa15.83■□□□□ 0.12
TSC2-206ENST00000439117 FCER1AP12319 257 aa15.82■□□□□ 0.12
TSC2-206ENST00000439117 KCNB1Q14721 858 aa15.82■□□□□ 0.12
TSC2-206ENST00000439117 METTL16Q86W50 562 aaKnown RBP15.82■□□□□ 0.12
TSC2-206ENST00000439117 NAF1Q96HR8 494 aaKnown RBP15.82■□□□□ 0.12
TSC2-206ENST00000439117 BLOC1S6Q9UL45 172 aa15.82■□□□□ 0.12
TSC2-206ENST00000439117 COG2Q14746 738 aa15.82■□□□□ 0.12
TSC2-206ENST00000439117 MYLK4Q86YV6 388 aaPredicted RBP15.82■□□□□ 0.12
TSC2-206ENST00000439117 ZBED8Q8IZ13 594 aa15.82■□□□□ 0.12
TSC2-206ENST00000439117 TSSK1BQ9BXA7 367 aa15.82■□□□□ 0.12
TSC2-206ENST00000439117 FOXP3Q9BZS1 431 aa15.82■□□□□ 0.12
TSC2-206ENST00000439117 KDM6AO15550 1401 aaPredicted RBP15.82■□□□□ 0.12
TSC2-206ENST00000439117 ARHGEF37A1IGU5 675 aa15.82■□□□□ 0.12
TSC2-206ENST00000439117 ENO1P06733 434 aaKnown RBP15.82■□□□□ 0.12
TSC2-206ENST00000439117 RFX1P22670 979 aa15.82■□□□□ 0.12
TSC2-206ENST00000439117 SERPINB1P30740 379 aa15.82■□□□□ 0.12
TSC2-206ENST00000439117 CDR2LQ86X02 465 aaPredicted RBP15.82■□□□□ 0.12
TSC2-206ENST00000439117 ZNF564Q8TBZ8 553 aaPredicted RBP15.82■□□□□ 0.12
TSC2-206ENST00000439117 RBM12Q9NTZ6 932 aaKnown RBP15.82■□□□□ 0.12
TSC2-206ENST00000439117 SUCLA2Q9P2R7 463 aaPredicted RBP15.82■□□□□ 0.12
TSC2-206ENST00000439117 POTEFA5A3E0 1075 aa15.82■□□□□ 0.12
TSC2-206ENST00000439117 POTEIP0CG38 1075 aa15.82■□□□□ 0.12
TSC2-206ENST00000439117 CARSP49589 748 aaKnown RBP15.82■□□□□ 0.12
TSC2-206ENST00000439117 CCDC15Q0P6D6 951 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms