RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 SCLT1Q96NL6 688 aa15.43■□□□□ 0.06
CALD1-207ENST00000430085 PPP1R16BQ96T49 567 aa15.43■□□□□ 0.06
CALD1-207ENST00000430085 PACSIN1Q9BY11 444 aa15.43■□□□□ 0.06
CALD1-207ENST00000430085 ARHGAP39Q9C0H5 1083 aa15.43■□□□□ 0.06
CALD1-207ENST00000430085 IFT122Q9HBG6 1241 aa15.43■□□□□ 0.06
CALD1-207ENST00000430085 SEPT11Q9NVA2 429 aaKnown RBP15.43■□□□□ 0.06
CALD1-207ENST00000430085 GJD2Q9UKL4 321 aa15.43■□□□□ 0.06
CALD1-207ENST00000430085 JRKLQ9Y4A0 524 aa15.43■□□□□ 0.06
CALD1-207ENST00000430085 ATP8B3O60423 1300 aa15.42■□□□□ 0.06
CALD1-207ENST00000430085 CNTNAP2Q9UHC6 1331 aa15.42■□□□□ 0.06
CALD1-207ENST00000430085 A0A087WZ62 844 aa15.42■□□□□ 0.06
CALD1-207ENST00000430085 RRN3P2A6NIE6 340 aa15.42■□□□□ 0.06
CALD1-207ENST00000430085 EFCAB8A8MWE9 144 aa15.42■□□□□ 0.06
CALD1-207ENST00000430085 B4GALT5O43286 388 aa15.42■□□□□ 0.06
CALD1-207ENST00000430085 BUB1O43683 1085 aa15.42■□□□□ 0.06
CALD1-207ENST00000430085 HLA-DRAP01903 254 aa15.42■□□□□ 0.06
CALD1-207ENST00000430085 C4BPAP04003 597 aaKnown RBP15.42■□□□□ 0.06
CALD1-207ENST00000430085 CTGFP29279 349 aa15.42■□□□□ 0.06
CALD1-207ENST00000430085 TNFSF9P41273 254 aa15.42■□□□□ 0.06
CALD1-207ENST00000430085 CPT1AP50416 773 aa15.42■□□□□ 0.06
CALD1-207ENST00000430085 LACTBP83111 547 aaPredicted RBP15.42■□□□□ 0.06
CALD1-207ENST00000430085 NAA30Q147X3 362 aaPredicted RBP15.42■□□□□ 0.06
CALD1-207ENST00000430085 WHAMMP3Q1A5X7 153 aa15.42■□□□□ 0.06
CALD1-207ENST00000430085 TDRD10Q5VZ19 366 aaKnown RBP15.42■□□□□ 0.06
CALD1-207ENST00000430085 CEP112Q8N8E3 955 aa15.42■□□□□ 0.06
CALD1-207ENST00000430085 LNX1Q8TBB1 728 aaPredicted RBP15.42■□□□□ 0.06
CALD1-207ENST00000430085 NLRP7Q8WX94 980 aa15.42■□□□□ 0.06
CALD1-207ENST00000430085 SHC3Q92529 594 aa15.42■□□□□ 0.06
CALD1-207ENST00000430085 KREMEN1Q96MU8 473 aa15.42■□□□□ 0.06
CALD1-207ENST00000430085 AGPAT1Q99943 283 aa15.42■□□□□ 0.06
CALD1-207ENST00000430085 FDXACB1Q9BRP7 624 aaPredicted RBP15.42■□□□□ 0.06
CALD1-207ENST00000430085 PI4K2AQ9BTU6 479 aa15.42■□□□□ 0.06
CALD1-207ENST00000430085 AP5M1Q9H0R1 490 aa15.42■□□□□ 0.06
CALD1-207ENST00000430085 MINDY3Q9H8M7 445 aa15.42■□□□□ 0.06
CALD1-207ENST00000430085 SALL4Q9UJQ4 1053 aa15.42■□□□□ 0.06
CALD1-207ENST00000430085 SAR1BQ9Y6B6 198 aa15.42■□□□□ 0.06
CALD1-207ENST00000430085 BTNL10A8MVZ5 291 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 FAM189A1O60320 539 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 FKTNO75072 461 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 PHACTR2O75167 634 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 CLSTN1O94985 981 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 H2AFZP0C0S5 128 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 PROZP22891 400 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 AP3M2P53677 418 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 AMPD2Q01433 879 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 GCNT1Q02742 428 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 SURF1Q15526 300 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 MARCH8Q5T0T0 291 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 PAPD7Q5XG87 772 aaKnown RBP15.41■□□□□ 0.06
CALD1-207ENST00000430085 H2AFVQ71UI9 128 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 TRAPPC11Q7Z392 1133 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 IFNLR1Q8IU57 520 aaPredicted RBP15.41■□□□□ 0.06
CALD1-207ENST00000430085 FAM71AQ8IYT1 594 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 SLC30A5Q8TAD4 765 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 CD99L2Q8TCZ2 262 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 UBXN4Q92575 508 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 LENG1Q96BZ8 264 aaPredicted RBP15.41■□□□□ 0.06
CALD1-207ENST00000430085 FAM212AQ96EL1 285 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 FAM84AQ96KN4 292 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 INTUQ9ULD6 942 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 NENFQ9UMX5 172 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 TNFSF13BQ9Y275 285 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 PTPRJQ12913 1337 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 ABLIM1O14639 778 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 F2P00734 622 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 LBX1P52954 281 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 FCGRTP55899 365 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 IFI16Q16666 785 aaKnown RBP15.41■□□□□ 0.06
CALD1-207ENST00000430085 FAM187BQ17R55 369 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 WDR49Q8IV35 697 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 THNSL1Q8IYQ7 743 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 TATDN2Q93075 761 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 SYT11Q9BT88 431 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 PTPRHQ9HD43 1115 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 SETD4Q9NVD3 440 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 HDAC6Q9UBN7 1215 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 CPSF3Q9UKF6 684 aaKnown RBP15.41■□□□□ 0.06
CALD1-207ENST00000430085 Q9Y3F1 56 aa15.41■□□□□ 0.06
CALD1-207ENST00000430085 TADA3O75528 432 aa15.4■□□□□ 0.06
CALD1-207ENST00000430085 IQCF3P0C7M6 154 aa15.4■□□□□ 0.06
CALD1-207ENST00000430085 SMIM10L2AP0DMW4 78 aa15.4■□□□□ 0.06
CALD1-207ENST00000430085 SMIM10L2BP0DMW5 78 aa15.4■□□□□ 0.06
CALD1-207ENST00000430085 CTCFP49711 727 aaPredicted RBP15.4■□□□□ 0.06
CALD1-207ENST00000430085 ELF2Q15723 593 aa15.4■□□□□ 0.06
CALD1-207ENST00000430085 ERCC6LQ2NKX8 1250 aa15.4■□□□□ 0.06
CALD1-207ENST00000430085 NFRKBQ6P4R8 1299 aa15.4■□□□□ 0.06
CALD1-207ENST00000430085 SRGAP1Q7Z6B7 1085 aa15.4■□□□□ 0.06
CALD1-207ENST00000430085 LMBR1Q8WVP7 490 aa15.4■□□□□ 0.06
CALD1-207ENST00000430085 NRCAMQ92823 1304 aa15.4■□□□□ 0.06
CALD1-207ENST00000430085 TMCO5BA8MYB1 307 aa15.39■□□□□ 0.05
CALD1-207ENST00000430085 CYP26A1O43174 497 aa15.39■□□□□ 0.05
CALD1-207ENST00000430085 KRT5P13647 590 aa15.39■□□□□ 0.05
CALD1-207ENST00000430085 PSMC4P43686 418 aa15.39■□□□□ 0.05
CALD1-207ENST00000430085 NOP2P46087 812 aaKnown RBP15.39■□□□□ 0.05
CALD1-207ENST00000430085 MFSD10Q14728 455 aa15.39■□□□□ 0.05
CALD1-207ENST00000430085 EEF1DP3Q658K8 133 aa15.39■□□□□ 0.05
CALD1-207ENST00000430085 ZNF410Q86VK4 478 aa15.39■□□□□ 0.05
CALD1-207ENST00000430085 CDR2LQ86X02 465 aaPredicted RBP15.39■□□□□ 0.05
CALD1-207ENST00000430085 KIAA0319LQ8IZA0 1049 aa15.39■□□□□ 0.05
CALD1-207ENST00000430085 OR5B17Q8NGF7 314 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms