RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 FAM43BQ6ZT52 329 aaPredicted RBP24.93■■□□□ 1.58
CPSF4-204ENST00000436336 UBE2Q1Q7Z7E8 422 aa24.93■■□□□ 1.58
CPSF4-204ENST00000436336 WDR49Q8IV35 697 aa24.93■■□□□ 1.58
CPSF4-204ENST00000436336 FAM212AQ96EL1 285 aa24.93■■□□□ 1.58
CPSF4-204ENST00000436336 PCMTD1Q96MG8 357 aaPredicted RBP24.93■■□□□ 1.58
CPSF4-204ENST00000436336 TRAIPQ9BWF2 469 aa24.93■■□□□ 1.58
CPSF4-204ENST00000436336 IFIH1Q9BYX4 1025 aaKnown RBP24.93■■□□□ 1.58
CPSF4-204ENST00000436336 TMEM117Q9H0C3 514 aa24.93■■□□□ 1.58
CPSF4-204ENST00000436336 TMX1Q9H3N1 280 aa24.93■■□□□ 1.58
CPSF4-204ENST00000436336 ASB7Q9H672 318 aa24.93■■□□□ 1.58
CPSF4-204ENST00000436336 SNTG2Q9NY99 539 aa24.93■■□□□ 1.58
CPSF4-204ENST00000436336 EXOC3L4Q17RC7 722 aa24.92■■□□□ 1.58
CPSF4-204ENST00000436336 SLC10A6Q3KNW5 377 aa24.92■■□□□ 1.58
CPSF4-204ENST00000436336 CD302Q8IX05 232 aa24.92■■□□□ 1.58
CPSF4-204ENST00000436336 NXF3Q9H4D5 531 aaKnown RBP24.92■■□□□ 1.58
CPSF4-204ENST00000436336 TOPORSQ9NS56 1045 aaPredicted RBP24.92■■□□□ 1.58
CPSF4-204ENST00000436336 FAM105AQ9NUU6 356 aa24.92■■□□□ 1.58
CPSF4-204ENST00000436336 TMEM39AQ9NV64 488 aa24.92■■□□□ 1.58
CPSF4-204ENST00000436336 IPPQ9Y573 584 aa24.92■■□□□ 1.58
CPSF4-204ENST00000436336 UMODL1Q5DID0 1318 aa24.92■■□□□ 1.58
CPSF4-204ENST00000436336 TTC26A0AVF1 554 aa24.92■■□□□ 1.58
CPSF4-204ENST00000436336 YARSP54577 528 aaKnown RBP24.92■■□□□ 1.58
CPSF4-204ENST00000436336 SMG8Q8ND04 991 aaKnown RBP24.92■■□□□ 1.58
CPSF4-204ENST00000436336 ZNF516Q92618 1163 aa24.92■■□□□ 1.58
CPSF4-204ENST00000436336 CRACR2AQ9BSW2 395 aa24.92■■□□□ 1.58
CPSF4-204ENST00000436336 NUP58Q9BVL2 599 aa24.92■■□□□ 1.58
CPSF4-204ENST00000436336 PLEKHA5Q9HAU0 1116 aa24.92■■□□□ 1.58
CPSF4-204ENST00000436336 PCDHB2Q9Y5E7 798 aa24.92■■□□□ 1.58
CPSF4-204ENST00000436336 ALPK3Q96L96 1907 aa24.91■■□□□ 1.58
CPSF4-204ENST00000436336 NBNO60934 754 aa24.91■■□□□ 1.58
CPSF4-204ENST00000436336 KLK7P49862 253 aa24.91■■□□□ 1.58
CPSF4-204ENST00000436336 RAB27AP51159 221 aa24.91■■□□□ 1.58
CPSF4-204ENST00000436336 TBX2Q13207 712 aaPredicted RBP24.91■■□□□ 1.58
CPSF4-204ENST00000436336 TRIM14Q14142 442 aa24.91■■□□□ 1.58
CPSF4-204ENST00000436336 C15orf39Q6ZRI6 1047 aa24.91■■□□□ 1.58
CPSF4-204ENST00000436336 SV2AQ7L0J3 742 aa24.91■■□□□ 1.58
CPSF4-204ENST00000436336 FTHL17Q9BXU8 183 aa24.91■■□□□ 1.58
CPSF4-204ENST00000436336 PPP1R12CQ9BZL4 782 aa24.91■■□□□ 1.58
CPSF4-204ENST00000436336 GCNT4Q9P109 453 aa24.91■■□□□ 1.58
CPSF4-204ENST00000436336 HES2Q9Y543 173 aa24.91■■□□□ 1.58
CPSF4-204ENST00000436336 PTPRJQ12913 1337 aa24.91■■□□□ 1.58
CPSF4-204ENST00000436336 LACTBL1A8MY62 500 aa24.9■■□□□ 1.58
CPSF4-204ENST00000436336 MEFVO15553 781 aaPredicted RBP24.9■■□□□ 1.58
CPSF4-204ENST00000436336 MGEA5O60502 916 aa24.9■■□□□ 1.58
CPSF4-204ENST00000436336 GPNMBQ14956 572 aa24.9■■□□□ 1.58
CPSF4-204ENST00000436336 FIGNQ5HY92 759 aa24.9■■□□□ 1.58
CPSF4-204ENST00000436336 LMBRD2Q68DH5 695 aaPredicted RBP24.9■■□□□ 1.58
CPSF4-204ENST00000436336 HACE1Q8IYU2 909 aa24.9■■□□□ 1.58
CPSF4-204ENST00000436336 IQCDQ96DY2 449 aa24.9■■□□□ 1.58
CPSF4-204ENST00000436336 WNT8AQ9H1J5 351 aa24.9■■□□□ 1.58
CPSF4-204ENST00000436336 COQ4Q9Y3A0 265 aa24.9■■□□□ 1.58
CPSF4-204ENST00000436336 RBAK-RBAKDNI3L0D1 243 aa24.89■■□□□ 1.58
CPSF4-204ENST00000436336 C4BPAP04003 597 aaKnown RBP24.89■■□□□ 1.58
CPSF4-204ENST00000436336 ZACNQ401N2 412 aa24.89■■□□□ 1.58
CPSF4-204ENST00000436336 EPC2Q52LR7 807 aa24.89■■□□□ 1.58
CPSF4-204ENST00000436336 PLEKHG4Q58EX7 1191 aa24.89■■□□□ 1.58
CPSF4-204ENST00000436336 NT5DC4Q86YG4 428 aa24.89■■□□□ 1.58
CPSF4-204ENST00000436336 ADAM2Q99965 735 aa24.89■■□□□ 1.58
CPSF4-204ENST00000436336 TET1Q8NFU7 2136 aa24.89■■□□□ 1.58
CPSF4-204ENST00000436336 ZNF623O75123 536 aa24.89■■□□□ 1.57
CPSF4-204ENST00000436336 RECQL4O94761 1208 aa24.89■■□□□ 1.57
CPSF4-204ENST00000436336 SKIP12755 728 aa24.89■■□□□ 1.57
CPSF4-204ENST00000436336 TRIM21P19474 475 aaKnown RBP24.89■■□□□ 1.57
CPSF4-204ENST00000436336 SLC9A1P19634 815 aa24.89■■□□□ 1.57
CPSF4-204ENST00000436336 PON1P27169 355 aa24.89■■□□□ 1.57
CPSF4-204ENST00000436336 DUOXA2Q1HG44 320 aa24.89■■□□□ 1.57
CPSF4-204ENST00000436336 PPFIBP1Q86W92 1011 aa24.89■■□□□ 1.57
CPSF4-204ENST00000436336 EFCAB13Q8IY85 973 aa24.89■■□□□ 1.57
CPSF4-204ENST00000436336 NEK11Q8NG66 645 aa24.89■■□□□ 1.57
CPSF4-204ENST00000436336 APBB2Q92870 758 aa24.89■■□□□ 1.57
CPSF4-204ENST00000436336 SNX27Q96L92 541 aa24.89■■□□□ 1.57
CPSF4-204ENST00000436336 APOL6Q9BWW8 343 aa24.89■■□□□ 1.57
CPSF4-204ENST00000436336 LSM14BQ9BX40 385 aaKnown RBP24.89■■□□□ 1.57
CPSF4-204ENST00000436336 PLCB1Q9NQ66 1216 aa24.89■■□□□ 1.57
CPSF4-204ENST00000436336 RGS18Q9NS28 235 aa24.89■■□□□ 1.57
CPSF4-204ENST00000436336 A0A0U1RQF3 1178 aa24.88■■□□□ 1.57
CPSF4-204ENST00000436336 PTMAP06454 111 aaKnown RBP24.88■■□□□ 1.57
CPSF4-204ENST00000436336 CYP2C18P33260 490 aa24.88■■□□□ 1.57
CPSF4-204ENST00000436336 CCL23P55773 120 aa24.88■■□□□ 1.57
CPSF4-204ENST00000436336 EHBP1Q8NDI1 1231 aa24.88■■□□□ 1.57
CPSF4-204ENST00000436336 FBXL13Q8NEE6 735 aa24.88■■□□□ 1.57
CPSF4-204ENST00000436336 OR5B17Q8NGF7 314 aa24.88■■□□□ 1.57
CPSF4-204ENST00000436336 SCLYQ96I15 445 aa24.88■■□□□ 1.57
CPSF4-204ENST00000436336 FAM207AQ9NSI2 230 aaPredicted RBP24.88■■□□□ 1.57
CPSF4-204ENST00000436336 PARP2Q9UGN5 583 aa24.88■■□□□ 1.57
CPSF4-204ENST00000436336 CXCL10P02778 98 aa24.87■■□□□ 1.57
CPSF4-204ENST00000436336 GYPCP04921 128 aa24.87■■□□□ 1.57
CPSF4-204ENST00000436336 TPM1P09493 284 aa24.87■■□□□ 1.57
CPSF4-204ENST00000436336 TMEM191BP0C7N4 346 aa24.87■■□□□ 1.57
CPSF4-204ENST00000436336 AKAP5P24588 427 aa24.87■■□□□ 1.57
CPSF4-204ENST00000436336 GSDMDP57764 484 aa24.87■■□□□ 1.57
CPSF4-204ENST00000436336 TDRD10Q5VZ19 366 aaKnown RBP24.87■■□□□ 1.57
CPSF4-204ENST00000436336 JADE1Q6IE81 842 aa24.87■■□□□ 1.57
CPSF4-204ENST00000436336 TRIM65Q6PJ69 517 aa24.87■■□□□ 1.57
CPSF4-204ENST00000436336 ALKAL1Q6UXT8 129 aa24.87■■□□□ 1.57
CPSF4-204ENST00000436336 CCDC186Q7Z3E2 898 aa24.87■■□□□ 1.57
CPSF4-204ENST00000436336 MRPL10Q7Z7H8 261 aaKnown RBP24.87■■□□□ 1.57
CPSF4-204ENST00000436336 SEPT8Q92599 483 aa24.87■■□□□ 1.57
CPSF4-204ENST00000436336 ANKRD36BP1Q96IX9 119 aa24.87■■□□□ 1.57
CPSF4-204ENST00000436336 TTYH3Q9C0H2 523 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms