RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 SYNPO2Q9UMS6 1093 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 LIMCH1Q9UPQ0 1083 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 SIT1Q9Y3P8 196 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 BCL9O00512 1426 aa4.97□□□□□ -1.61
HMGB3-203ENST00000430118 AKAP12Q02952 1782 aa4.96□□□□□ -1.61
HMGB3-203ENST00000430118 BRD4O60885 1362 aaPredicted RBP4.96□□□□□ -1.62
HMGB3-203ENST00000430118 F8W031 263 aaPredicted RBP4.96□□□□□ -1.62
HMGB3-203ENST00000430118 HRKO00198 91 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 SH3BP5O60239 455 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 TGFB1P01137 390 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 LRG1P02750 347 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 ALDH2P05091 517 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 RGS3P49796 1198 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 PRELPP51888 382 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 CDK17Q00537 523 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 CHAF1AQ13111 956 aaPredicted RBP4.96□□□□□ -1.62
HMGB3-203ENST00000430118 STK3Q13188 491 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 CNN3Q15417 329 aaKnown RBP4.96□□□□□ -1.62
HMGB3-203ENST00000430118 TXNRD1Q16881 649 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 VASNQ6EMK4 673 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 C1orf228Q6PIY5 440 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 TEPPQ6URK8 271 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 UNQ6494/PRO21346Q6UXR6 183 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 ETV3LQ6ZN32 361 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 MAEAQ7L5Y9 396 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 ZC3H18Q86VM9 953 aaKnown RBP4.96□□□□□ -1.62
HMGB3-203ENST00000430118 MYLK4Q86YV6 388 aaPredicted RBP4.96□□□□□ -1.62
HMGB3-203ENST00000430118 AGBL5Q8NDL9 886 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 EVI5LQ96CN4 794 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 MTFMTQ96DP5 389 aaKnown RBP4.96□□□□□ -1.62
HMGB3-203ENST00000430118 CGRRF1Q99675 332 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 NAP1L4Q99733 375 aaKnown RBP4.96□□□□□ -1.62
HMGB3-203ENST00000430118 LRFN3Q9BTN0 628 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 AMNQ9BXJ7 453 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 OR10A5Q9H207 317 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 BHMT2Q9H2M3 363 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 EPB41L4AQ9HCS5 686 aaPredicted RBP4.96□□□□□ -1.62
HMGB3-203ENST00000430118 RBM12Q9NTZ6 932 aaKnown RBP4.96□□□□□ -1.62
HMGB3-203ENST00000430118 TRMT13Q9NUP7 481 aaKnown RBP4.96□□□□□ -1.62
HMGB3-203ENST00000430118 GNL3LQ9NVN8 582 aaKnown RBP4.96□□□□□ -1.62
HMGB3-203ENST00000430118 C19orf73Q9NVV2 129 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 UCKL1Q9NWZ5 548 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 ANAPC4Q9UJX5 808 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 POLHQ9Y253 713 aa4.96□□□□□ -1.62
HMGB3-203ENST00000430118 RGPD8O14715 1765 aaPredicted RBP4.96□□□□□ -1.62
HMGB3-203ENST00000430118 COL5A2P05997 1499 aaPredicted RBP4.95□□□□□ -1.62
HMGB3-203ENST00000430118 PEAK1Q9H792 1746 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 CPDO75976 1380 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 ZC3H12DA2A288 527 aaKnown RBP4.95□□□□□ -1.62
HMGB3-203ENST00000430118 TBX3O15119 743 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 PHF2O75151 1096 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 ENDOD1O94919 500 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 PCDH8O95206 1070 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 EFEMP2O95967 443 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 HMGB2P26583 209 aaKnown RBP4.95□□□□□ -1.62
HMGB3-203ENST00000430118 MC4RP32245 332 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 FXR1P51114 621 aaKnown RBP eCLIP4.95□□□□□ -1.62
HMGB3-203ENST00000430118 NKX3-2P78367 333 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 KIR3DS1Q14943 382 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 LLGL1Q15334 1064 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 MAN2A1Q16706 1144 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 ZMYM1Q5SVZ6 1142 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 OLFML2BQ68BL8 750 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 XRRA1Q6P2D8 792 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 DPP8Q6V1X1 898 aaPredicted RBP4.95□□□□□ -1.62
HMGB3-203ENST00000430118 SPRED2Q7Z698 418 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 DTX1Q86Y01 620 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 SMAP1Q8IYB5 467 aaPredicted RBP4.95□□□□□ -1.62
HMGB3-203ENST00000430118 PPM1NQ8N819 430 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 GLB1L3Q8NCI6 653 aaPredicted RBP4.95□□□□□ -1.62
HMGB3-203ENST00000430118 MYRIPQ8NFW9 859 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 PPP1R14CQ8TAE6 165 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 WDR48Q8TAF3 677 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 KLHDC4Q8TBB5 520 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 NSUN6Q8TEA1 469 aaKnown RBP4.95□□□□□ -1.62
HMGB3-203ENST00000430118 NRG4Q8WWG1 115 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 CPA5Q8WXQ8 436 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 MYLIPQ8WY64 445 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 RGMAQ96B86 450 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 PRAM1Q96QH2 718 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 WRNIP1Q96S55 665 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 TMEM209Q96SK2 561 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 NOL10Q9BSC4 688 aaKnown RBP4.95□□□□□ -1.62
HMGB3-203ENST00000430118 OSBPL6Q9BZF3 934 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 LRRC27Q9C0I9 530 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 PRDM12Q9H4Q4 367 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 RSAD1Q9HA92 442 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 PPCSQ9HAB8 311 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 ARFGAP3Q9NP61 516 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 DCP1AQ9NPI6 582 aaPredicted RBP4.95□□□□□ -1.62
HMGB3-203ENST00000430118 CASS4Q9NQ75 786 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 DLL4Q9NR61 685 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 ZNF69Q9UC07 566 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 CCDC39Q9UFE4 941 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 EVLQ9UI08 416 aaPredicted RBP4.95□□□□□ -1.62
HMGB3-203ENST00000430118 FBXO10Q9UK96 956 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 YBX2Q9Y2T7 364 aaKnown RBP4.95□□□□□ -1.62
HMGB3-203ENST00000430118 LMO7Q8WWI1 1683 aa4.95□□□□□ -1.62
HMGB3-203ENST00000430118 KIAA1324LA8MWY0 1029 aaPredicted RBP4.94□□□□□ -1.62
HMGB3-203ENST00000430118 CELA3BP08861 270 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms