RNA–Protein interactions for RNA: ENST00000432725.1

SF1-208, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-208ENST00000432725 THNSL1Q8IYQ7 743 aa17.17■□□□□ 0.34
SF1-208ENST00000432725 SCFD1Q8WVM8 642 aa17.17■□□□□ 0.34
SF1-208ENST00000432725 MRPL9Q9BYD2 267 aaKnown RBP17.17■□□□□ 0.34
SF1-208ENST00000432725 ST6GALNAC4Q9H4F1 302 aa17.17■□□□□ 0.34
SF1-208ENST00000432725 ZHX3Q9H4I2 956 aa17.17■□□□□ 0.34
SF1-208ENST00000432725 RTN4Q9NQC3 1192 aaKnown RBP17.17■□□□□ 0.34
SF1-208ENST00000432725 XPNPEP1Q9NQW7 623 aa17.17■□□□□ 0.34
SF1-208ENST00000432725 TLR9Q9NR96 1032 aa17.17■□□□□ 0.34
SF1-208ENST00000432725 AGPAT5Q9NUQ2 364 aa17.17■□□□□ 0.34
SF1-208ENST00000432725 TRAF3IP3Q9Y228 551 aa17.17■□□□□ 0.34
SF1-208ENST00000432725 PCDHB13Q9Y5F0 798 aa17.17■□□□□ 0.34
SF1-208ENST00000432725 ITIH6Q6UXX5 1313 aa17.17■□□□□ 0.34
SF1-208ENST00000432725 NPHP3-ACAD11A0A0J9YXS1 232 aa17.16■□□□□ 0.34
SF1-208ENST00000432725 TRIM49BA6NDI0 452 aa17.16■□□□□ 0.34
SF1-208ENST00000432725 FSCN2O14926 492 aa17.16■□□□□ 0.34
SF1-208ENST00000432725 LINC01565O15544 149 aa17.16■□□□□ 0.34
SF1-208ENST00000432725 DGAT1O75907 488 aa17.16■□□□□ 0.34
SF1-208ENST00000432725 CSPG5O95196 566 aa17.16■□□□□ 0.34
SF1-208ENST00000432725 PPM1AP35813 382 aa17.16■□□□□ 0.34
SF1-208ENST00000432725 COPB1P53618 953 aaKnown RBP17.16■□□□□ 0.34
SF1-208ENST00000432725 PMS1P54277 932 aaKnown RBP17.16■□□□□ 0.34
SF1-208ENST00000432725 POU5F1BQ06416 359 aa17.16■□□□□ 0.34
SF1-208ENST00000432725 DLX2Q07687 328 aaPredicted RBP17.16■□□□□ 0.34
SF1-208ENST00000432725 MXD4Q14582 209 aaPredicted RBP17.16■□□□□ 0.34
SF1-208ENST00000432725 KRT31Q15323 416 aa17.16■□□□□ 0.34
SF1-208ENST00000432725 KNOP1Q1ED39 458 aaKnown RBP17.16■□□□□ 0.34
SF1-208ENST00000432725 SPECC1LQ69YQ0 1117 aa17.16■□□□□ 0.34
SF1-208ENST00000432725 CCDC186Q7Z3E2 898 aa17.16■□□□□ 0.34
SF1-208ENST00000432725 IRF2BP1Q8IU81 584 aa17.16■□□□□ 0.34
SF1-208ENST00000432725 ZC3H3Q8IXZ2 948 aaKnown RBP17.16■□□□□ 0.34
SF1-208ENST00000432725 MYCT1Q8N699 235 aa17.16■□□□□ 0.34
SF1-208ENST00000432725 EFHBQ8N7U6 833 aa17.16■□□□□ 0.34
SF1-208ENST00000432725 MCPH1Q8NEM0 835 aa17.16■□□□□ 0.34
SF1-208ENST00000432725 GOLGA5Q8TBA6 731 aa17.16■□□□□ 0.34
SF1-208ENST00000432725 HELQQ8TDG4 1101 aa17.16■□□□□ 0.34
SF1-208ENST00000432725 IQCDQ96DY2 449 aa17.16■□□□□ 0.34
SF1-208ENST00000432725 ZNF558Q96NG5 402 aa17.16■□□□□ 0.34
SF1-208ENST00000432725 NAP1L5Q96NT1 182 aaPredicted RBP17.16■□□□□ 0.34
SF1-208ENST00000432725 IGFLR1Q9H665 355 aa17.16■□□□□ 0.34
SF1-208ENST00000432725 MINDY3Q9H8M7 445 aa17.16■□□□□ 0.34
SF1-208ENST00000432725 MRPL44Q9H9J2 332 aaKnown RBP17.16■□□□□ 0.34
SF1-208ENST00000432725 FAM105AQ9NUU6 356 aa17.16■□□□□ 0.34
SF1-208ENST00000432725 CGNQ9P2M7 1197 aaKnown RBP17.16■□□□□ 0.34
SF1-208ENST00000432725 FAM50BQ9Y247 325 aa17.16■□□□□ 0.34
SF1-208ENST00000432725 KIAA1671Q9BY89 1806 aa17.16■□□□□ 0.34
SF1-208ENST00000432725 FNDC1Q4ZHG4 1894 aaPredicted RBP17.16■□□□□ 0.34
SF1-208ENST00000432725 A0A1W2PQC6 194 aa17.15■□□□□ 0.34
SF1-208ENST00000432725 N4BP3O15049 544 aa17.15■□□□□ 0.34
SF1-208ENST00000432725 CALUO43852 315 aaPredicted RBP17.15■□□□□ 0.34
SF1-208ENST00000432725 TBX10O75333 385 aa17.15■□□□□ 0.34
SF1-208ENST00000432725 RPL13P26373 211 aaKnown RBP17.15■□□□□ 0.34
SF1-208ENST00000432725 HOXA11P31270 313 aaPredicted RBP17.15■□□□□ 0.34
SF1-208ENST00000432725 MARSP56192 900 aaKnown RBP17.15■□□□□ 0.34
SF1-208ENST00000432725 ERVFC1P60507 584 aa17.15■□□□□ 0.34
SF1-208ENST00000432725 SNRPFP62306 86 aaKnown RBP17.15■□□□□ 0.34
SF1-208ENST00000432725 TRIM14Q14142 442 aa17.15■□□□□ 0.34
SF1-208ENST00000432725 PCBP1Q15365 356 aaKnown RBP eCLIP17.15■□□□□ 0.34
SF1-208ENST00000432725 TMC6Q7Z403 805 aa17.15■□□□□ 0.34
SF1-208ENST00000432725 FILIP1Q7Z7B0 1213 aa17.15■□□□□ 0.34
SF1-208ENST00000432725 RNF149Q8NC42 400 aa17.15■□□□□ 0.34
SF1-208ENST00000432725 MICAL1Q8TDZ2 1067 aa17.15■□□□□ 0.34
SF1-208ENST00000432725 KIFAP3Q92845 792 aa17.15■□□□□ 0.34
SF1-208ENST00000432725 HPS3Q969F9 1004 aa17.15■□□□□ 0.34
SF1-208ENST00000432725 HVCN1Q96D96 273 aa17.15■□□□□ 0.34
SF1-208ENST00000432725 KCTD10Q9H3F6 313 aa17.15■□□□□ 0.34
SF1-208ENST00000432725 CD320Q9NPF0 282 aa17.15■□□□□ 0.34
SF1-208ENST00000432725 SPG21Q9NZD8 308 aa17.15■□□□□ 0.34
SF1-208ENST00000432725 PUF60Q9UHX1 559 aaKnown RBP17.15■□□□□ 0.34
SF1-208ENST00000432725 PCDHGC5Q9Y5F6 944 aa17.15■□□□□ 0.34
SF1-208ENST00000432725 H0YCG3 227 aa17.14■□□□□ 0.33
SF1-208ENST00000432725 HIP1RO75146 1068 aa17.14■□□□□ 0.33
SF1-208ENST00000432725 PLS3P13797 630 aa17.14■□□□□ 0.33
SF1-208ENST00000432725 ARL2P36404 184 aa17.14■□□□□ 0.33
SF1-208ENST00000432725 PBX1P40424 430 aa17.14■□□□□ 0.33
SF1-208ENST00000432725 NRIP1P48552 1158 aa17.14■□□□□ 0.33
SF1-208ENST00000432725 PTENP60484 403 aa17.14■□□□□ 0.33
SF1-208ENST00000432725 PPP2R3AQ06190 1150 aa17.14■□□□□ 0.33
SF1-208ENST00000432725 RAD51AP2Q09MP3 1159 aa17.14■□□□□ 0.33
SF1-208ENST00000432725 MYBPC2Q14324 1141 aa17.14■□□□□ 0.33
SF1-208ENST00000432725 ZNF720Q7Z2F6 126 aa17.14■□□□□ 0.33
SF1-208ENST00000432725 MRPL10Q7Z7H8 261 aaKnown RBP17.14■□□□□ 0.33
SF1-208ENST00000432725 IFNLR1Q8IU57 520 aaPredicted RBP17.14■□□□□ 0.33
SF1-208ENST00000432725 GJD3Q8N144 294 aa17.14■□□□□ 0.33
SF1-208ENST00000432725 SLC39A11Q8N1S5 342 aa17.14■□□□□ 0.33
SF1-208ENST00000432725 CCDC112Q8NEF3 446 aa17.14■□□□□ 0.33
SF1-208ENST00000432725 TMEM174Q8WUU8 243 aa17.14■□□□□ 0.33
SF1-208ENST00000432725 KCNN1Q92952 543 aa17.14■□□□□ 0.33
SF1-208ENST00000432725 PGBD4Q96DM1 585 aa17.14■□□□□ 0.33
SF1-208ENST00000432725 MSLNLQ96KJ4 702 aa17.14■□□□□ 0.33
SF1-208ENST00000432725 TLE6Q9H808 572 aa17.14■□□□□ 0.33
SF1-208ENST00000432725 PRKAG3Q9UGI9 489 aa17.14■□□□□ 0.33
SF1-208ENST00000432725 PCDHB2Q9Y5E7 798 aa17.14■□□□□ 0.33
SF1-208ENST00000432725 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.14■□□□□ 0.333e-9■■□□□ 12.9
SF1-208ENST00000432725 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.14■□□□□ 0.33
SF1-208ENST00000432725 TCF20Q9UGU0 1960 aaKnown RBP17.13■□□□□ 0.33
SF1-208ENST00000432725 LGALS16A8MUM7 142 aa17.13■□□□□ 0.33
SF1-208ENST00000432725 CETN3O15182 167 aa17.13■□□□□ 0.33
SF1-208ENST00000432725 OFD1O75665 1012 aa17.13■□□□□ 0.33
SF1-208ENST00000432725 GCNT3O95395 438 aa17.13■□□□□ 0.33
SF1-208ENST00000432725 PBX3P40426 434 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms