RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 GLYCTKQ8IVS8 523 aa13.74□□□□□ -0.21
SMPD4-204ENST00000430682 C3orf58Q8NDZ4 430 aa13.74□□□□□ -0.21
SMPD4-204ENST00000430682 RAD54LQ92698 747 aa13.74□□□□□ -0.21
SMPD4-204ENST00000430682 FIZ1Q96SL8 496 aa13.74□□□□□ -0.21
SMPD4-204ENST00000430682 POP1Q99575 1024 aaKnown RBP13.74□□□□□ -0.21
SMPD4-204ENST00000430682 TIPINQ9BVW5 301 aa13.74□□□□□ -0.21
SMPD4-204ENST00000430682 MRPL4Q9BYD3 311 aaKnown RBP13.74□□□□□ -0.21
SMPD4-204ENST00000430682 C17orf75Q9HAS0 396 aa13.74□□□□□ -0.21
SMPD4-204ENST00000430682 RBM19Q9Y4C8 960 aaKnown RBP13.74□□□□□ -0.21
SMPD4-204ENST00000430682 WDR87Q6ZQQ6 2873 aa13.74□□□□□ -0.21
SMPD4-204ENST00000430682 TCHHQ07283 1943 aa13.73□□□□□ -0.21
SMPD4-204ENST00000430682 A0A087X0B3 334 aa13.73□□□□□ -0.21
SMPD4-204ENST00000430682 SMIM28A0A1B0GU29 152 aa13.73□□□□□ -0.21
SMPD4-204ENST00000430682 C2CD4DB7Z1M9 353 aa13.73□□□□□ -0.21
SMPD4-204ENST00000430682 ADAM12O43184 909 aa13.73□□□□□ -0.21
SMPD4-204ENST00000430682 BRD1O95696 1058 aa13.73□□□□□ -0.21
SMPD4-204ENST00000430682 ALADP13716 330 aa13.73□□□□□ -0.21
SMPD4-204ENST00000430682 PDCP20941 246 aa13.73□□□□□ -0.21
SMPD4-204ENST00000430682 CLCNKBP51801 687 aa13.73□□□□□ -0.21
SMPD4-204ENST00000430682 NCKAP1LP55160 1127 aa13.73□□□□□ -0.21
SMPD4-204ENST00000430682 ITIH3Q06033 890 aa13.73□□□□□ -0.21
SMPD4-204ENST00000430682 BMS1Q14692 1282 aaKnown RBP13.73□□□□□ -0.21
SMPD4-204ENST00000430682 USP41Q3LFD5 358 aa13.73□□□□□ -0.21
SMPD4-204ENST00000430682 ZNF568Q3ZCX4 644 aa13.73□□□□□ -0.21
SMPD4-204ENST00000430682 TPRNQ4KMQ1 711 aa13.73□□□□□ -0.21
SMPD4-204ENST00000430682 PALB2Q86YC2 1186 aa13.73□□□□□ -0.21
SMPD4-204ENST00000430682 KCTD17Q8N5Z5 321 aa13.73□□□□□ -0.21
SMPD4-204ENST00000430682 RIN2Q8WYP3 895 aaPredicted RBP13.73□□□□□ -0.21
SMPD4-204ENST00000430682 SNX21Q969T3 373 aa13.73□□□□□ -0.21
SMPD4-204ENST00000430682 CALML4Q96GE6 196 aa13.73□□□□□ -0.21
SMPD4-204ENST00000430682 EMILIN2Q9BXX0 1053 aa13.73□□□□□ -0.21
SMPD4-204ENST00000430682 CCSER1Q9C0I3 900 aa13.73□□□□□ -0.21
SMPD4-204ENST00000430682 IKZF4Q9H2S9 585 aa13.73□□□□□ -0.21
SMPD4-204ENST00000430682 SCN1AP35498 2009 aa13.73□□□□□ -0.21
SMPD4-204ENST00000430682 KMT2EQ8IZD2 1858 aa13.72□□□□□ -0.21
SMPD4-204ENST00000430682 I3L4J1 428 aa13.72□□□□□ -0.21
SMPD4-204ENST00000430682 SLC26A4O43511 780 aa13.72□□□□□ -0.21
SMPD4-204ENST00000430682 STX6O43752 255 aa13.72□□□□□ -0.21
SMPD4-204ENST00000430682 TADA2AO75478 443 aa13.72□□□□□ -0.21
SMPD4-204ENST00000430682 RFPL2O75678 378 aa13.72□□□□□ -0.21
SMPD4-204ENST00000430682 BMP15O95972 392 aa13.72□□□□□ -0.21
SMPD4-204ENST00000430682 MCF2P10911 925 aa13.72□□□□□ -0.21
SMPD4-204ENST00000430682 HARSP12081 509 aaKnown RBP13.72□□□□□ -0.21
SMPD4-204ENST00000430682 ZNF131P52739 623 aa13.72□□□□□ -0.21
SMPD4-204ENST00000430682 SLC10A6Q3KNW5 377 aa13.72□□□□□ -0.21
SMPD4-204ENST00000430682 FAM171A1Q5VUB5 890 aa13.72□□□□□ -0.21
SMPD4-204ENST00000430682 KIAA1841Q6NSI8 718 aa13.72□□□□□ -0.21
SMPD4-204ENST00000430682 LILRA6Q6PI73 481 aa13.72□□□□□ -0.21
SMPD4-204ENST00000430682 MPZL3Q6UWV2 235 aa13.72□□□□□ -0.21
SMPD4-204ENST00000430682 RSPO2Q6UXX9 243 aaPredicted RBP13.72□□□□□ -0.21
SMPD4-204ENST00000430682 HAUS6Q7Z4H7 955 aa13.72□□□□□ -0.21
SMPD4-204ENST00000430682 GPR149Q86SP6 731 aa13.72□□□□□ -0.21
SMPD4-204ENST00000430682 PPFIBP1Q86W92 1011 aa13.72□□□□□ -0.21
SMPD4-204ENST00000430682 TMEM87AQ8NBN3 555 aa13.72□□□□□ -0.21
SMPD4-204ENST00000430682 LNX1Q8TBB1 728 aaPredicted RBP13.72□□□□□ -0.21
SMPD4-204ENST00000430682 C18orf25Q96B23 403 aaPredicted RBP13.72□□□□□ -0.21
SMPD4-204ENST00000430682 ZNF707Q96C28 371 aaPredicted RBP13.72□□□□□ -0.21
SMPD4-204ENST00000430682 SNX27Q96L92 541 aa13.72□□□□□ -0.21
SMPD4-204ENST00000430682 SMOC2Q9H3U7 446 aa13.72□□□□□ -0.21
SMPD4-204ENST00000430682 MAN1C1Q9NR34 630 aa13.72□□□□□ -0.21
SMPD4-204ENST00000430682 DZANK1Q9NVP4 752 aa13.72□□□□□ -0.21
SMPD4-204ENST00000430682 SRPRBQ9Y5M8 271 aaKnown RBP13.72□□□□□ -0.21
SMPD4-204ENST00000430682 TGM5O43548 720 aa13.71□□□□□ -0.21
SMPD4-204ENST00000430682 NR1I2O75469 434 aa13.71□□□□□ -0.21
SMPD4-204ENST00000430682 NMT1P30419 496 aaKnown RBP13.71□□□□□ -0.21
SMPD4-204ENST00000430682 BRCC3P46736 316 aa13.71□□□□□ -0.21
SMPD4-204ENST00000430682 UPP1Q16831 310 aa13.71□□□□□ -0.21
SMPD4-204ENST00000430682 ZBTB41Q5SVQ8 909 aa13.71□□□□□ -0.21
SMPD4-204ENST00000430682 CES5AQ6NT32 575 aa13.71□□□□□ -0.21
SMPD4-204ENST00000430682 SLC39A4Q6P5W5 647 aa13.71□□□□□ -0.21
SMPD4-204ENST00000430682 LARP4BQ92615 738 aaKnown RBP13.71□□□□□ -0.21
SMPD4-204ENST00000430682 CLSTN3Q9BQT9 956 aa13.71□□□□□ -0.21
SMPD4-204ENST00000430682 TCHPQ9BT92 498 aa13.71□□□□□ -0.21
SMPD4-204ENST00000430682 TSHZ2Q9NRE2 1034 aa13.71□□□□□ -0.21
SMPD4-204ENST00000430682 KCND2Q9NZV8 630 aa13.71□□□□□ -0.21
SMPD4-204ENST00000430682 FNIP2Q9P278 1114 aa13.71□□□□□ -0.21
SMPD4-204ENST00000430682 ANKFY1Q9P2R3 1169 aa13.71□□□□□ -0.21
SMPD4-204ENST00000430682 STK39Q9UEW8 545 aa13.71□□□□□ -0.21
SMPD4-204ENST00000430682 ODF2LQ9ULJ1 636 aa13.71□□□□□ -0.21
SMPD4-204ENST00000430682 VPS13AQ96RL7 3174 aa13.71□□□□□ -0.22
SMPD4-204ENST00000430682 PRR33A8MZF0 331 aa13.7□□□□□ -0.22
SMPD4-204ENST00000430682 TISP43B9A030 160 aa13.7□□□□□ -0.22
SMPD4-204ENST00000430682 FAM189A1O60320 539 aa13.7□□□□□ -0.22
SMPD4-204ENST00000430682 N4BP1O75113 896 aaKnown RBP13.7□□□□□ -0.22
SMPD4-204ENST00000430682 TOM1L1O75674 476 aa13.7□□□□□ -0.22
SMPD4-204ENST00000430682 ADH1AP07327 375 aa13.7□□□□□ -0.22
SMPD4-204ENST00000430682 KCNE1P15382 129 aa13.7□□□□□ -0.22
SMPD4-204ENST00000430682 DDIT3P35638 169 aa13.7□□□□□ -0.22
SMPD4-204ENST00000430682 TNFSF9P41273 254 aa13.7□□□□□ -0.22
SMPD4-204ENST00000430682 MTHFRP42898 656 aa13.7□□□□□ -0.22
SMPD4-204ENST00000430682 ZXDAP98168 799 aa13.7□□□□□ -0.22
SMPD4-204ENST00000430682 SPAG1Q07617 926 aa13.7□□□□□ -0.22
SMPD4-204ENST00000430682 SLC39A14Q15043 492 aa13.7□□□□□ -0.22
SMPD4-204ENST00000430682 ZC2HC1CQ53FD0 456 aaPredicted RBP13.7□□□□□ -0.22
SMPD4-204ENST00000430682 FOXD4L5Q5VV16 416 aaPredicted RBP13.7□□□□□ -0.22
SMPD4-204ENST00000430682 HFE2Q6ZVN8 426 aa13.7□□□□□ -0.22
SMPD4-204ENST00000430682 CEP57Q86XR8 500 aa13.7□□□□□ -0.22
SMPD4-204ENST00000430682 MYCT1Q8N699 235 aa13.7□□□□□ -0.22
SMPD4-204ENST00000430682 FOXD4L4Q8WXT5 416 aaPredicted RBP13.7□□□□□ -0.22
SMPD4-204ENST00000430682 PIK3R5Q8WYR1 880 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms