RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 PSMA7O14818 248 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 TGFB1I1O43294 461 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 DNAJB2P25686 324 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 LRPAP1P30533 357 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 BMPR1AP36894 532 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 CLDN10P78369 228 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 CREMQ03060 361 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 PPP2R3AQ06190 1150 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 ELAVL2Q12926 359 aaKnown RBP12.49□□□□□ -0.41
SNHG3-202ENST00000437681 BTG3Q14201 252 aaPredicted RBP12.49□□□□□ -0.41
SNHG3-202ENST00000437681 TMC2Q8TDI7 906 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 NOC3LQ8WTT2 800 aaKnown RBP12.49□□□□□ -0.41
SNHG3-202ENST00000437681 CLGNO14967 610 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 STX10O60499 249 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 CAVIN2O95810 425 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 GNA14O95837 355 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 EFEMP2O95967 443 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 CCNE1P24864 410 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 ERCC5P28715 1186 aaPredicted RBP12.49□□□□□ -0.41
SNHG3-202ENST00000437681 MRE11P49959 708 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 CASP5P51878 434 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 TAP1Q03518 808 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 TUSC3Q13454 348 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 ZBTB6Q15916 424 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 ZC2HC1CQ53FD0 456 aaPredicted RBP12.49□□□□□ -0.41
SNHG3-202ENST00000437681 ARMCX5Q6P1M9 558 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 GRAMD1CQ8IYS0 662 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 XXYLT1Q8NBI6 393 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 CACTINQ8WUQ7 758 aaKnown RBP12.49□□□□□ -0.41
SNHG3-202ENST00000437681 POMGNT1Q8WZA1 660 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 STAMQ92783 540 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 MFSD14AQ96MC6 490 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 ZNF558Q96NG5 402 aa12.49□□□□□ -0.41
SNHG3-202ENST00000437681 GZF1Q9H116 711 aaPredicted RBP12.49□□□□□ -0.41
SNHG3-202ENST00000437681 UBQLN1Q9UMX0 589 aaKnown RBP12.49□□□□□ -0.41
SNHG3-202ENST00000437681 TNRC18O15417 2968 aaPredicted RBP12.49□□□□□ -0.41
SNHG3-202ENST00000437681 TBKBP1A7MCY6 615 aa12.48□□□□□ -0.41
SNHG3-202ENST00000437681 PMM2O15305 246 aa12.48□□□□□ -0.41
SNHG3-202ENST00000437681 RECQL4O94761 1208 aa12.48□□□□□ -0.41
SNHG3-202ENST00000437681 PRPF6O94906 941 aaKnown RBP12.48□□□□□ -0.41
SNHG3-202ENST00000437681 THP07101 528 aa12.48□□□□□ -0.41
SNHG3-202ENST00000437681 ADSSP30520 456 aa12.48□□□□□ -0.41
SNHG3-202ENST00000437681 GTF2H1P32780 548 aa12.48□□□□□ -0.41
SNHG3-202ENST00000437681 ZNF697Q5TEC3 545 aa12.48□□□□□ -0.41
SNHG3-202ENST00000437681 COLGALT1Q8NBJ5 622 aa12.48□□□□□ -0.41
SNHG3-202ENST00000437681 TCHPQ9BT92 498 aa12.48□□□□□ -0.41
SNHG3-202ENST00000437681 COLEC11Q9BWP8 271 aa12.48□□□□□ -0.41
SNHG3-202ENST00000437681 SLC39A2Q9NP94 309 aa12.48□□□□□ -0.41
SNHG3-202ENST00000437681 ZNF233A6NK53 670 aa12.48□□□□□ -0.41
SNHG3-202ENST00000437681 ANKRD63C9JTQ0 380 aa12.48□□□□□ -0.41
SNHG3-202ENST00000437681 H3BNC9 293 aa12.48□□□□□ -0.41
SNHG3-202ENST00000437681 STAU1O95793 577 aaKnown RBP12.48□□□□□ -0.41
SNHG3-202ENST00000437681 NLRP12P59046 1061 aa12.48□□□□□ -0.41
SNHG3-202ENST00000437681 BMS1Q14692 1282 aaKnown RBP12.48□□□□□ -0.41
SNHG3-202ENST00000437681 PSMD6Q15008 389 aa12.48□□□□□ -0.41
SNHG3-202ENST00000437681 NAB2Q15742 525 aa12.48□□□□□ -0.41
SNHG3-202ENST00000437681 TMEM192Q8IY95 271 aa12.48□□□□□ -0.41
SNHG3-202ENST00000437681 COLGALT2Q8IYK4 626 aa12.48□□□□□ -0.41
SNHG3-202ENST00000437681 GPT2Q8TD30 523 aa12.48□□□□□ -0.41
SNHG3-202ENST00000437681 ZNF668Q96K58 619 aaPredicted RBP12.48□□□□□ -0.41
SNHG3-202ENST00000437681 NXF3Q9H4D5 531 aaKnown RBP12.48□□□□□ -0.41
SNHG3-202ENST00000437681 SLC28A3Q9HAS3 691 aa12.48□□□□□ -0.41
SNHG3-202ENST00000437681 TBC1D13Q9NVG8 400 aa12.48□□□□□ -0.41
SNHG3-202ENST00000437681 HSPBP1Q9NZL4 362 aa12.48□□□□□ -0.41
SNHG3-202ENST00000437681 YBX2Q9Y2T7 364 aaKnown RBP12.48□□□□□ -0.41
SNHG3-202ENST00000437681 CSDE1O75534 798 aaKnown RBP12.47□□□□□ -0.41
SNHG3-202ENST00000437681 MARSP56192 900 aaKnown RBP12.47□□□□□ -0.41
SNHG3-202ENST00000437681 PTPROQ16827 1216 aa12.47□□□□□ -0.41
SNHG3-202ENST00000437681 HELQQ8TDG4 1101 aa12.47□□□□□ -0.41
SNHG3-202ENST00000437681 FAM193BQ96PV7 902 aaPredicted RBP12.47□□□□□ -0.41
SNHG3-202ENST00000437681 HAPLN2Q9GZV7 340 aa12.47□□□□□ -0.41
SNHG3-202ENST00000437681 SNTG2Q9NY99 539 aa12.47□□□□□ -0.41
SNHG3-202ENST00000437681 RWDD2AQ9UIY3 292 aa12.47□□□□□ -0.41
SNHG3-202ENST00000437681 MAFFQ9ULX9 164 aa12.47□□□□□ -0.41
SNHG3-202ENST00000437681 TTLL13PA6NNM8 815 aa12.47□□□□□ -0.41
SNHG3-202ENST00000437681 IKBKBO14920 756 aa12.47□□□□□ -0.41
SNHG3-202ENST00000437681 NCK2O43639 380 aa12.47□□□□□ -0.41
SNHG3-202ENST00000437681 PPP2R2DQ66LE6 453 aa12.47□□□□□ -0.41
SNHG3-202ENST00000437681 DCLRE1AQ6PJP8 1040 aa12.47□□□□□ -0.41
SNHG3-202ENST00000437681 RTL10Q7L3V2 364 aa12.47□□□□□ -0.41
SNHG3-202ENST00000437681 DDX53Q86TM3 631 aaKnown RBP12.47□□□□□ -0.41
SNHG3-202ENST00000437681 WDR49Q8IV35 697 aa12.47□□□□□ -0.41
SNHG3-202ENST00000437681 RNF168Q8IYW5 571 aaPredicted RBP12.47□□□□□ -0.41
SNHG3-202ENST00000437681 SLC39A11Q8N1S5 342 aa12.47□□□□□ -0.41
SNHG3-202ENST00000437681 GSTCDQ8NEC7 633 aa12.47□□□□□ -0.41
SNHG3-202ENST00000437681 FBXO22Q8NEZ5 403 aa12.47□□□□□ -0.41
SNHG3-202ENST00000437681 HERC2P3Q9BVR0 1158 aa12.47□□□□□ -0.41
SNHG3-202ENST00000437681 NKX2-4Q9H2Z4 354 aa12.47□□□□□ -0.41
SNHG3-202ENST00000437681 METTL14Q9HCE5 456 aaKnown RBP12.47□□□□□ -0.41
SNHG3-202ENST00000437681 SPG21Q9NZD8 308 aa12.47□□□□□ -0.41
SNHG3-202ENST00000437681 MRPL42Q9Y6G3 142 aaKnown RBP12.47□□□□□ -0.41
SNHG3-202ENST00000437681 PNPLA4P41247 253 aa12.46□□□□□ -0.41
SNHG3-202ENST00000437681 FKBP3Q00688 224 aaKnown RBP12.46□□□□□ -0.41
SNHG3-202ENST00000437681 SLC10A6Q3KNW5 377 aa12.46□□□□□ -0.41
SNHG3-202ENST00000437681 CRELD2Q6UXH1 353 aaPredicted RBP12.46□□□□□ -0.41
SNHG3-202ENST00000437681 INTS8Q75QN2 995 aaKnown RBP12.46□□□□□ -0.41
SNHG3-202ENST00000437681 FILIP1Q7Z7B0 1213 aa12.46□□□□□ -0.41
SNHG3-202ENST00000437681 BEST2Q8NFU1 509 aa12.46□□□□□ -0.41
SNHG3-202ENST00000437681 PARP2Q9UGN5 583 aa12.46□□□□□ -0.41
SNHG3-202ENST00000437681 PPP1R3GB7ZBB8 358 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms