RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 SDCCAG3Q96C92 435 aa16.56■□□□□ 0.24
NEDD4-202ENST00000435532 FTLP02792 175 aaPredicted RBP16.56■□□□□ 0.24
NEDD4-202ENST00000435532 ELAVL2Q12926 359 aaKnown RBP16.56■□□□□ 0.24
NEDD4-202ENST00000435532 LAMB3Q13751 1172 aa16.56■□□□□ 0.24
NEDD4-202ENST00000435532 DOLKQ9UPQ8 538 aa16.56■□□□□ 0.24
NEDD4-202ENST00000435532 ATXN8OSP0DMR3 200 aa16.56■□□□□ 0.24
NEDD4-202ENST00000435532 GNL1P36915 607 aaPredicted RBP16.56■□□□□ 0.24
NEDD4-202ENST00000435532 METTL7BQ6UX53 244 aa16.56■□□□□ 0.24
NEDD4-202ENST00000435532 TBC1D19Q8N5T2 526 aa16.56■□□□□ 0.24
NEDD4-202ENST00000435532 MYPNQ86TC9 1320 aa16.56■□□□□ 0.24
NEDD4-202ENST00000435532 SRGAP2O75044 1071 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 IRF1P10914 325 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 CYP11B2P19099 503 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 SLC1A1P43005 524 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 MYRIPQ8NFW9 859 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 ZC3H15Q8WU90 426 aaKnown RBP16.55■□□□□ 0.24
NEDD4-202ENST00000435532 GDAP1L1Q96MZ0 367 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 IDI2Q9BXS1 227 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 GOLPH3LQ9H4A5 285 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 PRG3Q9Y2Y8 225 aaPredicted RBP16.55■□□□□ 0.24
NEDD4-202ENST00000435532 CHAMP1Q96JM3 812 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 LRGUKQ96M69 825 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 AGPAT1Q99943 283 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 ABHD16BQ9H3Z7 469 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 HACD3Q9P035 362 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 SLC13A4Q9UKG4 626 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 TMEM247A6NEH6 219 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 HGSO14964 777 aaPredicted RBP16.55■□□□□ 0.24
NEDD4-202ENST00000435532 TTC4O95801 387 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 ADCY1Q08828 1119 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 RGMBQ6NW40 437 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 TRIM67Q6ZTA4 783 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 GLYCTKQ8IVS8 523 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 SH3KBP1Q96B97 665 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 RMDN1Q96DB5 314 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 ARHGAP42A6NI28 874 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 RTN2O75298 545 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 PDGFRBP09619 1106 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 NAMPTP43490 491 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 MUC3BQ9H195 1237 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 ASCC2Q9H1I8 757 aaPredicted RBP16.55■□□□□ 0.24
NEDD4-202ENST00000435532 EXOC1LA0A1B0GW35 172 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.55■□□□□ 0.24
NEDD4-202ENST00000435532 TTC8Q8TAM2 541 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 UCMAQ8WVF2 138 aa16.55■□□□□ 0.24
NEDD4-202ENST00000435532 EVI5O60447 810 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 FGGP02679 453 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 ANTXR2P58335 489 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 PLD1Q13393 1074 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 DBN1Q16643 649 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 MSH4O15457 936 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 P4HA2O15460 535 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 KRT37O76014 449 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 AMPD2Q01433 879 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 NSUN2Q08J23 767 aaKnown RBP eCLIP16.54■□□□□ 0.24
NEDD4-202ENST00000435532 LLGL1Q15334 1064 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 TAS2R42Q7RTR8 314 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 RNF208Q9H0X6 261 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 TMEM8AQ9HCN3 771 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 IPPQ9Y573 584 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 DISP2A7MBM2 1401 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 SREBF1P36956 1147 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 CASP2P42575 452 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 EDRF1Q3B7T1 1238 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 CATSPERBQ9H7T0 1116 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 ABHD10Q9NUJ1 306 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 SYNPO2Q9UMS6 1093 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 RICTORQ6R327 1708 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 PRAMEP78395 509 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 TTC19Q6DKK2 380 aaPredicted RBP16.54■□□□□ 0.24
NEDD4-202ENST00000435532 SHC4Q6S5L8 630 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 RABGGTAQ92696 567 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 ZBTB18Q99592 522 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 PXDNQ92626 1479 aa16.54■□□□□ 0.24
NEDD4-202ENST00000435532 A0A1W2PQC6 194 aa16.53■□□□□ 0.24
NEDD4-202ENST00000435532 ERVK-9P63128 1117 aa16.53■□□□□ 0.24
NEDD4-202ENST00000435532 ERVK-24P63145 666 aa16.53■□□□□ 0.24
NEDD4-202ENST00000435532 YWHAHQ04917 246 aaPredicted RBP16.53■□□□□ 0.24
NEDD4-202ENST00000435532 CUL1Q13616 776 aa16.53■□□□□ 0.24
NEDD4-202ENST00000435532 EFHC1Q5JVL4 640 aa16.53■□□□□ 0.24
NEDD4-202ENST00000435532 MRIQ9BWK5 157 aa16.53■□□□□ 0.24
NEDD4-202ENST00000435532 DPP3Q9NY33 737 aa16.53■□□□□ 0.24
NEDD4-202ENST00000435532 APEX2Q9UBZ4 518 aa16.53■□□□□ 0.24
NEDD4-202ENST00000435532 CASQ2O14958 399 aaPredicted RBP16.53■□□□□ 0.24
NEDD4-202ENST00000435532 FAM200BP0CF97 657 aa16.53■□□□□ 0.24
NEDD4-202ENST00000435532 ADORA2AP29274 412 aa16.53■□□□□ 0.24
NEDD4-202ENST00000435532 CDH6P55285 790 aa16.53■□□□□ 0.24
NEDD4-202ENST00000435532 RPL10AP62906 217 aaKnown RBP16.53■□□□□ 0.24
NEDD4-202ENST00000435532 MRPS31Q92665 395 aaKnown RBP16.53■□□□□ 0.24
NEDD4-202ENST00000435532 HPDLQ96IR7 371 aa16.53■□□□□ 0.24
NEDD4-202ENST00000435532 BFARQ9NZS9 450 aa16.53■□□□□ 0.24
NEDD4-202ENST00000435532 ATP8A1Q9Y2Q0 1164 aa16.53■□□□□ 0.24
NEDD4-202ENST00000435532 ESRRBO95718 433 aa16.53■□□□□ 0.24
NEDD4-202ENST00000435532 HMBSP08397 361 aa16.53■□□□□ 0.24
NEDD4-202ENST00000435532 DDX5P17844 614 aaKnown RBP16.53■□□□□ 0.24
NEDD4-202ENST00000435532 SLC12A1Q13621 1099 aa16.53■□□□□ 0.24
NEDD4-202ENST00000435532 RBBP8NLQ8NC74 664 aaPredicted RBP16.53■□□□□ 0.24
NEDD4-202ENST00000435532 MKNK1Q9BUB5 465 aa16.53■□□□□ 0.24
NEDD4-202ENST00000435532 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.53■□□□□ 0.24
NEDD4-202ENST00000435532 CCDC151A5D8V7 595 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms