RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-205ENST00000433888 CDKL5O76039 1030 aa5.43□□□□□ -1.54
PTPN4-205ENST00000433888 ID4P47928 161 aa5.43□□□□□ -1.54
PTPN4-205ENST00000433888 DHCR24Q15392 516 aa5.43□□□□□ -1.54
PTPN4-205ENST00000433888 ZNF362Q5T0B9 420 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-205ENST00000433888 GPR149Q86SP6 731 aa5.43□□□□□ -1.54
PTPN4-205ENST00000433888 GPR156Q8NFN8 814 aa5.43□□□□□ -1.54
PTPN4-205ENST00000433888 OR56A1Q8NGH5 318 aa5.43□□□□□ -1.54
PTPN4-205ENST00000433888 TSPEARQ8WU66 669 aa5.43□□□□□ -1.54
PTPN4-205ENST00000433888 TMEM74BQ9NUR3 256 aa5.43□□□□□ -1.54
PTPN4-205ENST00000433888 FAM30AQ9NZY2 134 aa5.43□□□□□ -1.54
PTPN4-205ENST00000433888 DPP7Q9UHL4 492 aa5.43□□□□□ -1.54
PTPN4-205ENST00000433888 MAPRE3Q9UPY8 281 aa5.43□□□□□ -1.54
PTPN4-205ENST00000433888 CCDC78A2IDD5 438 aa5.42□□□□□ -1.54
PTPN4-205ENST00000433888 NEMP1O14524 444 aa5.42□□□□□ -1.54
PTPN4-205ENST00000433888 PDE8AO60658 829 aa5.42□□□□□ -1.54
PTPN4-205ENST00000433888 FOSP01100 380 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-205ENST00000433888 SNRPA1P09661 255 aaKnown RBP5.42□□□□□ -1.54
PTPN4-205ENST00000433888 ENPP1P22413 925 aa5.42□□□□□ -1.54
PTPN4-205ENST00000433888 ADSLP30566 484 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-205ENST00000433888 CXCR5P32302 372 aa5.42□□□□□ -1.54
PTPN4-205ENST00000433888 PTPN7P35236 360 aa5.42□□□□□ -1.54
PTPN4-205ENST00000433888 SP140Q13342 867 aa5.42□□□□□ -1.54
PTPN4-205ENST00000433888 MPP3Q13368 585 aa5.42□□□□□ -1.54
PTPN4-205ENST00000433888 MAPKAPK5Q8IW41 473 aa5.42□□□□□ -1.54
PTPN4-205ENST00000433888 SLC9A6Q92581 669 aa5.42□□□□□ -1.54
PTPN4-205ENST00000433888 HOXB13Q92826 284 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-205ENST00000433888 RAX2Q96IS3 184 aa5.42□□□□□ -1.54
PTPN4-205ENST00000433888 ACAP3Q96P50 834 aa5.42□□□□□ -1.54
PTPN4-205ENST00000433888 LRFN3Q9BTN0 628 aa5.42□□□□□ -1.54
PTPN4-205ENST00000433888 INO80B-WBP1J3KQ70 363 aa5.41□□□□□ -1.54
PTPN4-205ENST00000433888 AKR1B10O60218 316 aa5.41□□□□□ -1.54
PTPN4-205ENST00000433888 ZEB2O60315 1214 aa5.41□□□□□ -1.54
PTPN4-205ENST00000433888 ITGAMP11215 1152 aa5.41□□□□□ -1.54
PTPN4-205ENST00000433888 MYCLP1P12525 358 aaPredicted RBP5.41□□□□□ -1.54
PTPN4-205ENST00000433888 SREBF1P36956 1147 aa5.41□□□□□ -1.54
PTPN4-205ENST00000433888 MRPS9P82933 396 aaKnown RBP5.41□□□□□ -1.54
PTPN4-205ENST00000433888 CDK17Q00537 523 aa5.41□□□□□ -1.54
PTPN4-205ENST00000433888 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.41□□□□□ -1.54
PTPN4-205ENST00000433888 ZKSCAN2Q63HK3 967 aa5.41□□□□□ -1.54
PTPN4-205ENST00000433888 TSHZ3Q63HK5 1081 aa5.41□□□□□ -1.54
PTPN4-205ENST00000433888 MED25Q71SY5 747 aa5.41□□□□□ -1.54
PTPN4-205ENST00000433888 KCNK18Q7Z418 384 aa5.41□□□□□ -1.54
PTPN4-205ENST00000433888 RNF180Q86T96 592 aa5.41□□□□□ -1.54
PTPN4-205ENST00000433888 ORAI2Q96SN7 254 aa5.41□□□□□ -1.54
PTPN4-205ENST00000433888 INO80BQ9C086 356 aaPredicted RBP5.41□□□□□ -1.54
PTPN4-205ENST00000433888 RNF181Q9P0P0 153 aa5.41□□□□□ -1.54
PTPN4-205ENST00000433888 SPATA31A6Q5VVP1 1343 aa5.41□□□□□ -1.54
PTPN4-205ENST00000433888 ULK1O75385 1050 aa5.4□□□□□ -1.54
PTPN4-205ENST00000433888 SESN3P58005 492 aa5.4□□□□□ -1.54
PTPN4-205ENST00000433888 OCA2Q04671 838 aa5.4□□□□□ -1.54
PTPN4-205ENST00000433888 ZNF169Q14929 603 aaPredicted RBP5.4□□□□□ -1.54
PTPN4-205ENST00000433888 ADRM1Q16186 407 aa5.4□□□□□ -1.54
PTPN4-205ENST00000433888 ERCC6LQ2NKX8 1250 aa5.4□□□□□ -1.54
PTPN4-205ENST00000433888 CMIPQ8IY22 773 aa5.4□□□□□ -1.54
PTPN4-205ENST00000433888 BOLLQ8N9W6 283 aaKnown RBP5.4□□□□□ -1.54
PTPN4-205ENST00000433888 LMBR1Q8WVP7 490 aa5.4□□□□□ -1.54
PTPN4-205ENST00000433888 USP7Q93009 1102 aa5.4□□□□□ -1.54
PTPN4-205ENST00000433888 NACC2Q96BF6 587 aa5.4□□□□□ -1.54
PTPN4-205ENST00000433888 BOD1Q96IK1 185 aa5.4□□□□□ -1.54
PTPN4-205ENST00000433888 PHACTR3Q96KR7 559 aa5.4□□□□□ -1.54
PTPN4-205ENST00000433888 Q96MF0 132 aa5.4□□□□□ -1.54
PTPN4-205ENST00000433888 IFT22Q9H7X7 185 aa5.4□□□□□ -1.54
PTPN4-205ENST00000433888 FOXJ2Q9P0K8 574 aa5.4□□□□□ -1.54
PTPN4-205ENST00000433888 ENPP3O14638 875 aa5.39□□□□□ -1.55
PTPN4-205ENST00000433888 PRSS23O95084 383 aa5.39□□□□□ -1.55
PTPN4-205ENST00000433888 FDXRP22570 491 aa5.39□□□□□ -1.55
PTPN4-205ENST00000433888 GUCY1A2P33402 732 aa5.39□□□□□ -1.55
PTPN4-205ENST00000433888 RARRES1P49788 294 aa5.39□□□□□ -1.55
PTPN4-205ENST00000433888 ELLP55199 621 aaPredicted RBP5.39□□□□□ -1.55
PTPN4-205ENST00000433888 SIM1P81133 766 aaPredicted RBP5.39□□□□□ -1.55
PTPN4-205ENST00000433888 PPP3CAQ08209 521 aa5.39□□□□□ -1.55
PTPN4-205ENST00000433888 RRP12Q5JTH9 1297 aaKnown RBP5.39□□□□□ -1.55
PTPN4-205ENST00000433888 AFMIDQ63HM1 303 aa5.39□□□□□ -1.55
PTPN4-205ENST00000433888 SLC44A3Q8N4M1 653 aa5.39□□□□□ -1.55
PTPN4-205ENST00000433888 FBXO18Q8NFZ0 1043 aa5.39□□□□□ -1.55
PTPN4-205ENST00000433888 CAGE1Q8TC20 777 aa5.39□□□□□ -1.55
PTPN4-205ENST00000433888 FATE1Q969F0 183 aa5.39□□□□□ -1.55
PTPN4-205ENST00000433888 FUBP3Q96I24 572 aaKnown RBP eCLIP5.39□□□□□ -1.55
PTPN4-205ENST00000433888 ZSWIM1Q9BR11 485 aa5.39□□□□□ -1.55
PTPN4-205ENST00000433888 MRI1Q9BV20 369 aa5.39□□□□□ -1.55
PTPN4-205ENST00000433888 ALOXE3Q9BYJ1 711 aa5.39□□□□□ -1.55
PTPN4-205ENST00000433888 A0A1B0GTW7 788 aa5.38□□□□□ -1.55
PTPN4-205ENST00000433888 C1QL1O75973 258 aa5.38□□□□□ -1.55
PTPN4-205ENST00000433888 GCSHP23434 173 aa5.38□□□□□ -1.55
PTPN4-205ENST00000433888 KRTAP10-11P60412 298 aa5.38□□□□□ -1.55
PTPN4-205ENST00000433888 MUM1Q2TAK8 710 aa5.38□□□□□ -1.55
PTPN4-205ENST00000433888 OTUD7BQ6GQQ9 843 aa5.38□□□□□ -1.55
PTPN4-205ENST00000433888 Q6ZNX1 250 aa5.38□□□□□ -1.55
PTPN4-205ENST00000433888 HDGFL2Q7Z4V5 671 aaPredicted RBP5.38□□□□□ -1.55
PTPN4-205ENST00000433888 STRA8Q7Z7C7 330 aa5.38□□□□□ -1.55
PTPN4-205ENST00000433888 DRC7Q8IY82 874 aa5.38□□□□□ -1.55
PTPN4-205ENST00000433888 GREM2Q9H772 168 aa5.38□□□□□ -1.55
PTPN4-205ENST00000433888 TLK1Q9UKI8 766 aa5.38□□□□□ -1.55
PTPN4-205ENST00000433888 SIK3Q9Y2K2 1263 aa5.38□□□□□ -1.55
PTPN4-205ENST00000433888 MGST3O14880 152 aa5.37□□□□□ -1.55
PTPN4-205ENST00000433888 IGLV2-14P01704 120 aa5.37□□□□□ -1.55
PTPN4-205ENST00000433888 FGFR4P22455 802 aa5.37□□□□□ -1.55
PTPN4-205ENST00000433888 ECHS1P30084 290 aa5.37□□□□□ -1.55
PTPN4-205ENST00000433888 RAP2BP61225 183 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms