RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 ABCB4P21439 1286 aa27.66■■■□□ 2.02
CPNE1-216ENST00000437340 PDE6CP51160 858 aa27.66■■■□□ 2.02
CPNE1-216ENST00000437340 FAM110CQ1W6H9 321 aa27.66■■■□□ 2.02
CPNE1-216ENST00000437340 TAPT1Q6NXT6 567 aa27.66■■■□□ 2.02
CPNE1-216ENST00000437340 HDXQ7Z353 690 aa27.66■■■□□ 2.02
CPNE1-216ENST00000437340 DAAM2Q86T65 1068 aa27.66■■■□□ 2.02
CPNE1-216ENST00000437340 ZNF784Q8NCA9 323 aaPredicted RBP27.66■■■□□ 2.02
CPNE1-216ENST00000437340 TATDN2Q93075 761 aa27.66■■■□□ 2.02
CPNE1-216ENST00000437340 MS4A14Q96JA4 679 aa27.66■■■□□ 2.02
CPNE1-216ENST00000437340 ZIC5Q96T25 663 aa27.66■■■□□ 2.02
CPNE1-216ENST00000437340 SELENOOQ9BVL4 669 aa27.66■■■□□ 2.02
CPNE1-216ENST00000437340 THAP2Q9H0W7 228 aa27.66■■■□□ 2.02
CPNE1-216ENST00000437340 RNF216Q9NWF9 866 aaPredicted RBP27.66■■■□□ 2.02
CPNE1-216ENST00000437340 ERAP1Q9NZ08 941 aa27.66■■■□□ 2.02
CPNE1-216ENST00000437340 TRPC6Q9Y210 931 aa27.66■■■□□ 2.02
CPNE1-216ENST00000437340 IVNS1ABPQ9Y6Y0 642 aa27.66■■■□□ 2.02
CPNE1-216ENST00000437340 KCNK3O14649 394 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 FTLP02792 175 aaPredicted RBP27.65■■■□□ 2.02
CPNE1-216ENST00000437340 CYP11B1P15538 503 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 CDR2Q01850 454 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 ARHGAP1Q07960 439 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 GRM1Q13255 1194 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 TFDP1Q14186 410 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 TAF1CQ15572 869 aaPredicted RBP27.65■■■□□ 2.02
CPNE1-216ENST00000437340 TDRD10Q5VZ19 366 aaKnown RBP27.65■■■□□ 2.02
CPNE1-216ENST00000437340 NT5DC3Q86UY8 548 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 SLC47A2Q86VL8 602 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 RNF149Q8NC42 400 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 CNTNAP2Q9UHC6 1331 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 ASAP2O43150 1006 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 GH1P01241 217 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 HLA-DRAP01903 254 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 YY1P25490 414 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 AP3M2P53677 418 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 MAPK6Q16659 721 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 PAXIP1Q6ZW49 1069 aaPredicted RBP27.65■■■□□ 2.02
CPNE1-216ENST00000437340 ACTRT1Q8TDG2 376 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 UBE2Q2Q8WVN8 375 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 EMID1Q96A84 441 aaPredicted RBP27.65■■■□□ 2.02
CPNE1-216ENST00000437340 ARHGEF26Q96DR7 871 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 HES6Q96HZ4 224 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 ACO2Q99798 780 aaKnown RBP27.65■■■□□ 2.02
CPNE1-216ENST00000437340 OSGEPQ9NPF4 335 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.65■■■□□ 2.021e-6■■■■■ 117.8
CPNE1-216ENST00000437340 SMARCAL1Q9NZC9 954 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 EHD2Q9NZN4 543 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 CPA4Q9UI42 421 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 AMFRQ9UKV5 643 aa27.65■■■□□ 2.02
CPNE1-216ENST00000437340 PRKCBP05771 671 aa27.64■■■□□ 2.02
CPNE1-216ENST00000437340 PLA2G4AP47712 749 aa27.64■■■□□ 2.02
CPNE1-216ENST00000437340 INHBEP58166 350 aa27.64■■■□□ 2.02
CPNE1-216ENST00000437340 GPC5P78333 572 aa27.64■■■□□ 2.02
CPNE1-216ENST00000437340 FMO1Q01740 532 aa27.64■■■□□ 2.02
CPNE1-216ENST00000437340 CYP4F22Q6NT55 531 aa27.64■■■□□ 2.02
CPNE1-216ENST00000437340 BRSK2Q8IWQ3 736 aa27.64■■■□□ 2.02
CPNE1-216ENST00000437340 LRRC71Q8N4P6 559 aa27.64■■■□□ 2.02
CPNE1-216ENST00000437340 DHX38Q92620 1227 aaKnown RBP27.64■■■□□ 2.02
CPNE1-216ENST00000437340 PCDHB18PQ96TA0 734 aa27.64■■■□□ 2.02
CPNE1-216ENST00000437340 RBM12Q9NTZ6 932 aaKnown RBP27.64■■■□□ 2.02
CPNE1-216ENST00000437340 BUB1BO60566 1050 aaPredicted RBP27.63■■■□□ 2.01
CPNE1-216ENST00000437340 SRGAP2CP0DJJ0 459 aa27.63■■■□□ 2.01
CPNE1-216ENST00000437340 WNT7BP56706 349 aa27.63■■■□□ 2.01
CPNE1-216ENST00000437340 ZNF484Q5JVG2 852 aa27.63■■■□□ 2.01
CPNE1-216ENST00000437340 TMEM63BQ5T3F8 832 aa27.63■■■□□ 2.01
CPNE1-216ENST00000437340 MAMDC4Q6UXC1 1216 aa27.63■■■□□ 2.01
CPNE1-216ENST00000437340 GOLPH3Q9H4A6 298 aa27.63■■■□□ 2.01
CPNE1-216ENST00000437340 PIK3CAP42336 1068 aa27.63■■■□□ 2.01
CPNE1-216ENST00000437340 DNA2P51530 1060 aa27.63■■■□□ 2.01
CPNE1-216ENST00000437340 SREBF2Q12772 1141 aa27.63■■■□□ 2.01
CPNE1-216ENST00000437340 BIRC3Q13489 604 aa27.63■■■□□ 2.01
CPNE1-216ENST00000437340 ZBTB41Q5SVQ8 909 aa27.63■■■□□ 2.01
CPNE1-216ENST00000437340 USP38Q8NB14 1042 aa27.63■■■□□ 2.01
CPNE1-216ENST00000437340 PPTC7Q8NI37 304 aa27.63■■■□□ 2.01
CPNE1-216ENST00000437340 LRRC1Q9BTT6 524 aa27.63■■■□□ 2.01
CPNE1-216ENST00000437340 PI4K2AQ9BTU6 479 aa27.63■■■□□ 2.01
CPNE1-216ENST00000437340 PTPRJQ12913 1337 aa27.62■■■□□ 2.01
CPNE1-216ENST00000437340 FAM189A1O60320 539 aa27.62■■■□□ 2.01
CPNE1-216ENST00000437340 MCL1Q07820 350 aa27.62■■■□□ 2.01
CPNE1-216ENST00000437340 LMBRD2Q68DH5 695 aaPredicted RBP27.62■■■□□ 2.01
CPNE1-216ENST00000437340 CCNI2Q6ZMN8 369 aaPredicted RBP27.62■■■□□ 2.01
CPNE1-216ENST00000437340 DDX1Q92499 740 aaKnown RBP27.62■■■□□ 2.01
CPNE1-216ENST00000437340 MTA2O94776 668 aa27.61■■■□□ 2.01
CPNE1-216ENST00000437340 VNN1O95497 513 aa27.61■■■□□ 2.01
CPNE1-216ENST00000437340 BPIFB4P59827 614 aa27.61■■■□□ 2.01
CPNE1-216ENST00000437340 POU5F1BQ06416 359 aa27.61■■■□□ 2.01
CPNE1-216ENST00000437340 SURF1Q15526 300 aa27.61■■■□□ 2.01
CPNE1-216ENST00000437340 TAF3Q5VWG9 929 aa27.61■■■□□ 2.01
CPNE1-216ENST00000437340 ZNF677Q86XU0 584 aa27.61■■■□□ 2.01
CPNE1-216ENST00000437340 RHPN2Q8IUC4 686 aa27.61■■■□□ 2.01
CPNE1-216ENST00000437340 NFKBIZQ9BYH8 718 aa27.61■■■□□ 2.01
CPNE1-216ENST00000437340 UBXN6Q9BZV1 441 aa27.61■■■□□ 2.01
CPNE1-216ENST00000437340 KATNBL1Q9H079 304 aa27.61■■■□□ 2.01
CPNE1-216ENST00000437340 FZD8Q9H461 694 aa27.61■■■□□ 2.01
CPNE1-216ENST00000437340 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.61■■■□□ 2.01
CPNE1-216ENST00000437340 TMEM59LQ9UK28 342 aa27.61■■■□□ 2.01
CPNE1-216ENST00000437340 ZNF236Q9UL36 1845 aa27.61■■■□□ 2.01
CPNE1-216ENST00000437340 ACKR2O00590 384 aa27.6■■■□□ 2.01
CPNE1-216ENST00000437340 OGTO15294 1046 aa27.6■■■□□ 2.01
CPNE1-216ENST00000437340 LGALS2P05162 132 aa27.6■■■□□ 2.01
CPNE1-216ENST00000437340 MMEP08473 750 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms