RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 NKD2Q969F2 451 aaPredicted RBP16.68■□□□□ 0.26
CSNK1E-208ENST00000431611 KIFC3Q9BVG8 833 aa16.68■□□□□ 0.26
CSNK1E-208ENST00000431611 BHMT2Q9H2M3 363 aa16.68■□□□□ 0.26
CSNK1E-208ENST00000431611 POLD4Q9HCU8 107 aa16.68■□□□□ 0.26
CSNK1E-208ENST00000431611 DAXXQ9UER7 740 aaPredicted RBP16.68■□□□□ 0.26
CSNK1E-208ENST00000431611 NOL7Q9UMY1 257 aaKnown RBP16.68■□□□□ 0.26
CSNK1E-208ENST00000431611 PLXNA3P51805 1871 aa16.67■□□□□ 0.26
CSNK1E-208ENST00000431611 ANHXE9PGG2 379 aa16.67■□□□□ 0.26
CSNK1E-208ENST00000431611 C8AP07357 584 aa16.67■□□□□ 0.26
CSNK1E-208ENST00000431611 HNRNPA1P09651 372 aaKnown RBP eCLIP16.67■□□□□ 0.26
CSNK1E-208ENST00000431611 TRAPPC10P48553 1259 aa16.67■□□□□ 0.26
CSNK1E-208ENST00000431611 FXR2P51116 673 aaKnown RBP eCLIP16.67■□□□□ 0.26
CSNK1E-208ENST00000431611 HMGN5P82970 282 aaKnown RBP16.67■□□□□ 0.26
CSNK1E-208ENST00000431611 ANGPT1Q15389 498 aa16.67■□□□□ 0.26
CSNK1E-208ENST00000431611 ECM1Q16610 540 aa16.67■□□□□ 0.26
CSNK1E-208ENST00000431611 PPM1LQ5SGD2 360 aa16.67■□□□□ 0.26
CSNK1E-208ENST00000431611 NT5DC1Q5TFE4 455 aa16.67■□□□□ 0.26
CSNK1E-208ENST00000431611 ATF7IP2Q5U623 682 aa16.67■□□□□ 0.26
CSNK1E-208ENST00000431611 FAM184AQ8NB25 1140 aa16.67■□□□□ 0.26
CSNK1E-208ENST00000431611 GPR152Q8TDT2 470 aa16.67■□□□□ 0.26
CSNK1E-208ENST00000431611 KIFAP3Q92845 792 aa16.67■□□□□ 0.26
CSNK1E-208ENST00000431611 LRWD1Q9UFC0 647 aa16.67■□□□□ 0.26
CSNK1E-208ENST00000431611 KIAA1024Q9UPX6 916 aa16.67■□□□□ 0.26
CSNK1E-208ENST00000431611 ZFP37Q9Y6Q3 630 aaPredicted RBP16.67■□□□□ 0.26
CSNK1E-208ENST00000431611 C2orf16Q68DN1 1984 aa16.67■□□□□ 0.26
CSNK1E-208ENST00000431611 K7ERI5 159 aa16.66■□□□□ 0.26
CSNK1E-208ENST00000431611 ADAM12O43184 909 aa16.66■□□□□ 0.26
CSNK1E-208ENST00000431611 B3GAT3O94766 335 aa16.66■□□□□ 0.26
CSNK1E-208ENST00000431611 HTR4Q13639 388 aa16.66■□□□□ 0.26
CSNK1E-208ENST00000431611 GLRA4Q5JXX5 417 aa16.66■□□□□ 0.26
CSNK1E-208ENST00000431611 ERICH6BQ5W0A0 696 aa16.66■□□□□ 0.26
CSNK1E-208ENST00000431611 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.66■□□□□ 0.26
CSNK1E-208ENST00000431611 USP34Q70CQ2 3546 aa16.66■□□□□ 0.26
CSNK1E-208ENST00000431611 APBB1IPQ7Z5R6 666 aaPredicted RBP16.66■□□□□ 0.26
CSNK1E-208ENST00000431611 C4orf32Q8N8J7 132 aa16.66■□□□□ 0.26
CSNK1E-208ENST00000431611 TBC1D17Q9HA65 648 aa16.66■□□□□ 0.26
CSNK1E-208ENST00000431611 POLIQ9UNA4 740 aa16.66■□□□□ 0.26
CSNK1E-208ENST00000431611 NUMBLQ9Y6R0 609 aa16.66■□□□□ 0.26
CSNK1E-208ENST00000431611 TDRD15B5MCY1 1934 aaKnown RBP16.66■□□□□ 0.26
CSNK1E-208ENST00000431611 ZFHX2Q9C0A1 2572 aaPredicted RBP16.66■□□□□ 0.26
CSNK1E-208ENST00000431611 TMEM189-UBE2V1I3L0A0 370 aa16.65■□□□□ 0.26
CSNK1E-208ENST00000431611 XYLBO75191 536 aa16.65■□□□□ 0.26
CSNK1E-208ENST00000431611 FGFR3P22607 806 aa16.65■□□□□ 0.26
CSNK1E-208ENST00000431611 HOXA9P31269 272 aa16.65■□□□□ 0.26
CSNK1E-208ENST00000431611 OR1D2P34982 312 aa16.65■□□□□ 0.26
CSNK1E-208ENST00000431611 NTHL1P78549 312 aa16.65■□□□□ 0.26
CSNK1E-208ENST00000431611 RAB33AQ14088 237 aa16.65■□□□□ 0.26
CSNK1E-208ENST00000431611 PDIA5Q14554 519 aa16.65■□□□□ 0.26
CSNK1E-208ENST00000431611 NBR1Q14596 966 aa16.65■□□□□ 0.26
CSNK1E-208ENST00000431611 DCLRE1AQ6PJP8 1040 aa16.65■□□□□ 0.26
CSNK1E-208ENST00000431611 ST13P5Q8NFI4 369 aaPredicted RBP16.65■□□□□ 0.26
CSNK1E-208ENST00000431611 SNX29Q8TEQ0 813 aa16.65■□□□□ 0.26
CSNK1E-208ENST00000431611 ZSCAN31Q96LW9 406 aaPredicted RBP16.65■□□□□ 0.26
CSNK1E-208ENST00000431611 PPP1R10Q96QC0 940 aaKnown RBP16.65■□□□□ 0.26
CSNK1E-208ENST00000431611 SLC2A4RGQ9NR83 387 aa16.65■□□□□ 0.26
CSNK1E-208ENST00000431611 DDX19AQ9NUU7 478 aaKnown RBP16.65■□□□□ 0.26
CSNK1E-208ENST00000431611 CDH7Q9ULB5 785 aa16.65■□□□□ 0.26
CSNK1E-208ENST00000431611 TNFSF13BQ9Y275 285 aa16.65■□□□□ 0.26
CSNK1E-208ENST00000431611 STK24Q9Y6E0 443 aa16.65■□□□□ 0.26
CSNK1E-208ENST00000431611 CCDC169A6NNP5 214 aa16.64■□□□□ 0.25
CSNK1E-208ENST00000431611 CCL16O15467 120 aa16.64■□□□□ 0.25
CSNK1E-208ENST00000431611 CLCNKBP51801 687 aa16.64■□□□□ 0.25
CSNK1E-208ENST00000431611 AXDND1Q5T1B0 1012 aaPredicted RBP16.64■□□□□ 0.25
CSNK1E-208ENST00000431611 PHLDB3Q6NSJ2 640 aa16.64■□□□□ 0.25
CSNK1E-208ENST00000431611 SLC7A14Q8TBB6 771 aa16.64■□□□□ 0.25
CSNK1E-208ENST00000431611 UROC1Q96N76 676 aa16.64■□□□□ 0.25
CSNK1E-208ENST00000431611 RAB34Q9BZG1 259 aa16.64■□□□□ 0.25
CSNK1E-208ENST00000431611 ARHGEF3Q9NR81 526 aa16.64■□□□□ 0.25
CSNK1E-208ENST00000431611 MTRRQ9UBK8 725 aa16.64■□□□□ 0.25
CSNK1E-208ENST00000431611 TRAPPC3O43617 180 aa16.63■□□□□ 0.25
CSNK1E-208ENST00000431611 IGFBP6P24592 240 aaPredicted RBP16.63■□□□□ 0.25
CSNK1E-208ENST00000431611 YARSP54577 528 aaKnown RBP16.63■□□□□ 0.25
CSNK1E-208ENST00000431611 PEX3P56589 373 aa16.63■□□□□ 0.25
CSNK1E-208ENST00000431611 PTGDRQ13258 359 aa16.63■□□□□ 0.25
CSNK1E-208ENST00000431611 UPP1Q16831 310 aa16.63■□□□□ 0.25
CSNK1E-208ENST00000431611 UVSSAQ2YD98 709 aa16.63■□□□□ 0.25
CSNK1E-208ENST00000431611 PARM1Q6UWI2 310 aa16.63■□□□□ 0.25
CSNK1E-208ENST00000431611 CEP120Q8N960 986 aa16.63■□□□□ 0.25
CSNK1E-208ENST00000431611 IGSF22Q8N9C0 903 aa16.63■□□□□ 0.25
CSNK1E-208ENST00000431611 FGF13Q92913 245 aa16.63■□□□□ 0.25
CSNK1E-208ENST00000431611 FGF14Q92915 247 aa16.63■□□□□ 0.25
CSNK1E-208ENST00000431611 RPP25Q9BUL9 199 aaKnown RBP16.63■□□□□ 0.25
CSNK1E-208ENST00000431611 CCDC94Q9BW85 323 aaPredicted RBP16.63■□□□□ 0.25
CSNK1E-208ENST00000431611 GOLGA2P5Q9HBQ8 144 aa16.63■□□□□ 0.25
CSNK1E-208ENST00000431611 SH2B1Q9NRF2 756 aaPredicted RBP16.63■□□□□ 0.25
CSNK1E-208ENST00000431611 DNM3Q9UQ16 869 aa16.63■□□□□ 0.25
CSNK1E-208ENST00000431611 CDY1Q9Y6F8 540 aa16.63■□□□□ 0.25
CSNK1E-208ENST00000431611 PHLPP2Q6ZVD8 1323 aa16.63■□□□□ 0.25
CSNK1E-208ENST00000431611 SMIM28A0A1B0GU29 152 aa16.62■□□□□ 0.25
CSNK1E-208ENST00000431611 E9PMD0 336 aa16.62■□□□□ 0.25
CSNK1E-208ENST00000431611 POU2F2P09086 479 aa16.62■□□□□ 0.25
CSNK1E-208ENST00000431611 U2AF2P26368 475 aaKnown RBP eCLIP16.62■□□□□ 0.253e-11■■□□□ 12.7
CSNK1E-208ENST00000431611 GRM5P41594 1212 aa16.62■□□□□ 0.25
CSNK1E-208ENST00000431611 NPTX2P47972 431 aa16.62■□□□□ 0.25
CSNK1E-208ENST00000431611 TOB1P50616 345 aaPredicted RBP16.62■□□□□ 0.25
CSNK1E-208ENST00000431611 GPC5P78333 572 aa16.62■□□□□ 0.25
CSNK1E-208ENST00000431611 ZNF568Q3ZCX4 644 aa16.62■□□□□ 0.25
CSNK1E-208ENST00000431611 SPECC1Q5M775 1068 aa16.62■□□□□ 0.25
CSNK1E-208ENST00000431611 KRT79Q5XKE5 535 aa16.62■□□□□ 0.25
CSNK1E-208ENST00000431611 CD300LGQ6UXG3 332 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms