RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 THAP9Q9H5L6 903 aa11.96□□□□□ -0.49
CHD4-202ENST00000430771 ASB7Q9H672 318 aa11.96□□□□□ -0.49
CHD4-202ENST00000430771 PLEKHA5Q9HAU0 1116 aa11.96□□□□□ -0.49
CHD4-202ENST00000430771 METTL14Q9HCE5 456 aaKnown RBP11.96□□□□□ -0.49
CHD4-202ENST00000430771 CNTN3Q9P232 1028 aa11.96□□□□□ -0.49
CHD4-202ENST00000430771 MAGEC2Q9UBF1 373 aaPredicted RBP11.96□□□□□ -0.49
CHD4-202ENST00000430771 NFE2L3Q9Y4A8 694 aa11.96□□□□□ -0.49
CHD4-202ENST00000430771 GOLGA6L19H0YKK7 550 aa11.95□□□□□ -0.5
CHD4-202ENST00000430771 INPPL1O15357 1258 aa11.95□□□□□ -0.5
CHD4-202ENST00000430771 AKAP3O75969 853 aa11.95□□□□□ -0.5
CHD4-202ENST00000430771 ATP2A2P16615 1042 aaKnown RBP11.95□□□□□ -0.5
CHD4-202ENST00000430771 AKAP5P24588 427 aa11.95□□□□□ -0.5
CHD4-202ENST00000430771 BMP8BP34820 402 aa11.95□□□□□ -0.5
CHD4-202ENST00000430771 SPAG1Q07617 926 aa11.95□□□□□ -0.5
CHD4-202ENST00000430771 CYP24A1Q07973 514 aa11.95□□□□□ -0.5
CHD4-202ENST00000430771 GRIK3Q13003 919 aa11.95□□□□□ -0.5
CHD4-202ENST00000430771 ENOX2Q16206 610 aaKnown RBP11.95□□□□□ -0.5
CHD4-202ENST00000430771 RASIP1Q5U651 963 aa11.95□□□□□ -0.5
CHD4-202ENST00000430771 CRELD2Q6UXH1 353 aaPredicted RBP11.95□□□□□ -0.5
CHD4-202ENST00000430771 AGMOQ6ZNB7 445 aa11.95□□□□□ -0.5
CHD4-202ENST00000430771 FILIP1Q7Z7B0 1213 aa11.95□□□□□ -0.5
CHD4-202ENST00000430771 ANKRD20A12PQ8NF67 263 aa11.95□□□□□ -0.5
CHD4-202ENST00000430771 HELQQ8TDG4 1101 aa11.95□□□□□ -0.5
CHD4-202ENST00000430771 TOP1MTQ969P6 601 aa11.95□□□□□ -0.5
CHD4-202ENST00000430771 CNOT6LQ96LI5 555 aaKnown RBP11.95□□□□□ -0.5
CHD4-202ENST00000430771 SRRTQ9BXP5 876 aaKnown RBP11.95□□□□□ -0.5
CHD4-202ENST00000430771 SLC38A7Q9NVC3 462 aa11.95□□□□□ -0.5
CHD4-202ENST00000430771 CXXC1Q9P0U4 656 aaPredicted RBP11.95□□□□□ -0.5
CHD4-202ENST00000430771 INPP5FQ9Y2H2 1132 aa11.95□□□□□ -0.5
CHD4-202ENST00000430771 DERAQ9Y315 318 aa11.95□□□□□ -0.5
CHD4-202ENST00000430771 CEP290O15078 2479 aa11.95□□□□□ -0.5
CHD4-202ENST00000430771 TTC26A0AVF1 554 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 ARL5CA6NH57 179 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 MEIS3P2A8K0S8 358 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 STX10O60499 249 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 UPP2O95045 317 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 GJB5O95377 273 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 FGFR1P11362 822 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 CASP4P49662 377 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 MARSP56192 900 aaKnown RBP11.94□□□□□ -0.5
CHD4-202ENST00000430771 BFSP1Q12934 665 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 TMEM132DQ14C87 1099 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 PSMD6Q15008 389 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 CLLU1OSQ5K130 101 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 C9orf50Q5SZB4 431 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 FRMD5Q7Z6J6 570 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 WDR49Q8IV35 697 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 TMEM192Q8IY95 271 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 CMTR2Q8IYT2 770 aaKnown RBP11.94□□□□□ -0.5
CHD4-202ENST00000430771 TDHQ8IZJ6 230 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 RDH13Q8NBN7 331 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 ZSWIM2Q8NEG5 633 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 FAM212AQ96EL1 285 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 MFSD14AQ96MC6 490 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 YME1L1Q96TA2 773 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 GAD1Q99259 594 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 CGRRF1Q99675 332 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 ZBED2Q9BTP6 218 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 RNF39Q9H2S5 420 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 KANSL3Q9P2N6 904 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 ARMCX3Q9UH62 379 aaPredicted RBP11.94□□□□□ -0.5
CHD4-202ENST00000430771 UBQLN1Q9UMX0 589 aaKnown RBP11.94□□□□□ -0.5
CHD4-202ENST00000430771 C2CD2Q9Y426 696 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 TRIP11Q15643 1979 aa11.94□□□□□ -0.5
CHD4-202ENST00000430771 CARNS1A5YM72 827 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 TBKBP1A7MCY6 615 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 RBAK-RBAKDNI3L0D1 243 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 OFD1O75665 1012 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 DGKIO75912 1065 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 TPM2P07951 284 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 TMEM191BP0C7N4 346 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 DLATP10515 647 aaKnown RBP11.93□□□□□ -0.5
CHD4-202ENST00000430771 KCNE1P15382 129 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 EEF1GP26641 437 aaKnown RBP11.93□□□□□ -0.5
CHD4-202ENST00000430771 SCNN1GP51170 649 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 VAMP7P51809 220 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 AP3M2P53677 418 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 SHHQ15465 462 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 SLC10A6Q3KNW5 377 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 XKR4Q5GH76 650 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 DCAF17Q5H9S7 520 aaPredicted RBP11.93□□□□□ -0.5
CHD4-202ENST00000430771 NOMO2Q5JPE7 1267 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 GLRA4Q5JXX5 417 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 TCERG1LQ5VWI1 586 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 FAM117BQ6P1L5 589 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 HERC6Q8IVU3 1022 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 DHX40Q8IX18 779 aaKnown RBP11.93□□□□□ -0.5
CHD4-202ENST00000430771 CRIPAKQ8N1N5 446 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 TMC2Q8TDI7 906 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 KIF12Q96FN5 646 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 EEF2KMTQ96G04 330 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 ANKRD36BP1Q96IX9 119 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 ZFP42Q96MM3 310 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 MED15Q96RN5 788 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 RC3H2Q9HBD1 1191 aaKnown RBP11.93□□□□□ -0.5
CHD4-202ENST00000430771 CBX8Q9HC52 389 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 RNF19AQ9NV58 838 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 KLK14Q9P0G3 267 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 GBF1Q92538 1859 aa11.93□□□□□ -0.5
CHD4-202ENST00000430771 KIAA1671Q9BY89 1806 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms