RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 PPFIA1Q13136 1202 aa9.99□□□□□ -0.81
LSMEM1-202ENST00000439068 LPIN1Q14693 890 aa9.99□□□□□ -0.81
LSMEM1-202ENST00000439068 SART3Q15020 963 aaKnown RBP9.99□□□□□ -0.81
LSMEM1-202ENST00000439068 SPOUT1Q5T280 376 aaKnown RBP9.99□□□□□ -0.81
LSMEM1-202ENST00000439068 TSHZ1Q6ZSZ6 1077 aa9.99□□□□□ -0.81
LSMEM1-202ENST00000439068 RBM23Q86U06 439 aaKnown RBP9.99□□□□□ -0.81
LSMEM1-202ENST00000439068 MAP4K3Q8IVH8 894 aa9.99□□□□□ -0.81
LSMEM1-202ENST00000439068 FMR1NBQ8N0W7 255 aaPredicted RBP9.99□□□□□ -0.81
LSMEM1-202ENST00000439068 IL31RAQ8NI17 732 aa9.99□□□□□ -0.81
LSMEM1-202ENST00000439068 SMARCC2Q8TAQ2 1214 aa9.99□□□□□ -0.81
LSMEM1-202ENST00000439068 SPPL3Q8TCT6 385 aa9.99□□□□□ -0.81
LSMEM1-202ENST00000439068 CPLX3Q8WVH0 158 aa9.99□□□□□ -0.81
LSMEM1-202ENST00000439068 POF1BQ8WVV4 589 aa9.99□□□□□ -0.81
LSMEM1-202ENST00000439068 ATOH1Q92858 354 aaPredicted RBP9.99□□□□□ -0.81
LSMEM1-202ENST00000439068 PLPPR2Q96GM1 343 aa9.99□□□□□ -0.81
LSMEM1-202ENST00000439068 MSLNLQ96KJ4 702 aa9.99□□□□□ -0.81
LSMEM1-202ENST00000439068 RPGRIP1Q96KN7 1286 aa9.99□□□□□ -0.81
LSMEM1-202ENST00000439068 SMARCAD1Q9H4L7 1026 aa9.99□□□□□ -0.81
LSMEM1-202ENST00000439068 ENAMQ9NRM1 1142 aa9.99□□□□□ -0.81
LSMEM1-202ENST00000439068 KRT82Q9NSB4 513 aa9.99□□□□□ -0.81
LSMEM1-202ENST00000439068 MAD2L2Q9UI95 211 aa9.99□□□□□ -0.81
LSMEM1-202ENST00000439068 TUBE1Q9UJT0 475 aa9.99□□□□□ -0.81
LSMEM1-202ENST00000439068 MYH7BA7E2Y1 1941 aa9.99□□□□□ -0.81
LSMEM1-202ENST00000439068 LINC01565O15544 149 aa9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 PPP1R11O60927 126 aaPredicted RBP9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 TBX10O75333 385 aa9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 STK10O94804 968 aaKnown RBP9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 TCF7P36402 384 aaPredicted RBP9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 MRPS9P82933 396 aaKnown RBP9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 UBE3AQ05086 875 aa9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 GRIK4Q16099 956 aa9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 FBXO47Q5MNV8 452 aa9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 WIPI1Q5MNZ9 446 aaPredicted RBP9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 ODR4Q5SWX8 454 aa9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 FBXW10Q5XX13 1052 aa9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 CATIPQ7Z7H3 387 aa9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 SMRP1Q8NCR6 262 aa9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 PRSS33Q8NF86 280 aa9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 DNAJB3Q8WWF6 145 aa9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 ANAPC16Q96DE5 110 aa9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 PIGSQ96S52 555 aa9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 CDCA3Q99618 268 aaPredicted RBP9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 AZI2Q9H6S1 392 aa9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 BCAS3Q9H6U6 928 aa9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 RIOX1Q9H6W3 641 aa9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 PUF60Q9UHX1 559 aaKnown RBP9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 PCDHB7Q9Y5E2 793 aa9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 CDY2AQ9Y6F7 541 aa9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 WDFY4Q6ZS81 3184 aa9.98□□□□□ -0.81
LSMEM1-202ENST00000439068 COL4A6Q14031 1691 aa9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 GFRA2O00451 464 aa9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 IFIT3O14879 490 aaKnown RBP9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 MAFGO15525 162 aa9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 ITGB1P05556 798 aa9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 ATF7P17544 494 aaPredicted RBP9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 LORP23490 312 aaPredicted RBP9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 AVPR2P30518 371 aa9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 MRPS6P82932 125 aaKnown RBP9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 HDAC1Q13547 482 aaPredicted RBP9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 COL9A2Q14055 689 aaPredicted RBP9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 CBX2Q14781 532 aaPredicted RBP9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 DUOXA2Q1HG44 320 aa9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 DPH6Q7L8W6 267 aa9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 C12orf40Q86WS4 652 aa9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 NME8Q8N427 588 aa9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 DTWD1Q8N5C7 304 aa9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 NEK1Q96PY6 1258 aa9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 SRRTQ9BXP5 876 aaKnown RBP9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 LNPKQ9C0E8 428 aa9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 CLEC1BQ9P126 229 aa9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 SEC63Q9UGP8 760 aaKnown RBP9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 USP15Q9Y4E8 981 aaPredicted RBP9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 PCDHB14Q9Y5E9 798 aa9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 CORINQ9Y5Q5 1042 aa9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 MRPL42Q9Y6G3 142 aaKnown RBP9.97□□□□□ -0.81
LSMEM1-202ENST00000439068 MBLAC1A4D2B0 266 aaPredicted RBP9.96□□□□□ -0.82
LSMEM1-202ENST00000439068 LINC00271P0C7V0 271 aa9.96□□□□□ -0.82
LSMEM1-202ENST00000439068 SCG2P13521 617 aa9.96□□□□□ -0.82
LSMEM1-202ENST00000439068 MARK3P27448 753 aa9.96□□□□□ -0.82
LSMEM1-202ENST00000439068 CD52P31358 61 aa9.96□□□□□ -0.82
LSMEM1-202ENST00000439068 KIF5BP33176 963 aa9.96□□□□□ -0.82
LSMEM1-202ENST00000439068 RAC1P63000 192 aa9.96□□□□□ -0.82
LSMEM1-202ENST00000439068 IGBP1P78318 339 aa9.96□□□□□ -0.82
LSMEM1-202ENST00000439068 MGAT3Q09327 533 aa9.96□□□□□ -0.82
LSMEM1-202ENST00000439068 TCF15Q12870 199 aa9.96□□□□□ -0.82
LSMEM1-202ENST00000439068 CAMK1Q14012 370 aa9.96□□□□□ -0.82
LSMEM1-202ENST00000439068 GRM4Q14833 912 aa9.96□□□□□ -0.82
LSMEM1-202ENST00000439068 WTAPQ15007 396 aa9.96□□□□□ -0.82
LSMEM1-202ENST00000439068 PAN2Q504Q3 1202 aaKnown RBP9.96□□□□□ -0.82
LSMEM1-202ENST00000439068 SCARA3Q6AZY7 606 aa9.96□□□□□ -0.82
LSMEM1-202ENST00000439068 RUFY4Q6ZNE9 571 aa9.96□□□□□ -0.82
LSMEM1-202ENST00000439068 RRP36Q96EU6 259 aaKnown RBP9.96□□□□□ -0.82
LSMEM1-202ENST00000439068 FERD3LQ96RJ6 166 aa9.96□□□□□ -0.82
LSMEM1-202ENST00000439068 FAM49AQ9H0Q0 323 aaPredicted RBP9.96□□□□□ -0.82
LSMEM1-202ENST00000439068 RWDD1Q9H446 243 aaPredicted RBP9.96□□□□□ -0.82
LSMEM1-202ENST00000439068 RC3H2Q9HBD1 1191 aaKnown RBP9.96□□□□□ -0.82
LSMEM1-202ENST00000439068 TLR9Q9NR96 1032 aa9.96□□□□□ -0.82
LSMEM1-202ENST00000439068 NR2E1Q9Y466 385 aa9.96□□□□□ -0.82
LSMEM1-202ENST00000439068 PTPRZ1P23471 2315 aaPredicted RBP9.95□□□□□ -0.82
LSMEM1-202ENST00000439068 TRIOO75962 3097 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms