RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 MYEOVQ96EZ4 313 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 SLC2A13Q96QE2 648 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 CEP89Q96ST8 783 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 TTPALQ9BTX7 342 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 MRI1Q9BV20 369 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 IKZF4Q9H2S9 585 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 AJAP1Q9UKB5 411 aaPredicted RBP4.57□□□□□ -1.68
CLK1-204ENST00000432425 CADPSQ9ULU8 1353 aa4.57□□□□□ -1.68
CLK1-204ENST00000432425 TRIM75PA6NK02 468 aa4.56□□□□□ -1.68
CLK1-204ENST00000432425 NDUFA10O95299 355 aa4.56□□□□□ -1.68
CLK1-204ENST00000432425 HLA-DOAP06340 250 aa4.56□□□□□ -1.68
CLK1-204ENST00000432425 CHN2P52757 468 aa4.56□□□□□ -1.68
CLK1-204ENST00000432425 PDCD4Q53EL6 469 aaKnown RBP4.56□□□□□ -1.68
CLK1-204ENST00000432425 LAIR1Q6GTX8 287 aa4.56□□□□□ -1.68
CLK1-204ENST00000432425 RPUSD2Q8IZ73 545 aaKnown RBP4.56□□□□□ -1.68
CLK1-204ENST00000432425 STON2Q8WXE9 905 aa4.56□□□□□ -1.68
CLK1-204ENST00000432425 CYFIP2Q96F07 1278 aa4.56□□□□□ -1.68
CLK1-204ENST00000432425 MLST8Q9BVC4 326 aa4.56□□□□□ -1.68
CLK1-204ENST00000432425 REXO4Q9GZR2 422 aaKnown RBP4.56□□□□□ -1.68
CLK1-204ENST00000432425 MANSC1Q9H8J5 431 aa4.56□□□□□ -1.68
CLK1-204ENST00000432425 ZNF277Q9NRM2 450 aaPredicted RBP4.56□□□□□ -1.68
CLK1-204ENST00000432425 MKS1Q9NXB0 559 aa4.56□□□□□ -1.68
CLK1-204ENST00000432425 SAP30BPQ9UHR5 308 aaKnown RBP4.56□□□□□ -1.68
CLK1-204ENST00000432425 ATP11BQ9Y2G3 1177 aa4.56□□□□□ -1.68
CLK1-204ENST00000432425 USP15Q9Y4E8 981 aaPredicted RBP4.56□□□□□ -1.68
CLK1-204ENST00000432425 ATRNL1Q5VV63 1379 aa4.55□□□□□ -1.68
CLK1-204ENST00000432425 DRGXA6NNA5 263 aa4.55□□□□□ -1.68
CLK1-204ENST00000432425 ZNF185O15231 689 aa4.55□□□□□ -1.68
CLK1-204ENST00000432425 GPR32O75388 356 aa4.55□□□□□ -1.68
CLK1-204ENST00000432425 MT-CO1P00395 513 aa4.55□□□□□ -1.68
CLK1-204ENST00000432425 POMCP01189 267 aa4.55□□□□□ -1.68
CLK1-204ENST00000432425 CDK11BP21127 795 aaKnown RBP4.55□□□□□ -1.68
CLK1-204ENST00000432425 ZFP36P26651 326 aaKnown RBP4.55□□□□□ -1.68
CLK1-204ENST00000432425 GUCY1A2P33402 732 aa4.55□□□□□ -1.68
CLK1-204ENST00000432425 IARSP41252 1262 aaKnown RBP4.55□□□□□ -1.68
CLK1-204ENST00000432425 ALDH1A3P47895 512 aa4.55□□□□□ -1.68
CLK1-204ENST00000432425 GUCY2FP51841 1108 aa4.55□□□□□ -1.68
CLK1-204ENST00000432425 FSTL1Q12841 308 aa4.55□□□□□ -1.68
CLK1-204ENST00000432425 SEPT2Q15019 361 aa4.55□□□□□ -1.68
CLK1-204ENST00000432425 ACAP2Q15057 778 aa4.55□□□□□ -1.68
CLK1-204ENST00000432425 FAM102AQ5T9C2 384 aaPredicted RBP4.55□□□□□ -1.68
CLK1-204ENST00000432425 PPM1NQ8N819 430 aa4.55□□□□□ -1.68
CLK1-204ENST00000432425 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.55□□□□□ -1.68
CLK1-204ENST00000432425 CCHCR1Q8TD31 782 aa4.55□□□□□ -1.68
CLK1-204ENST00000432425 CASKIN2Q8WXE0 1202 aa4.55□□□□□ -1.68
CLK1-204ENST00000432425 C7orf25Q9BPX7 421 aa4.55□□□□□ -1.68
CLK1-204ENST00000432425 HS3ST4Q9Y661 456 aa4.55□□□□□ -1.68
CLK1-204ENST00000432425 FPGT-TNNI3KV9GXZ4 949 aa4.55□□□□□ -1.68
CLK1-204ENST00000432425 CENPVL1A0A0U1RR11 272 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 FOXN1O15353 648 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 LPXNO60711 386 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 BMPR1AP36894 532 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 ITKQ08881 620 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 CRB2Q5IJ48 1285 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 SYDE2Q5VT97 1194 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 CPEB3Q8NE35 698 aaKnown RBP4.54□□□□□ -1.68
CLK1-204ENST00000432425 C1orf162Q8NEQ5 155 aaPredicted RBP4.54□□□□□ -1.68
CLK1-204ENST00000432425 NRG4Q8WWG1 115 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 MTMR8Q96EF0 704 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 TEX101Q9BY14 249 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 TRHDEQ9UKU6 1024 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 POLR2AP24928 1970 aaKnown RBP4.54□□□□□ -1.68
CLK1-204ENST00000432425 TMEM200CA6NKL6 621 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 B3GALT2O43825 422 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 MYBL2P10244 700 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 KRT4P19013 534 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 FPR1P21462 350 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 CDKN1CP49918 316 aaPredicted RBP4.54□□□□□ -1.68
CLK1-204ENST00000432425 SLC16A1P53985 500 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 GUCY1B3Q02153 619 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 FAM50AQ14320 339 aaKnown RBP4.54□□□□□ -1.68
CLK1-204ENST00000432425 ATP2B3Q16720 1220 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 ABCB5Q2M3G0 1257 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 BEAN1Q3B7T3 259 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 AGAP9Q5VTM2 703 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 OTUD7BQ6GQQ9 843 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 ZNF529Q6P280 563 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 MED25Q71SY5 747 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 MIGA2Q7L4E1 593 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 VRK3Q8IV63 474 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 RHOT2Q8IXI1 618 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 DPF2Q92785 391 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 FUBP3Q96I24 572 aaKnown RBP eCLIP4.54□□□□□ -1.683e-7■■■□□ 18.4
CLK1-204ENST00000432425 CYP4F11Q9HBI6 524 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 ANKFY1Q9P2R3 1169 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 INTUQ9ULD6 942 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 SIK3Q9Y2K2 1263 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 DMRT1Q9Y5R6 373 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 ACTL7AQ9Y615 435 aa4.54□□□□□ -1.68
CLK1-204ENST00000432425 PNPLA7Q6ZV29 1317 aa4.53□□□□□ -1.68
CLK1-204ENST00000432425 WNT10BO00744 389 aa4.53□□□□□ -1.68
CLK1-204ENST00000432425 XPOTO43592 962 aaKnown RBP4.53□□□□□ -1.68
CLK1-204ENST00000432425 NDUFS2O75306 463 aa4.53□□□□□ -1.68
CLK1-204ENST00000432425 ALAS1P13196 640 aa4.53□□□□□ -1.68
CLK1-204ENST00000432425 DDX6P26196 483 aaKnown RBP eCLIP4.53□□□□□ -1.68
CLK1-204ENST00000432425 SLC6A9P48067 706 aa4.53□□□□□ -1.68
CLK1-204ENST00000432425 INHBEP58166 350 aa4.53□□□□□ -1.68
CLK1-204ENST00000432425 INAVAQ3KP66 663 aa4.53□□□□□ -1.68
CLK1-204ENST00000432425 TSHZ3Q63HK5 1081 aa4.53□□□□□ -1.68
CLK1-204ENST00000432425 METRNLQ641Q3 311 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms