RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 CLIC2O15247 247 aa20.06■□□□□ 0.8
RFTN1-202ENST00000431547 DDHD2O94830 711 aa20.06■□□□□ 0.8
RFTN1-202ENST00000431547 CXCL8P10145 99 aa20.06■□□□□ 0.8
RFTN1-202ENST00000431547 PPP1R2P41236 205 aa20.06■□□□□ 0.8
RFTN1-202ENST00000431547 DSC1Q08554 894 aa20.06■□□□□ 0.8
RFTN1-202ENST00000431547 MYBPC2Q14324 1141 aa20.06■□□□□ 0.8
RFTN1-202ENST00000431547 HSP90AA2PQ14568 343 aaPredicted RBP20.06■□□□□ 0.8
RFTN1-202ENST00000431547 SLC9A9Q8IVB4 645 aa20.06■□□□□ 0.8
RFTN1-202ENST00000431547 CD302Q8IX05 232 aa20.06■□□□□ 0.8
RFTN1-202ENST00000431547 GPD1LQ8N335 351 aa20.06■□□□□ 0.8
RFTN1-202ENST00000431547 SAAL1Q96ER3 474 aa20.06■□□□□ 0.8
RFTN1-202ENST00000431547 FBXL18Q96ME1 805 aa20.06■□□□□ 0.8
RFTN1-202ENST00000431547 FAM193BQ96PV7 902 aaPredicted RBP20.06■□□□□ 0.8
RFTN1-202ENST00000431547 TSPAN18Q96SJ8 248 aa20.06■□□□□ 0.8
RFTN1-202ENST00000431547 FAM213AQ9BRX8 229 aa20.06■□□□□ 0.8
RFTN1-202ENST00000431547 PLAGL2Q9UPG8 496 aa20.06■□□□□ 0.8
RFTN1-202ENST00000431547 PCDHB12Q9Y5F1 795 aa20.06■□□□□ 0.8
RFTN1-202ENST00000431547 LAMA3Q16787 3333 aa20.05■□□□□ 0.8
RFTN1-202ENST00000431547 LACTBL1A8MY62 500 aa20.05■□□□□ 0.8
RFTN1-202ENST00000431547 CALUO43852 315 aaPredicted RBP20.05■□□□□ 0.8
RFTN1-202ENST00000431547 ALDH2P05091 517 aa20.05■□□□□ 0.8
RFTN1-202ENST00000431547 ALDH7A1P49419 539 aaKnown RBP20.05■□□□□ 0.8
RFTN1-202ENST00000431547 BCAR1P56945 870 aa20.05■□□□□ 0.8
RFTN1-202ENST00000431547 PPP2R3AQ06190 1150 aa20.05■□□□□ 0.8
RFTN1-202ENST00000431547 NAB2Q15742 525 aa20.05■□□□□ 0.8
RFTN1-202ENST00000431547 NFIL3Q16649 462 aa20.05■□□□□ 0.8
RFTN1-202ENST00000431547 KCNT2Q6UVM3 1135 aa20.05■□□□□ 0.8
RFTN1-202ENST00000431547 COLGALT2Q8IYK4 626 aa20.05■□□□□ 0.8
RFTN1-202ENST00000431547 XXYLT1Q8NBI6 393 aa20.05■□□□□ 0.8
RFTN1-202ENST00000431547 COLGALT1Q8NBJ5 622 aa20.05■□□□□ 0.8
RFTN1-202ENST00000431547 ZSWIM2Q8NEG5 633 aa20.05■□□□□ 0.8
RFTN1-202ENST00000431547 ZNF558Q96NG5 402 aa20.05■□□□□ 0.8
RFTN1-202ENST00000431547 PPP1R10Q96QC0 940 aaKnown RBP20.05■□□□□ 0.8
RFTN1-202ENST00000431547 TMEM175Q9BSA9 504 aa20.05■□□□□ 0.8
RFTN1-202ENST00000431547 CERS4Q9HA82 394 aa20.05■□□□□ 0.8
RFTN1-202ENST00000431547 DMAC2Q9NW81 257 aa20.05■□□□□ 0.8
RFTN1-202ENST00000431547 MTUS1Q9ULD2 1270 aa20.05■□□□□ 0.8
RFTN1-202ENST00000431547 GOLGA8IPA6NC78 632 aa20.04■□□□□ 0.8
RFTN1-202ENST00000431547 GOLGA8JA6NMD2 632 aa20.04■□□□□ 0.8
RFTN1-202ENST00000431547 B4GALT3O60512 393 aa20.04■□□□□ 0.8
RFTN1-202ENST00000431547 ZC3H11AO75152 810 aaKnown RBP eCLIP20.04■□□□□ 0.8
RFTN1-202ENST00000431547 GALTP07902 379 aa20.04■□□□□ 0.8
RFTN1-202ENST00000431547 CTNNB1P35222 781 aa20.04■□□□□ 0.8
RFTN1-202ENST00000431547 STIM1Q13586 685 aa20.04■□□□□ 0.8
RFTN1-202ENST00000431547 ZCWPW2Q504Y3 356 aa20.04■□□□□ 0.8
RFTN1-202ENST00000431547 CENPPQ6IPU0 288 aa20.04■□□□□ 0.8
RFTN1-202ENST00000431547 RBM43Q6ZSC3 357 aaKnown RBP20.04■□□□□ 0.8
RFTN1-202ENST00000431547 FBXO22Q8NEZ5 403 aa20.04■□□□□ 0.8
RFTN1-202ENST00000431547 ARNTL2Q8WYA1 636 aa20.04■□□□□ 0.8
RFTN1-202ENST00000431547 P2RX5Q93086 422 aa20.04■□□□□ 0.8
RFTN1-202ENST00000431547 DHTKD1Q96HY7 919 aaPredicted RBP20.04■□□□□ 0.8
RFTN1-202ENST00000431547 ZMAT2Q96NC0 199 aaKnown RBP20.04■□□□□ 0.8
RFTN1-202ENST00000431547 ASB7Q9H672 318 aa20.04■□□□□ 0.8
RFTN1-202ENST00000431547 SLC38A7Q9NVC3 462 aa20.04■□□□□ 0.8
RFTN1-202ENST00000431547 DNAJB4Q9UDY4 337 aa20.04■□□□□ 0.8
RFTN1-202ENST00000431547 ZNF233A6NK53 670 aa20.03■□□□□ 0.8
RFTN1-202ENST00000431547 PPP1R3GB7ZBB8 358 aa20.03■□□□□ 0.8
RFTN1-202ENST00000431547 IL18RAPO95256 599 aa20.03■□□□□ 0.8
RFTN1-202ENST00000431547 NR3C1P04150 777 aa20.03■□□□□ 0.8
RFTN1-202ENST00000431547 CD44P16070 742 aaKnown RBP20.03■□□□□ 0.8
RFTN1-202ENST00000431547 CYP2J2P51589 502 aa20.03■□□□□ 0.8
RFTN1-202ENST00000431547 TUSC3Q13454 348 aa20.03■□□□□ 0.8
RFTN1-202ENST00000431547 GRIN2CQ14957 1233 aa20.03■□□□□ 0.8
RFTN1-202ENST00000431547 ZBTB6Q15916 424 aa20.03■□□□□ 0.8
RFTN1-202ENST00000431547 GLRA4Q5JXX5 417 aa20.03■□□□□ 0.8
RFTN1-202ENST00000431547 BRSK2Q8IWQ3 736 aa20.03■□□□□ 0.8
RFTN1-202ENST00000431547 C11orf84Q9BUA3 381 aaPredicted RBP20.03■□□□□ 0.8
RFTN1-202ENST00000431547 DERAQ9Y315 318 aa20.03■□□□□ 0.8
RFTN1-202ENST00000431547 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.03■□□□□ 0.8
RFTN1-202ENST00000431547 H3BNC9 293 aa20.02■□□□□ 0.8
RFTN1-202ENST00000431547 PSMA7O14818 248 aa20.02■□□□□ 0.8
RFTN1-202ENST00000431547 EXOC3O60645 756 aa20.02■□□□□ 0.8
RFTN1-202ENST00000431547 PPM1AP35813 382 aa20.02■□□□□ 0.8
RFTN1-202ENST00000431547 SLC11A1P49279 550 aa20.02■□□□□ 0.8
RFTN1-202ENST00000431547 EDRF1Q3B7T1 1238 aa20.02■□□□□ 0.8
RFTN1-202ENST00000431547 CCDC183Q5T5S1 534 aa20.02■□□□□ 0.8
RFTN1-202ENST00000431547 CBWD2Q8IUF1 395 aa20.02■□□□□ 0.8
RFTN1-202ENST00000431547 KLHL23Q8NBE8 558 aa20.02■□□□□ 0.8
RFTN1-202ENST00000431547 FAM212AQ96EL1 285 aa20.02■□□□□ 0.8
RFTN1-202ENST00000431547 RBAKQ9NYW8 714 aaPredicted RBP20.02■□□□□ 0.8
RFTN1-202ENST00000431547 SPG21Q9NZD8 308 aa20.02■□□□□ 0.8
RFTN1-202ENST00000431547 FAN1Q9Y2M0 1017 aa20.02■□□□□ 0.8
RFTN1-202ENST00000431547 EPOPA6NHQ4 379 aa20.01■□□□□ 0.79
RFTN1-202ENST00000431547 NRP1O14786 923 aa20.01■□□□□ 0.79
RFTN1-202ENST00000431547 CCNE1P24864 410 aa20.01■□□□□ 0.79
RFTN1-202ENST00000431547 RPL13P26373 211 aaKnown RBP20.01■□□□□ 0.79
RFTN1-202ENST00000431547 PBX3P40426 434 aa20.01■□□□□ 0.79
RFTN1-202ENST00000431547 PLCB3Q01970 1234 aa20.01■□□□□ 0.79
RFTN1-202ENST00000431547 LRRC63Q05C16 580 aa20.01■□□□□ 0.79
RFTN1-202ENST00000431547 GPM6BQ13491 265 aa20.01■□□□□ 0.79
RFTN1-202ENST00000431547 SNRNP35Q16560 246 aaKnown RBP20.01■□□□□ 0.79
RFTN1-202ENST00000431547 KLHL40Q2TBA0 621 aa20.01■□□□□ 0.79
RFTN1-202ENST00000431547 FOXR2Q6PJQ5 311 aa20.01■□□□□ 0.79
RFTN1-202ENST00000431547 Q7L0L9 218 aa20.01■□□□□ 0.79
RFTN1-202ENST00000431547 SLC39A11Q8N1S5 342 aa20.01■□□□□ 0.79
RFTN1-202ENST00000431547 DEFB123Q8N688 67 aa20.01■□□□□ 0.79
RFTN1-202ENST00000431547 MLKLQ8NB16 471 aa20.01■□□□□ 0.79
RFTN1-202ENST00000431547 RDH13Q8NBN7 331 aa20.01■□□□□ 0.79
RFTN1-202ENST00000431547 NOC3LQ8WTT2 800 aaKnown RBP20.01■□□□□ 0.79
RFTN1-202ENST00000431547 UROC1Q96N76 676 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms