RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 CEP89Q96ST8 783 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 STMN4Q9H169 189 aaPredicted RBP11.17□□□□□ -0.62
CD44-210ENST00000434472 PABPC3Q9H361 631 aaKnown RBP11.17□□□□□ -0.62
CD44-210ENST00000434472 ACAD9Q9H845 621 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 CYP26B1Q9NR63 512 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 BCCIPQ9P287 314 aaKnown RBP eCLIP11.17□□□□□ -0.62
CD44-210ENST00000434472 ARHGAP28Q9P2N2 729 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 CNOT8Q9UFF9 292 aaKnown RBP11.17□□□□□ -0.62
CD44-210ENST00000434472 SEPT9Q9UHD8 586 aaPredicted RBP11.17□□□□□ -0.62
CD44-210ENST00000434472 BCS1LQ9Y276 419 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 ATP8A1Q9Y2Q0 1164 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 SNX24Q9Y343 169 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 DOCK1Q14185 1865 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 FSCN2O14926 492 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 TRIM66O15016 1216 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 FAM107AO95990 144 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 LDHAP00338 332 aaKnown RBP11.17□□□□□ -0.62
CD44-210ENST00000434472 CPP00450 1065 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 PIGRP01833 764 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 PAEPP09466 180 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 SUPT20HL2P0C7V6 817 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 PTPRAP18433 802 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 HPDP32754 393 aaPredicted RBP11.17□□□□□ -0.62
CD44-210ENST00000434472 BAG6P46379 1132 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 PLTPP55058 493 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 ACTR2P61160 394 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 CLDN10P78369 228 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 PRKCEQ02156 737 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 DGKZQ13574 1117 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 BYSLQ13895 437 aaKnown RBP11.17□□□□□ -0.62
CD44-210ENST00000434472 SUPT20HL1Q3ZLR7 823 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 LIN9Q5TKA1 542 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 SMYD5Q6GMV2 418 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 ZDHHC24Q6UX98 284 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 APOBEC3FQ8IUX4 373 aaKnown RBP11.17□□□□□ -0.62
CD44-210ENST00000434472 GLG1Q92896 1179 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 SLCO2A1Q92959 643 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 TLCD1Q96CP7 247 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 PGM2Q96G03 612 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 FNBP1Q96RU3 617 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 FAM213AQ9BRX8 229 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 TMEM109Q9BVC6 243 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 KIFC3Q9BVG8 833 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 TEX13BQ9BXU2 312 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 POLR3FQ9H1D9 316 aaPredicted RBP11.17□□□□□ -0.62
CD44-210ENST00000434472 LRRC19Q9H756 370 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 XPNPEP1Q9NQW7 623 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 HOXC10Q9NYD6 342 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 NOVA2Q9UNW9 492 aaKnown RBP11.17□□□□□ -0.62
CD44-210ENST00000434472 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.17□□□□□ -0.62
CD44-210ENST00000434472 RIPK3Q9Y572 518 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 PCDHB2Q9Y5E7 798 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 STYXL1Q9Y6J8 313 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 GMNCA6NCL1 334 aa11.16□□□□□ -0.62
CD44-210ENST00000434472 DLATP10515 647 aaKnown RBP11.16□□□□□ -0.62
CD44-210ENST00000434472 PYGMP11217 842 aa11.16□□□□□ -0.62
CD44-210ENST00000434472 MAPK4P31152 587 aa11.16□□□□□ -0.62
CD44-210ENST00000434472 ICAM3P32942 547 aa11.16□□□□□ -0.62
CD44-210ENST00000434472 GMPSP49915 693 aaPredicted RBP11.16□□□□□ -0.62
CD44-210ENST00000434472 ADCY2Q08462 1091 aa11.16□□□□□ -0.62
CD44-210ENST00000434472 C6orf118Q5T5N4 469 aa11.16□□□□□ -0.62
CD44-210ENST00000434472 NBPF12Q5TAG4 269 aaPredicted RBP11.16□□□□□ -0.62
CD44-210ENST00000434472 TRMT1LQ7Z2T5 733 aaKnown RBP11.16□□□□□ -0.62
CD44-210ENST00000434472 YTHDF3Q7Z739 585 aaKnown RBP11.16□□□□□ -0.62
CD44-210ENST00000434472 TADA2BQ86TJ2 420 aa11.16□□□□□ -0.62
CD44-210ENST00000434472 MICALL2Q8IY33 904 aa11.16□□□□□ -0.62
CD44-210ENST00000434472 CCDC105Q8IYK2 499 aa11.16□□□□□ -0.62
CD44-210ENST00000434472 MYCBPAPQ8TBZ2 947 aa11.16□□□□□ -0.62
CD44-210ENST00000434472 GRK7Q8WTQ7 553 aa11.16□□□□□ -0.62
CD44-210ENST00000434472 TATDN2Q93075 761 aa11.16□□□□□ -0.62
CD44-210ENST00000434472 CENPTQ96BT3 561 aa11.16□□□□□ -0.62
CD44-210ENST00000434472 C18orf8Q96DM3 657 aa11.16□□□□□ -0.62
CD44-210ENST00000434472 CCT8L2Q96SF2 557 aa11.16□□□□□ -0.62
CD44-210ENST00000434472 POP1Q99575 1024 aaKnown RBP11.16□□□□□ -0.62
CD44-210ENST00000434472 TOPORSQ9NS56 1045 aaPredicted RBP11.16□□□□□ -0.62
CD44-210ENST00000434472 HOMER3Q9NSC5 361 aa11.16□□□□□ -0.62
CD44-210ENST00000434472 CYP39A1Q9NYL5 469 aa11.16□□□□□ -0.62
CD44-210ENST00000434472 GRHL1Q9NZI5 618 aa11.16□□□□□ -0.62
CD44-210ENST00000434472 SLC12A6Q9UHW9 1150 aa11.16□□□□□ -0.62
CD44-210ENST00000434472 ZNF214Q9UL59 606 aaPredicted RBP11.16□□□□□ -0.62
CD44-210ENST00000434472 FER1L6Q2WGJ9 1857 aa11.16□□□□□ -0.62
CD44-210ENST00000434472 E7EVH7 732 aa11.15□□□□□ -0.62
CD44-210ENST00000434472 ATMINO43313 823 aaPredicted RBP11.15□□□□□ -0.62
CD44-210ENST00000434472 GRIN3BO60391 1043 aa11.15□□□□□ -0.62
CD44-210ENST00000434472 ECEL1O95672 775 aa11.15□□□□□ -0.62
CD44-210ENST00000434472 RARAP10276 462 aa11.15□□□□□ -0.62
CD44-210ENST00000434472 UNGP13051 313 aaPredicted RBP11.15□□□□□ -0.62
CD44-210ENST00000434472 COPB2P35606 906 aa11.15□□□□□ -0.62
CD44-210ENST00000434472 RFC5P40937 340 aa11.15□□□□□ -0.62
CD44-210ENST00000434472 NAMPTP43490 491 aa11.15□□□□□ -0.62
CD44-210ENST00000434472 MARCKSL1P49006 195 aa11.15□□□□□ -0.62
CD44-210ENST00000434472 POLGP54098 1239 aaPredicted RBP11.15□□□□□ -0.62
CD44-210ENST00000434472 PTP4A2Q12974 167 aa11.15□□□□□ -0.62
CD44-210ENST00000434472 CALCOCO2Q13137 446 aa11.15□□□□□ -0.62
CD44-210ENST00000434472 EMC2Q15006 297 aa11.15□□□□□ -0.62
CD44-210ENST00000434472 SKIDA1Q1XH10 827 aa11.15□□□□□ -0.62
CD44-210ENST00000434472 ZACNQ401N2 412 aa11.15□□□□□ -0.62
CD44-210ENST00000434472 TTC31Q49AM3 519 aaPredicted RBP11.15□□□□□ -0.62
CD44-210ENST00000434472 TBC1D10BQ4KMP7 808 aaPredicted RBP11.15□□□□□ -0.62
CD44-210ENST00000434472 AADACL2Q6P093 401 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms