RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 CLCA2Q9UQC9 943 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 CHST2Q9Y4C5 530 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 NUMBLQ9Y6R0 609 aa2.88□□□□□ -1.95
CDC40-204ENST00000431461 DNAJC9-AS1A6NH13 148 aa2.87□□□□□ -1.95
CDC40-204ENST00000431461 TRIM75PA6NK02 468 aa2.87□□□□□ -1.95
CDC40-204ENST00000431461 KDM1AO60341 852 aa2.87□□□□□ -1.95
CDC40-204ENST00000431461 NCR1O76036 304 aa2.87□□□□□ -1.95
CDC40-204ENST00000431461 PRPF6O94906 941 aaKnown RBP2.87□□□□□ -1.95
CDC40-204ENST00000431461 NDUFA10O95299 355 aa2.87□□□□□ -1.95
CDC40-204ENST00000431461 S100BP04271 92 aaPredicted RBP2.87□□□□□ -1.95
CDC40-204ENST00000431461 EGR2P11161 476 aaPredicted RBP2.87□□□□□ -1.95
CDC40-204ENST00000431461 SLC9A1P19634 815 aa2.87□□□□□ -1.95
CDC40-204ENST00000431461 EPHB1P54762 984 aa2.87□□□□□ -1.95
CDC40-204ENST00000431461 MRPS9P82933 396 aaKnown RBP2.87□□□□□ -1.95
CDC40-204ENST00000431461 KLF1Q13351 362 aaPredicted RBP2.87□□□□□ -1.95
CDC40-204ENST00000431461 FSCN1Q16658 493 aaKnown RBP2.87□□□□□ -1.95
CDC40-204ENST00000431461 ABHD17BQ5VST6 288 aa2.87□□□□□ -1.95
CDC40-204ENST00000431461 SYDE2Q5VT97 1194 aa2.87□□□□□ -1.95
CDC40-204ENST00000431461 CREB3L3Q68CJ9 461 aa2.87□□□□□ -1.95
CDC40-204ENST00000431461 GLB1L2Q8IW92 636 aa2.87□□□□□ -1.95
CDC40-204ENST00000431461 UNC5BQ8IZJ1 945 aa2.87□□□□□ -1.95
CDC40-204ENST00000431461 CDYL2Q8N8U2 506 aa2.87□□□□□ -1.95
CDC40-204ENST00000431461 OR5M3Q8NGP4 307 aa2.87□□□□□ -1.95
CDC40-204ENST00000431461 OR14C36Q8NHC7 312 aa2.87□□□□□ -1.95
CDC40-204ENST00000431461 ZNF384Q8TF68 577 aa2.87□□□□□ -1.95
CDC40-204ENST00000431461 CAMKK2Q96RR4 588 aa2.87□□□□□ -1.95
CDC40-204ENST00000431461 LRFN3Q9BTN0 628 aa2.87□□□□□ -1.95
CDC40-204ENST00000431461 KRTAP2-2Q9BYT5 123 aa2.87□□□□□ -1.95
CDC40-204ENST00000431461 SLC13A1Q9BZW2 595 aa2.87□□□□□ -1.95
CDC40-204ENST00000431461 MTG2Q9H4K7 406 aa2.87□□□□□ -1.95
CDC40-204ENST00000431461 ZMAT4Q9H898 229 aa2.87□□□□□ -1.95
CDC40-204ENST00000431461 KIAA1586Q9HCI6 787 aa2.87□□□□□ -1.95
CDC40-204ENST00000431461 DDX56Q9NY93 547 aaKnown RBP2.87□□□□□ -1.95
CDC40-204ENST00000431461 HDAC5Q9UQL6 1122 aa2.87□□□□□ -1.95
CDC40-204ENST00000431461 SHTN1A0MZ66 631 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 LEFTY2O00292 366 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 OPHN1O60890 802 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 ALDH1A2O94788 518 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 ESRRBO95718 433 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 RPLP2P05387 115 aaKnown RBP2.86□□□□□ -1.95
CDC40-204ENST00000431461 PDGFRBP09619 1106 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 ZSCAN20P17040 1043 aaPredicted RBP2.86□□□□□ -1.95
CDC40-204ENST00000431461 ENPP1P22413 925 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 PTX3P26022 381 aaPredicted RBP2.86□□□□□ -1.95
CDC40-204ENST00000431461 CASRP41180 1078 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 GUCY1B3Q02153 619 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 ITKQ08881 620 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 DRICH1Q6PGQ1 229 aaPredicted RBP2.86□□□□□ -1.95
CDC40-204ENST00000431461 UNQ6494/PRO21346Q6UXR6 183 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 PLXDC1Q8IUK5 500 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 SLC44A3Q8N4M1 653 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 UBR7Q8N806 425 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 CLRN3Q8NCR9 226 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.86□□□□□ -1.95
CDC40-204ENST00000431461 PIK3C3Q8NEB9 887 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 CAGE1Q8TC20 777 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 AUTS2Q8WXX7 1259 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 CHMP4CQ96CF2 233 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 IL17RAQ96F46 866 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 CCDC136Q96JN2 1154 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 ZNF778Q96MU6 729 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 ORAI2Q96SN7 254 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 NOL10Q9BSC4 688 aaKnown RBP2.86□□□□□ -1.95
CDC40-204ENST00000431461 TCEAL9Q9UHQ7 104 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 SAP30BPQ9UHR5 308 aaKnown RBP2.86□□□□□ -1.95
CDC40-204ENST00000431461 MSRAQ9UJ68 235 aa2.86□□□□□ -1.95
CDC40-204ENST00000431461 PRR5-ARHGAP8B1AHC4 643 aa2.85□□□□□ -1.95
CDC40-204ENST00000431461 TGM5O43548 720 aa2.85□□□□□ -1.95
CDC40-204ENST00000431461 DTNBO60941 627 aa2.85□□□□□ -1.95
CDC40-204ENST00000431461 PHF2O75151 1096 aa2.85□□□□□ -1.95
CDC40-204ENST00000431461 CCND1P24385 295 aa2.85□□□□□ -1.95
CDC40-204ENST00000431461 MPLP40238 635 aa2.85□□□□□ -1.95
CDC40-204ENST00000431461 GZMKP49863 264 aa2.85□□□□□ -1.95
CDC40-204ENST00000431461 ZNF81P51508 661 aa2.85□□□□□ -1.95
CDC40-204ENST00000431461 SLC16A1P53985 500 aa2.85□□□□□ -1.95
CDC40-204ENST00000431461 CD69Q07108 199 aa2.85□□□□□ -1.95
CDC40-204ENST00000431461 UGT8Q16880 541 aa2.85□□□□□ -1.95
CDC40-204ENST00000431461 ESRP1Q6NXG1 681 aaKnown RBP2.85□□□□□ -1.95
CDC40-204ENST00000431461 LMBR1LQ6UX01 489 aa2.85□□□□□ -1.95
CDC40-204ENST00000431461 TAS1R1Q7RTX1 841 aa2.85□□□□□ -1.95
CDC40-204ENST00000431461 STRA8Q7Z7C7 330 aa2.85□□□□□ -1.95
CDC40-204ENST00000431461 ZBTB46Q86UZ6 589 aa2.85□□□□□ -1.95
CDC40-204ENST00000431461 CNTD1Q8N815 330 aa2.85□□□□□ -1.95
CDC40-204ENST00000431461 CPEB3Q8NE35 698 aaKnown RBP2.85□□□□□ -1.95
CDC40-204ENST00000431461 FATE1Q969F0 183 aa2.85□□□□□ -1.95
CDC40-204ENST00000431461 MTMR8Q96EF0 704 aa2.85□□□□□ -1.95
CDC40-204ENST00000431461 GPATCH3Q96I76 525 aa2.85□□□□□ -1.95
CDC40-204ENST00000431461 NUP88Q99567 741 aaPredicted RBP2.85□□□□□ -1.95
CDC40-204ENST00000431461 TEX101Q9BY14 249 aa2.85□□□□□ -1.95
CDC40-204ENST00000431461 PCDHB6Q9Y5E3 794 aa2.85□□□□□ -1.95
CDC40-204ENST00000431461 MYPNQ86TC9 1320 aa2.85□□□□□ -1.95
CDC40-204ENST00000431461 GOLGA8AA7E2F4 631 aa2.84□□□□□ -1.95
CDC40-204ENST00000431461 SNUPNO95149 360 aaKnown RBP2.84□□□□□ -1.95
CDC40-204ENST00000431461 APOL3O95236 402 aa2.84□□□□□ -1.95
CDC40-204ENST00000431461 LY86O95711 162 aa2.84□□□□□ -1.95
CDC40-204ENST00000431461 IGLV2-14P01704 120 aa2.84□□□□□ -1.95
CDC40-204ENST00000431461 HLA-DOAP06340 250 aa2.84□□□□□ -1.95
CDC40-204ENST00000431461 PFKMP08237 780 aa2.84□□□□□ -1.95
CDC40-204ENST00000431461 CBSLP0DN79 551 aa2.84□□□□□ -1.95
CDC40-204ENST00000431461 CBSP35520 551 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms