RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 DHX38Q92620 1227 aaKnown RBP14.27□□□□□ -0.12
ACTN1-204ENST00000438964 HAUS1Q96CS2 278 aa14.27□□□□□ -0.12
ACTN1-204ENST00000438964 RUNDC3BQ96NL0 473 aa14.27□□□□□ -0.12
ACTN1-204ENST00000438964 SERPINB12Q96P63 405 aa14.27□□□□□ -0.12
ACTN1-204ENST00000438964 CYTH2Q99418 400 aa14.27□□□□□ -0.12
ACTN1-204ENST00000438964 ANO3Q9BYT9 981 aa14.27□□□□□ -0.12
ACTN1-204ENST00000438964 LRMDAQ9H2I8 198 aa14.27□□□□□ -0.12
ACTN1-204ENST00000438964 PARP2Q9UGN5 583 aa14.27□□□□□ -0.12
ACTN1-204ENST00000438964 DCCP43146 1447 aa14.27□□□□□ -0.13
ACTN1-204ENST00000438964 EMSYQ7Z589 1322 aa14.27□□□□□ -0.13
ACTN1-204ENST00000438964 PIK3CAP42336 1068 aa14.27□□□□□ -0.13
ACTN1-204ENST00000438964 GPC5P78333 572 aa14.27□□□□□ -0.13
ACTN1-204ENST00000438964 IL9RQ01113 521 aa14.27□□□□□ -0.13
ACTN1-204ENST00000438964 IKQ13123 557 aaPredicted RBP14.27□□□□□ -0.13
ACTN1-204ENST00000438964 C16orf86Q6ZW13 317 aa14.27□□□□□ -0.13
ACTN1-204ENST00000438964 ZNF804AQ7Z570 1209 aa14.27□□□□□ -0.13
ACTN1-204ENST00000438964 NOP9Q86U38 636 aaKnown RBP14.27□□□□□ -0.13
ACTN1-204ENST00000438964 B4GALNT2Q8NHY0 566 aa14.27□□□□□ -0.13
ACTN1-204ENST00000438964 MTMR4Q9NYA4 1195 aa14.27□□□□□ -0.13
ACTN1-204ENST00000438964 ARMCX1Q9P291 453 aa14.27□□□□□ -0.13
ACTN1-204ENST00000438964 ZFP69BQ9UJL9 534 aa14.27□□□□□ -0.13
ACTN1-204ENST00000438964 ZMYM2Q9UBW7 1377 aa14.27□□□□□ -0.13
ACTN1-204ENST00000438964 PNMA6FA0A0J9YX94 578 aa14.26□□□□□ -0.13
ACTN1-204ENST00000438964 EXOC1LA0A1B0GW35 172 aa14.26□□□□□ -0.13
ACTN1-204ENST00000438964 SYCP2LQ5T4T6 812 aa14.26□□□□□ -0.13
ACTN1-204ENST00000438964 KAZNQ674X7 775 aa14.26□□□□□ -0.13
ACTN1-204ENST00000438964 RNF43Q68DV7 783 aa14.26□□□□□ -0.13
ACTN1-204ENST00000438964 CADPS2Q86UW7 1296 aa14.26□□□□□ -0.13
ACTN1-204ENST00000438964 RFWD2Q8NHY2 731 aa14.26□□□□□ -0.13
ACTN1-204ENST00000438964 DYDC2Q96IM9 177 aa14.26□□□□□ -0.13
ACTN1-204ENST00000438964 SYT11Q9BT88 431 aa14.26□□□□□ -0.13
ACTN1-204ENST00000438964 RTFDC1Q9BY42 306 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-204ENST00000438964 RTN3O95197 1032 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-204ENST00000438964 ATF2P15336 505 aa14.26□□□□□ -0.13
ACTN1-204ENST00000438964 GSTA5Q7RTV2 222 aa14.26□□□□□ -0.13
ACTN1-204ENST00000438964 TTC7BQ86TV6 843 aa14.26□□□□□ -0.13
ACTN1-204ENST00000438964 NBPF5PQ86XG9 351 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-204ENST00000438964 ZC3H3Q8IXZ2 948 aaKnown RBP14.26□□□□□ -0.13
ACTN1-204ENST00000438964 KBTBD2Q8IY47 623 aa14.26□□□□□ -0.13
ACTN1-204ENST00000438964 FGD4Q96M96 766 aa14.26□□□□□ -0.13
ACTN1-204ENST00000438964 SHANK3Q9BYB0 1731 aa14.26□□□□□ -0.13
ACTN1-204ENST00000438964 UBE2OQ9C0C9 1292 aaKnown RBP14.26□□□□□ -0.13
ACTN1-204ENST00000438964 METTL14Q9HCE5 456 aaKnown RBP14.26□□□□□ -0.13
ACTN1-204ENST00000438964 USTQ9Y2C2 406 aa14.26□□□□□ -0.13
ACTN1-204ENST00000438964 RABGAP1Q9Y3P9 1069 aa14.26□□□□□ -0.13
ACTN1-204ENST00000438964 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.25□□□□□ -0.13
ACTN1-204ENST00000438964 ESYT2A0FGR8 921 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 FAM47DPA6NHR8 397 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 MAPK13O15264 365 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 ALDH3A1P30838 453 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 CACNA2D1P54289 1103 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 MRPS35P82673 323 aaKnown RBP14.25□□□□□ -0.13
ACTN1-204ENST00000438964 ROR2Q01974 943 aaKnown RBP14.25□□□□□ -0.13
ACTN1-204ENST00000438964 EFTUD2Q15029 972 aaKnown RBP eCLIP14.25□□□□□ -0.132e-6■■■■□ 20.8
ACTN1-204ENST00000438964 QRICH1Q2TAL8 776 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 ACSBG2Q5FVE4 666 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 SPDYCQ5MJ68 293 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 TRMT10CQ7L0Y3 403 aaKnown RBP14.25□□□□□ -0.13
ACTN1-204ENST00000438964 ANKMY2Q8IV38 441 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 SLC25A41Q8N5S1 370 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 MKNK1Q9BUB5 465 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 C10orf88Q9H8K7 445 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 VPS37BQ9H9H4 285 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 SAYSD1Q9NPB0 183 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 USH1CQ9Y6N9 552 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 LAMB1P07942 1786 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 ANKRD33BA6NCL7 494 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 DDX39AO00148 427 aaKnown RBP14.25□□□□□ -0.13
ACTN1-204ENST00000438964 TBX10O75333 385 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 RNF8O76064 485 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 ALAS1P13196 640 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 NOP14P78316 857 aaKnown RBP14.25□□□□□ -0.13
ACTN1-204ENST00000438964 CDR2Q01850 454 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 NLRP9Q7RTR0 991 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 CCDC125Q86Z20 511 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 SYT2Q8N9I0 419 aaPredicted RBP14.25□□□□□ -0.13
ACTN1-204ENST00000438964 KIFAP3Q92845 792 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 CCDC127Q96BQ5 260 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 ACSF2Q96CM8 615 aaPredicted RBP14.25□□□□□ -0.13
ACTN1-204ENST00000438964 CADM1Q9BY67 442 aaKnown RBP14.25□□□□□ -0.13
ACTN1-204ENST00000438964 ROPN1BQ9BZX4 212 aaPredicted RBP14.25□□□□□ -0.13
ACTN1-204ENST00000438964 ROPN1Q9HAT0 212 aaPredicted RBP14.25□□□□□ -0.13
ACTN1-204ENST00000438964 ARL8BQ9NVJ2 186 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 WDR35Q9P2L0 1181 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 ITGB4P16144 1822 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 PI4K2BG5E9Z4 385 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 BMP3P12645 472 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 ARHGAP4P98171 946 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 PPP3CAQ08209 521 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 OR52E8Q6IFG1 317 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 OTOAQ7RTW8 1153 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 EZH1Q92800 747 aaPredicted RBP14.25□□□□□ -0.13
ACTN1-204ENST00000438964 BORCS6Q96GS4 357 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 ZNF333Q96JL9 665 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 TMEM109Q9BVC6 243 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 TRABDQ9H4I3 376 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 FRMD4BQ9Y2L6 1034 aa14.25□□□□□ -0.13
ACTN1-204ENST00000438964 USP1O94782 785 aa14.24□□□□□ -0.13
ACTN1-204ENST00000438964 SPATA31D3P0C874 917 aa14.24□□□□□ -0.13
ACTN1-204ENST00000438964 ZNF76P36508 570 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms