RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 RTP2Q5QGT7 225 aa16.37■□□□□ 0.21
RPUSD3-208ENST00000433972 ATF7IP2Q5U623 682 aa16.37■□□□□ 0.21
RPUSD3-208ENST00000433972 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.37■□□□□ 0.21
RPUSD3-208ENST00000433972 CEP57Q86XR8 500 aa16.37■□□□□ 0.21
RPUSD3-208ENST00000433972 GLYCTKQ8IVS8 523 aa16.37■□□□□ 0.21
RPUSD3-208ENST00000433972 SIX5Q8N196 739 aa16.37■□□□□ 0.21
RPUSD3-208ENST00000433972 ZNF707Q96C28 371 aaPredicted RBP16.37■□□□□ 0.21
RPUSD3-208ENST00000433972 B3GALT6Q96L58 329 aa16.37■□□□□ 0.21
RPUSD3-208ENST00000433972 KCNG1Q9UIX4 513 aa16.37■□□□□ 0.21
RPUSD3-208ENST00000433972 FBXW11Q9UKB1 542 aa16.37■□□□□ 0.21
RPUSD3-208ENST00000433972 DNM3Q9UQ16 869 aa16.37■□□□□ 0.21
RPUSD3-208ENST00000433972 DENND4AQ7Z401 1863 aa16.37■□□□□ 0.21
RPUSD3-208ENST00000433972 TMEM189-UBE2V1I3L0A0 370 aa16.36■□□□□ 0.21
RPUSD3-208ENST00000433972 STK25O00506 426 aa16.36■□□□□ 0.21
RPUSD3-208ENST00000433972 PTGESO14684 152 aa16.36■□□□□ 0.21
RPUSD3-208ENST00000433972 SPATA31D3P0C874 917 aa16.36■□□□□ 0.21
RPUSD3-208ENST00000433972 U2AF2P26368 475 aaKnown RBP eCLIP16.36■□□□□ 0.21
RPUSD3-208ENST00000433972 NBL1P41271 181 aa16.36■□□□□ 0.21
RPUSD3-208ENST00000433972 DMP1Q13316 513 aaPredicted RBP16.36■□□□□ 0.21
RPUSD3-208ENST00000433972 PPM1LQ5SGD2 360 aa16.36■□□□□ 0.21
RPUSD3-208ENST00000433972 KRT79Q5XKE5 535 aa16.36■□□□□ 0.21
RPUSD3-208ENST00000433972 CWF19L1Q69YN2 538 aaKnown RBP16.36■□□□□ 0.21
RPUSD3-208ENST00000433972 SPATA31D4Q6ZUB0 917 aa16.36■□□□□ 0.21
RPUSD3-208ENST00000433972 GET4Q7L5D6 327 aaPredicted RBP16.36■□□□□ 0.21
RPUSD3-208ENST00000433972 SNX29Q8TEQ0 813 aa16.36■□□□□ 0.21
RPUSD3-208ENST00000433972 HASPINQ8TF76 798 aa16.36■□□□□ 0.21
RPUSD3-208ENST00000433972 BSNDQ8WZ55 320 aa16.36■□□□□ 0.21
RPUSD3-208ENST00000433972 DRC1Q96MC2 740 aa16.36■□□□□ 0.21
RPUSD3-208ENST00000433972 TIPINQ9BVW5 301 aa16.36■□□□□ 0.21
RPUSD3-208ENST00000433972 CCDC94Q9BW85 323 aaPredicted RBP16.36■□□□□ 0.21
RPUSD3-208ENST00000433972 C17orf75Q9HAS0 396 aa16.36■□□□□ 0.21
RPUSD3-208ENST00000433972 KIAA1024Q9UPX6 916 aa16.36■□□□□ 0.21
RPUSD3-208ENST00000433972 N4BP1O75113 896 aaKnown RBP16.35■□□□□ 0.21
RPUSD3-208ENST00000433972 B3GAT3O94766 335 aa16.35■□□□□ 0.21
RPUSD3-208ENST00000433972 POU2F2P09086 479 aa16.35■□□□□ 0.21
RPUSD3-208ENST00000433972 LAMP2P13473 410 aa16.35■□□□□ 0.21
RPUSD3-208ENST00000433972 RPL17P18621 184 aaKnown RBP16.35■□□□□ 0.21
RPUSD3-208ENST00000433972 FSHRP23945 695 aa16.35■□□□□ 0.21
RPUSD3-208ENST00000433972 UVSSAQ2YD98 709 aa16.35■□□□□ 0.21
RPUSD3-208ENST00000433972 DCLRE1AQ6PJP8 1040 aa16.35■□□□□ 0.21
RPUSD3-208ENST00000433972 PRSS55Q6UWB4 352 aaPredicted RBP16.35■□□□□ 0.21
RPUSD3-208ENST00000433972 KCTD17Q8N5Z5 321 aa16.35■□□□□ 0.21
RPUSD3-208ENST00000433972 IGSF22Q8N9C0 903 aa16.35■□□□□ 0.21
RPUSD3-208ENST00000433972 LNX1Q8TBB1 728 aaPredicted RBP16.35■□□□□ 0.21
RPUSD3-208ENST00000433972 RABGGTAQ92696 567 aa16.35■□□□□ 0.21
RPUSD3-208ENST00000433972 MYADMQ96S97 322 aa16.35■□□□□ 0.21
RPUSD3-208ENST00000433972 PAAF1Q9BRP4 392 aa16.35■□□□□ 0.21
RPUSD3-208ENST00000433972 DDX19AQ9NUU7 478 aaKnown RBP16.35■□□□□ 0.21
RPUSD3-208ENST00000433972 SLC38A7Q9NVC3 462 aa16.35■□□□□ 0.21
RPUSD3-208ENST00000433972 TNFSF13BQ9Y275 285 aa16.35■□□□□ 0.21
RPUSD3-208ENST00000433972 GDAQ9Y2T3 454 aa16.35■□□□□ 0.21
RPUSD3-208ENST00000433972 RBM19Q9Y4C8 960 aaKnown RBP16.35■□□□□ 0.21
RPUSD3-208ENST00000433972 CCDC169A6NNP5 214 aa16.34■□□□□ 0.21
RPUSD3-208ENST00000433972 C8AP07357 584 aa16.34■□□□□ 0.21
RPUSD3-208ENST00000433972 CFHP08603 1231 aa16.34■□□□□ 0.21
RPUSD3-208ENST00000433972 MYBP10242 640 aa16.34■□□□□ 0.21
RPUSD3-208ENST00000433972 PRPHP41219 470 aa16.34■□□□□ 0.21
RPUSD3-208ENST00000433972 ANKS3Q6ZW76 656 aa16.34■□□□□ 0.21
RPUSD3-208ENST00000433972 MTSS1LQ765P7 747 aa16.34■□□□□ 0.21
RPUSD3-208ENST00000433972 CCDC105Q8IYK2 499 aa16.34■□□□□ 0.21
RPUSD3-208ENST00000433972 SLC44A3Q8N4M1 653 aa16.34■□□□□ 0.21
RPUSD3-208ENST00000433972 FEZF2Q8TBJ5 459 aa16.34■□□□□ 0.21
RPUSD3-208ENST00000433972 DDX27Q96GQ7 796 aaKnown RBP16.34■□□□□ 0.21
RPUSD3-208ENST00000433972 CLSTN3Q9BQT9 956 aa16.34■□□□□ 0.21
RPUSD3-208ENST00000433972 MRPL4Q9BYD3 311 aaKnown RBP16.34■□□□□ 0.21
RPUSD3-208ENST00000433972 TMEM134Q9H6X4 195 aa16.34■□□□□ 0.21
RPUSD3-208ENST00000433972 USP34Q70CQ2 3546 aa16.33■□□□□ 0.2
RPUSD3-208ENST00000433972 TTLL13PA6NNM8 815 aa16.33■□□□□ 0.2
RPUSD3-208ENST00000433972 PDIA4P13667 645 aaKnown RBP16.33■□□□□ 0.2
RPUSD3-208ENST00000433972 NPR3P17342 541 aa16.33■□□□□ 0.2
RPUSD3-208ENST00000433972 GRM5P41594 1212 aa16.33■□□□□ 0.2
RPUSD3-208ENST00000433972 PEX3P56589 373 aa16.33■□□□□ 0.2
RPUSD3-208ENST00000433972 PTGDRQ13258 359 aa16.33■□□□□ 0.2
RPUSD3-208ENST00000433972 RAB33AQ14088 237 aa16.33■□□□□ 0.2
RPUSD3-208ENST00000433972 NAB2Q15742 525 aa16.33■□□□□ 0.2
RPUSD3-208ENST00000433972 ZNF568Q3ZCX4 644 aa16.33■□□□□ 0.2
RPUSD3-208ENST00000433972 RILPL1Q5EBL4 403 aa16.33■□□□□ 0.2
RPUSD3-208ENST00000433972 EEF1DP3Q658K8 133 aa16.33■□□□□ 0.2
RPUSD3-208ENST00000433972 DTHD1Q6ZMT9 781 aa16.33■□□□□ 0.2
RPUSD3-208ENST00000433972 C4orf32Q8N8J7 132 aa16.33■□□□□ 0.2
RPUSD3-208ENST00000433972 SHDQ96IW2 340 aa16.33■□□□□ 0.2
RPUSD3-208ENST00000433972 KIFC3Q9BVG8 833 aa16.33■□□□□ 0.2
RPUSD3-208ENST00000433972 KMT5AQ9NQR1 393 aa16.33■□□□□ 0.2
RPUSD3-208ENST00000433972 CDH7Q9ULB5 785 aa16.33■□□□□ 0.2
RPUSD3-208ENST00000433972 TDRD15B5MCY1 1934 aaKnown RBP16.32■□□□□ 0.2
RPUSD3-208ENST00000433972 ANHXE9PGG2 379 aa16.32■□□□□ 0.2
RPUSD3-208ENST00000433972 NARSO43776 548 aaKnown RBP16.32■□□□□ 0.2
RPUSD3-208ENST00000433972 FGFR3P22607 806 aa16.32■□□□□ 0.2
RPUSD3-208ENST00000433972 NPTX2P47972 431 aa16.32■□□□□ 0.2
RPUSD3-208ENST00000433972 HTR4Q13639 388 aa16.32■□□□□ 0.2
RPUSD3-208ENST00000433972 AXDND1Q5T1B0 1012 aaPredicted RBP16.32■□□□□ 0.2
RPUSD3-208ENST00000433972 PHLDB3Q6NSJ2 640 aa16.32■□□□□ 0.2
RPUSD3-208ENST00000433972 GRASPQ7Z6J2 395 aaPredicted RBP16.32■□□□□ 0.2
RPUSD3-208ENST00000433972 DTWD2Q8NBA8 298 aa16.32■□□□□ 0.2
RPUSD3-208ENST00000433972 RSAD2Q8WXG1 361 aa16.32■□□□□ 0.2
RPUSD3-208ENST00000433972 NKD2Q969F2 451 aaPredicted RBP16.32■□□□□ 0.2
RPUSD3-208ENST00000433972 PPP1R10Q96QC0 940 aaKnown RBP16.32■□□□□ 0.2
RPUSD3-208ENST00000433972 SLC2A4RGQ9NR83 387 aa16.32■□□□□ 0.2
RPUSD3-208ENST00000433972 MTRRQ9UBK8 725 aa16.32■□□□□ 0.2
RPUSD3-208ENST00000433972 CACNG4Q9UBN1 327 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms