RNA–Protein interactions for RNA: ENST00000430142.5

TOP3B-204, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-204ENST00000430142 IGFBP6P24592 240 aaPredicted RBP16.6■□□□□ 0.25
TOP3B-204ENST00000430142 GPC5P78333 572 aa16.6■□□□□ 0.25
TOP3B-204ENST00000430142 FOXK2Q01167 660 aa16.6■□□□□ 0.25
TOP3B-204ENST00000430142 MAPK6Q16659 721 aa16.6■□□□□ 0.25
TOP3B-204ENST00000430142 PPM1LQ5SGD2 360 aa16.6■□□□□ 0.25
TOP3B-204ENST00000430142 LIN9Q5TKA1 542 aa16.6■□□□□ 0.25
TOP3B-204ENST00000430142 EEF1DP3Q658K8 133 aa16.6■□□□□ 0.25
TOP3B-204ENST00000430142 PADI6Q6TGC4 694 aa16.6■□□□□ 0.25
TOP3B-204ENST00000430142 POLR3CQ9BUI4 534 aaPredicted RBP16.6■□□□□ 0.25
TOP3B-204ENST00000430142 CCDC113Q9H0I3 377 aa16.6■□□□□ 0.25
TOP3B-204ENST00000430142 C2orf40Q9H1Z8 148 aa16.6■□□□□ 0.25
TOP3B-204ENST00000430142 POLD4Q9HCU8 107 aa16.6■□□□□ 0.25
TOP3B-204ENST00000430142 DLGAP2Q9P1A6 1054 aa16.6■□□□□ 0.25
TOP3B-204ENST00000430142 CDH7Q9ULB5 785 aa16.6■□□□□ 0.25
TOP3B-204ENST00000430142 ZFP37Q9Y6Q3 630 aaPredicted RBP16.6■□□□□ 0.25
TOP3B-204ENST00000430142 ACKR2O00590 384 aa16.59■□□□□ 0.25
TOP3B-204ENST00000430142 CCL16O15467 120 aa16.59■□□□□ 0.25
TOP3B-204ENST00000430142 PRKCBP05771 671 aa16.59■□□□□ 0.25
TOP3B-204ENST00000430142 HNRNPA1P09651 372 aaKnown RBP eCLIP16.59■□□□□ 0.25
TOP3B-204ENST00000430142 CYP11B2P19099 503 aa16.59■□□□□ 0.25
TOP3B-204ENST00000430142 ID4P47928 161 aa16.59■□□□□ 0.25
TOP3B-204ENST00000430142 NEK4P51957 841 aa16.59■□□□□ 0.25
TOP3B-204ENST00000430142 GUCY1B3Q02153 619 aa16.59■□□□□ 0.25
TOP3B-204ENST00000430142 ADPGKQ9BRR6 497 aa16.59■□□□□ 0.25
TOP3B-204ENST00000430142 FOXQ1Q9C009 403 aa16.59■□□□□ 0.25
TOP3B-204ENST00000430142 POLIQ9UNA4 740 aa16.59■□□□□ 0.25
TOP3B-204ENST00000430142 GDAQ9Y2T3 454 aa16.59■□□□□ 0.25
TOP3B-204ENST00000430142 ARHGEF35A5YM69 484 aa16.58■□□□□ 0.24
TOP3B-204ENST00000430142 LMNAP02545 664 aaKnown RBP16.58■□□□□ 0.24
TOP3B-204ENST00000430142 GLULP15104 373 aa16.58■□□□□ 0.24
TOP3B-204ENST00000430142 RPA1P27694 616 aa16.58■□□□□ 0.24
TOP3B-204ENST00000430142 OR1D2P34982 312 aa16.58■□□□□ 0.24
TOP3B-204ENST00000430142 NAMPTP43490 491 aa16.58■□□□□ 0.24
TOP3B-204ENST00000430142 ELAVL2Q12926 359 aaKnown RBP16.58■□□□□ 0.24
TOP3B-204ENST00000430142 ZNF174Q15697 407 aa16.58■□□□□ 0.24
TOP3B-204ENST00000430142 DEPTORQ8TB45 409 aa16.58■□□□□ 0.24
TOP3B-204ENST00000430142 ITFG1Q8TB96 612 aa16.58■□□□□ 0.24
TOP3B-204ENST00000430142 SLC7A14Q8TBB6 771 aa16.58■□□□□ 0.24
TOP3B-204ENST00000430142 FGF13Q92913 245 aa16.58■□□□□ 0.24
TOP3B-204ENST00000430142 KIFC3Q9BVG8 833 aa16.58■□□□□ 0.24
TOP3B-204ENST00000430142 SEMA4AQ9H3S1 761 aa16.58■□□□□ 0.24
TOP3B-204ENST00000430142 GVINP1Q7Z2Y8 2422 aa16.58■□□□□ 0.24
TOP3B-204ENST00000430142 DOCK6Q96HP0 2047 aa16.57■□□□□ 0.24
TOP3B-204ENST00000430142 XYLBO75191 536 aa16.57■□□□□ 0.24
TOP3B-204ENST00000430142 LRRN2O75325 713 aa16.57■□□□□ 0.24
TOP3B-204ENST00000430142 SP9P0CG40 484 aa16.57■□□□□ 0.24
TOP3B-204ENST00000430142 HOXA9P31269 272 aa16.57■□□□□ 0.24
TOP3B-204ENST00000430142 STARD6P59095 220 aa16.57■□□□□ 0.24
TOP3B-204ENST00000430142 SNW1Q13573 536 aaKnown RBP16.57■□□□□ 0.24
TOP3B-204ENST00000430142 RAB33AQ14088 237 aa16.57■□□□□ 0.24
TOP3B-204ENST00000430142 C8orf34Q49A92 452 aa16.57■□□□□ 0.24
TOP3B-204ENST00000430142 GLRA4Q5JXX5 417 aa16.57■□□□□ 0.24
TOP3B-204ENST00000430142 AXDND1Q5T1B0 1012 aaPredicted RBP16.57■□□□□ 0.24
TOP3B-204ENST00000430142 PDXDC1Q6P996 788 aa16.57■□□□□ 0.24
TOP3B-204ENST00000430142 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.57■□□□□ 0.24
TOP3B-204ENST00000430142 C1orf210Q8IVY1 113 aa16.57■□□□□ 0.24
TOP3B-204ENST00000430142 PJA1Q8NG27 643 aa16.57■□□□□ 0.24
TOP3B-204ENST00000430142 ERMNQ8TAM6 284 aa16.57■□□□□ 0.24
TOP3B-204ENST00000430142 KIF2CQ99661 725 aa16.57■□□□□ 0.24
TOP3B-204ENST00000430142 HCFC1R1Q9NWW0 138 aa16.57■□□□□ 0.24
TOP3B-204ENST00000430142 EIF5BO60841 1220 aaKnown RBP16.56■□□□□ 0.24
TOP3B-204ENST00000430142 B3GAT3O94766 335 aa16.56■□□□□ 0.24
TOP3B-204ENST00000430142 OR52Z1P0C646 297 aa16.56■□□□□ 0.24
TOP3B-204ENST00000430142 FGFR3P22607 806 aa16.56■□□□□ 0.24
TOP3B-204ENST00000430142 CLCNKBP51801 687 aa16.56■□□□□ 0.24
TOP3B-204ENST00000430142 SAFBQ15424 915 aaKnown RBP eCLIP16.56■□□□□ 0.24
TOP3B-204ENST00000430142 ECM1Q16610 540 aa16.56■□□□□ 0.24
TOP3B-204ENST00000430142 UVSSAQ2YD98 709 aa16.56■□□□□ 0.24
TOP3B-204ENST00000430142 NT5DC1Q5TFE4 455 aa16.56■□□□□ 0.24
TOP3B-204ENST00000430142 CD300LGQ6UXG3 332 aa16.56■□□□□ 0.24
TOP3B-204ENST00000430142 RSPO2Q6UXX9 243 aaPredicted RBP16.56■□□□□ 0.24
TOP3B-204ENST00000430142 MTSS1LQ765P7 747 aa16.56■□□□□ 0.24
TOP3B-204ENST00000430142 SHDQ96IW2 340 aa16.56■□□□□ 0.24
TOP3B-204ENST00000430142 PPP1R10Q96QC0 940 aaKnown RBP16.56■□□□□ 0.24
TOP3B-204ENST00000430142 DNMT3BQ9UBC3 853 aaKnown RBP16.56■□□□□ 0.24
TOP3B-204ENST00000430142 MTRRQ9UBK8 725 aa16.56■□□□□ 0.24
TOP3B-204ENST00000430142 WDR87Q6ZQQ6 2873 aa16.55■□□□□ 0.24
TOP3B-204ENST00000430142 TMEM189-UBE2V1I3L0A0 370 aa16.55■□□□□ 0.24
TOP3B-204ENST00000430142 RBM25P49756 843 aaKnown RBP16.55■□□□□ 0.24
TOP3B-204ENST00000430142 PPP2R5AQ15172 486 aa16.55■□□□□ 0.24
TOP3B-204ENST00000430142 DCAF4L1Q3SXM0 396 aa16.55■□□□□ 0.24
TOP3B-204ENST00000430142 SLC44A4Q53GD3 710 aa16.55■□□□□ 0.24
TOP3B-204ENST00000430142 ATF7IP2Q5U623 682 aa16.55■□□□□ 0.24
TOP3B-204ENST00000430142 ERMP1Q7Z2K6 904 aa16.55■□□□□ 0.24
TOP3B-204ENST00000430142 IFT74Q96LB3 600 aa16.55■□□□□ 0.24
TOP3B-204ENST00000430142 KXD1Q9BQD3 176 aa16.55■□□□□ 0.24
TOP3B-204ENST00000430142 GOLGA2P5Q9HBQ8 144 aa16.55■□□□□ 0.24
TOP3B-204ENST00000430142 CDY1Q9Y6F8 540 aa16.55■□□□□ 0.24
TOP3B-204ENST00000430142 KANSL1LA0AUZ9 987 aa16.54■□□□□ 0.24
TOP3B-204ENST00000430142 I3L4J1 428 aa16.54■□□□□ 0.24
TOP3B-204ENST00000430142 POU2F2P09086 479 aa16.54■□□□□ 0.24
TOP3B-204ENST00000430142 TKTP29401 623 aaKnown RBP16.54■□□□□ 0.24
TOP3B-204ENST00000430142 CCT6AP40227 531 aaKnown RBP16.54■□□□□ 0.24
TOP3B-204ENST00000430142 EFNA5P52803 228 aa16.54■□□□□ 0.24
TOP3B-204ENST00000430142 MLF2Q15773 248 aaPredicted RBP16.54■□□□□ 0.24
TOP3B-204ENST00000430142 UPP1Q16831 310 aa16.54■□□□□ 0.24
TOP3B-204ENST00000430142 PABPC1LQ4VXU2 614 aaKnown RBP16.54■□□□□ 0.24
TOP3B-204ENST00000430142 MAML2Q8IZL2 1156 aaPredicted RBP16.54■□□□□ 0.24
TOP3B-204ENST00000430142 ING5Q8WYH8 240 aa16.54■□□□□ 0.24
TOP3B-204ENST00000430142 BHMT2Q9H2M3 363 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms