RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 PTPRHQ9HD43 1115 aa19.25■□□□□ 0.67
SBDSP1-203ENST00000437201 SLC38A7Q9NVC3 462 aa19.25■□□□□ 0.67
SBDSP1-203ENST00000437201 LARSQ9P2J5 1176 aaKnown RBP19.25■□□□□ 0.67
SBDSP1-203ENST00000437201 CCDC195A0A1B0GUA6 201 aa19.24■□□□□ 0.67
SBDSP1-203ENST00000437201 SFI1A8K8P3 1242 aa19.24■□□□□ 0.67
SBDSP1-203ENST00000437201 SLC16A4O15374 487 aa19.24■□□□□ 0.67
SBDSP1-203ENST00000437201 TRAPPC3O43617 180 aa19.24■□□□□ 0.67
SBDSP1-203ENST00000437201 KIF4AO95239 1232 aa19.24■□□□□ 0.67
SBDSP1-203ENST00000437201 MCF2P10911 925 aa19.24■□□□□ 0.67
SBDSP1-203ENST00000437201 SLC12A3P55017 1021 aa19.24■□□□□ 0.67
SBDSP1-203ENST00000437201 NAB2Q15742 525 aa19.24■□□□□ 0.67
SBDSP1-203ENST00000437201 TMEM119Q4V9L6 283 aa19.24■□□□□ 0.67
SBDSP1-203ENST00000437201 FAM171A1Q5VUB5 890 aa19.24■□□□□ 0.67
SBDSP1-203ENST00000437201 DCLRE1AQ6PJP8 1040 aa19.24■□□□□ 0.67
SBDSP1-203ENST00000437201 PALB2Q86YC2 1186 aa19.24■□□□□ 0.67
SBDSP1-203ENST00000437201 KREMEN2Q8NCW0 462 aa19.24■□□□□ 0.67
SBDSP1-203ENST00000437201 RASSF8Q8NHQ8 419 aa19.24■□□□□ 0.67
SBDSP1-203ENST00000437201 RABGGTAQ92696 567 aa19.24■□□□□ 0.67
SBDSP1-203ENST00000437201 B3GALT6Q96L58 329 aa19.24■□□□□ 0.67
SBDSP1-203ENST00000437201 PPP1R10Q96QC0 940 aaKnown RBP19.24■□□□□ 0.67
SBDSP1-203ENST00000437201 PLIN2Q99541 437 aa19.24■□□□□ 0.67
SBDSP1-203ENST00000437201 PAAF1Q9BRP4 392 aa19.24■□□□□ 0.67
SBDSP1-203ENST00000437201 TARS2Q9BW92 718 aaKnown RBP19.24■□□□□ 0.67
SBDSP1-203ENST00000437201 ZDHHC7Q9NXF8 308 aa19.24■□□□□ 0.67
SBDSP1-203ENST00000437201 TRIOO75962 3097 aa19.23■□□□□ 0.67
SBDSP1-203ENST00000437201 VPS37CA5D8V6 355 aaPredicted RBP19.23■□□□□ 0.67
SBDSP1-203ENST00000437201 TMEM189-UBE2V1I3L0A0 370 aa19.23■□□□□ 0.67
SBDSP1-203ENST00000437201 BRD1O95696 1058 aa19.23■□□□□ 0.67
SBDSP1-203ENST00000437201 RAD51AP2Q09MP3 1159 aa19.23■□□□□ 0.67
SBDSP1-203ENST00000437201 MPZL3Q6UWV2 235 aa19.23■□□□□ 0.67
SBDSP1-203ENST00000437201 CEP57Q86XR8 500 aa19.23■□□□□ 0.67
SBDSP1-203ENST00000437201 HASPINQ8TF76 798 aa19.23■□□□□ 0.67
SBDSP1-203ENST00000437201 PIK3R5Q8WYR1 880 aa19.23■□□□□ 0.67
SBDSP1-203ENST00000437201 DDX27Q96GQ7 796 aaKnown RBP19.23■□□□□ 0.67
SBDSP1-203ENST00000437201 ACAP3Q96P50 834 aa19.23■□□□□ 0.67
SBDSP1-203ENST00000437201 CDT1Q9H211 546 aa19.23■□□□□ 0.67
SBDSP1-203ENST00000437201 ODF2LQ9ULJ1 636 aa19.23■□□□□ 0.67
SBDSP1-203ENST00000437201 SMIM28A0A1B0GU29 152 aa19.22■□□□□ 0.67
SBDSP1-203ENST00000437201 TGM5O43548 720 aa19.22■□□□□ 0.67
SBDSP1-203ENST00000437201 TOM1L1O75674 476 aa19.22■□□□□ 0.67
SBDSP1-203ENST00000437201 B3GAT3O94766 335 aa19.22■□□□□ 0.67
SBDSP1-203ENST00000437201 RTP2Q5QGT7 225 aa19.22■□□□□ 0.67
SBDSP1-203ENST00000437201 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.22■□□□□ 0.67
SBDSP1-203ENST00000437201 TAS1R3Q7RTX0 852 aa19.22■□□□□ 0.67
SBDSP1-203ENST00000437201 TMEM161BQ8NDZ6 487 aa19.22■□□□□ 0.67
SBDSP1-203ENST00000437201 PRRX2Q99811 253 aa19.22■□□□□ 0.67
SBDSP1-203ENST00000437201 PIDD1Q9HB75 910 aa19.22■□□□□ 0.67
SBDSP1-203ENST00000437201 CACNG4Q9UBN1 327 aa19.22■□□□□ 0.67
SBDSP1-203ENST00000437201 LIMD1Q9UGP4 676 aa19.22■□□□□ 0.67
SBDSP1-203ENST00000437201 PAPLNO95428 1278 aa19.21■□□□□ 0.67
SBDSP1-203ENST00000437201 MAPTP10636 758 aaKnown RBP19.21■□□□□ 0.67
SBDSP1-203ENST00000437201 PROZP22891 400 aa19.21■□□□□ 0.67
SBDSP1-203ENST00000437201 ABCD1P33897 745 aa19.21■□□□□ 0.67
SBDSP1-203ENST00000437201 OSTNP61366 133 aa19.21■□□□□ 0.67
SBDSP1-203ENST00000437201 SF3A1Q15459 793 aaKnown RBP19.21■□□□□ 0.67
SBDSP1-203ENST00000437201 PSMD5Q16401 504 aa19.21■□□□□ 0.67
SBDSP1-203ENST00000437201 XKR4Q5GH76 650 aa19.21■□□□□ 0.67
SBDSP1-203ENST00000437201 GLRA4Q5JXX5 417 aa19.21■□□□□ 0.67
SBDSP1-203ENST00000437201 LILRA6Q6PI73 481 aa19.21■□□□□ 0.67
SBDSP1-203ENST00000437201 PRSS55Q6UWB4 352 aaPredicted RBP19.21■□□□□ 0.67
SBDSP1-203ENST00000437201 ALKAL1Q6UXT8 129 aa19.21■□□□□ 0.67
SBDSP1-203ENST00000437201 ZPBP2Q6X784 338 aa19.21■□□□□ 0.67
SBDSP1-203ENST00000437201 GLYCTKQ8IVS8 523 aa19.21■□□□□ 0.67
SBDSP1-203ENST00000437201 FBXL6Q8N531 539 aa19.21■□□□□ 0.67
SBDSP1-203ENST00000437201 SMG7Q92540 1137 aaKnown RBP19.21■□□□□ 0.67
SBDSP1-203ENST00000437201 WDR6Q9NNW5 1121 aaKnown RBP19.21■□□□□ 0.67
SBDSP1-203ENST00000437201 CLDN3O15551 220 aa19.2■□□□□ 0.66
SBDSP1-203ENST00000437201 KRT18P05783 430 aaKnown RBP19.2■□□□□ 0.66
SBDSP1-203ENST00000437201 SPATA31D3P0C874 917 aa19.2■□□□□ 0.66
SBDSP1-203ENST00000437201 KCNE1P15382 129 aa19.2■□□□□ 0.66
SBDSP1-203ENST00000437201 RPL17P18621 184 aaKnown RBP19.2■□□□□ 0.66
SBDSP1-203ENST00000437201 CLCNKBP51801 687 aa19.2■□□□□ 0.66
SBDSP1-203ENST00000437201 NOLC1Q14978 699 aaKnown RBP eCLIP19.2■□□□□ 0.66
SBDSP1-203ENST00000437201 UPP1Q16831 310 aa19.2■□□□□ 0.66
SBDSP1-203ENST00000437201 LIN9Q5TKA1 542 aa19.2■□□□□ 0.66
SBDSP1-203ENST00000437201 SPATA31D4Q6ZUB0 917 aa19.2■□□□□ 0.66
SBDSP1-203ENST00000437201 GPBP1Q86WP2 473 aa19.2■□□□□ 0.66
SBDSP1-203ENST00000437201 LNX1Q8TBB1 728 aaPredicted RBP19.2■□□□□ 0.66
SBDSP1-203ENST00000437201 ASIC4Q96FT7 647 aa19.2■□□□□ 0.66
SBDSP1-203ENST00000437201 INTS4Q96HW7 963 aaKnown RBP19.2■□□□□ 0.66
SBDSP1-203ENST00000437201 BACH2Q9BYV9 841 aa19.2■□□□□ 0.66
SBDSP1-203ENST00000437201 PRKD2Q9BZL6 878 aa19.2■□□□□ 0.66
SBDSP1-203ENST00000437201 CXCL16Q9H2A7 254 aa19.2■□□□□ 0.66
SBDSP1-203ENST00000437201 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.2■□□□□ 0.66
SBDSP1-203ENST00000437201 RFPL2O75678 378 aa19.19■□□□□ 0.66
SBDSP1-203ENST00000437201 FGFR3P22607 806 aa19.19■□□□□ 0.66
SBDSP1-203ENST00000437201 RPL9P32969 192 aaKnown RBP19.19■□□□□ 0.66
SBDSP1-203ENST00000437201 MATR3P43243 847 aaKnown RBP eCLIP19.19■□□□□ 0.66
SBDSP1-203ENST00000437201 KYAT1Q16773 422 aa19.19■□□□□ 0.66
SBDSP1-203ENST00000437201 ARSHQ5FYA8 562 aa19.19■□□□□ 0.66
SBDSP1-203ENST00000437201 CEP120Q8N960 986 aa19.19■□□□□ 0.66
SBDSP1-203ENST00000437201 KCNN1Q92952 543 aa19.19■□□□□ 0.66
SBDSP1-203ENST00000437201 BICD1Q96G01 975 aa19.19■□□□□ 0.66
SBDSP1-203ENST00000437201 SNX27Q96L92 541 aa19.19■□□□□ 0.66
SBDSP1-203ENST00000437201 CLSTN3Q9BQT9 956 aa19.19■□□□□ 0.66
SBDSP1-203ENST00000437201 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.19■□□□□ 0.66
SBDSP1-203ENST00000437201 IGSF9Q9P2J2 1179 aa19.19■□□□□ 0.66
SBDSP1-203ENST00000437201 ANKFY1Q9P2R3 1169 aa19.19■□□□□ 0.66
SBDSP1-203ENST00000437201 CLUHO75153 1309 aa19.19■□□□□ 0.66
SBDSP1-203ENST00000437201 TECTAO75443 2155 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms