RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 K7ERI5 159 aa18.81■□□□□ 0.6
CPSF4-203ENST00000430038 MRE11P49959 708 aa18.81■□□□□ 0.6
CPSF4-203ENST00000430038 RAD51AP2Q09MP3 1159 aa18.81■□□□□ 0.6
CPSF4-203ENST00000430038 TMEM132AQ24JP5 1023 aa18.81■□□□□ 0.6
CPSF4-203ENST00000430038 RSPO2Q6UXX9 243 aaPredicted RBP18.81■□□□□ 0.6
CPSF4-203ENST00000430038 DTHD1Q6ZMT9 781 aa18.81■□□□□ 0.6
CPSF4-203ENST00000430038 CCDC149Q6ZUS6 474 aa18.81■□□□□ 0.6
CPSF4-203ENST00000430038 CEP57Q86XR8 500 aa18.81■□□□□ 0.6
CPSF4-203ENST00000430038 SUGP1Q8IWZ8 645 aaKnown RBP18.81■□□□□ 0.6
CPSF4-203ENST00000430038 UBALD2Q8IYN6 164 aa18.81■□□□□ 0.6
CPSF4-203ENST00000430038 PLCD3Q8N3E9 789 aa18.81■□□□□ 0.6
CPSF4-203ENST00000430038 TMEM105Q8N8V8 129 aa18.81■□□□□ 0.6
CPSF4-203ENST00000430038 C3orf58Q8NDZ4 430 aa18.81■□□□□ 0.6
CPSF4-203ENST00000430038 ZBTB45Q96K62 511 aaPredicted RBP18.81■□□□□ 0.6
CPSF4-203ENST00000430038 IFT74Q96LB3 600 aa18.81■□□□□ 0.6
CPSF4-203ENST00000430038 ZMAT2Q96NC0 199 aaKnown RBP18.81■□□□□ 0.6
CPSF4-203ENST00000430038 TARS2Q9BW92 718 aaKnown RBP18.81■□□□□ 0.6
CPSF4-203ENST00000430038 CDT1Q9H211 546 aa18.81■□□□□ 0.6
CPSF4-203ENST00000430038 KCNK12Q9HB15 430 aa18.81■□□□□ 0.6
CPSF4-203ENST00000430038 WDR6Q9NNW5 1121 aaKnown RBP18.81■□□□□ 0.6
CPSF4-203ENST00000430038 ARHGAP28Q9P2N2 729 aa18.81■□□□□ 0.6
CPSF4-203ENST00000430038 NPHP3-ACAD11A0A0J9YXS1 232 aa18.8■□□□□ 0.6
CPSF4-203ENST00000430038 CCDC169A6NNP5 214 aa18.8■□□□□ 0.6
CPSF4-203ENST00000430038 NARSO43776 548 aaKnown RBP18.8■□□□□ 0.6
CPSF4-203ENST00000430038 CLCNKBP51801 687 aa18.8■□□□□ 0.6
CPSF4-203ENST00000430038 EFNA5P52803 228 aa18.8■□□□□ 0.6
CPSF4-203ENST00000430038 OSTNP61366 133 aa18.8■□□□□ 0.6
CPSF4-203ENST00000430038 HYIQ5T013 277 aa18.8■□□□□ 0.6
CPSF4-203ENST00000430038 KRT79Q5XKE5 535 aa18.8■□□□□ 0.6
CPSF4-203ENST00000430038 GPR65Q8IYL9 337 aa18.8■□□□□ 0.6
CPSF4-203ENST00000430038 PIK3R5Q8WYR1 880 aa18.8■□□□□ 0.6
CPSF4-203ENST00000430038 SMG7Q92540 1137 aaKnown RBP18.8■□□□□ 0.6
CPSF4-203ENST00000430038 ADPGKQ9BRR6 497 aa18.8■□□□□ 0.6
CPSF4-203ENST00000430038 TTPALQ9BTX7 342 aa18.8■□□□□ 0.6
CPSF4-203ENST00000430038 SF3B1O75533 1304 aaKnown RBP eCLIP18.79■□□□□ 0.62e-6■■■■■ 59.4
CPSF4-203ENST00000430038 SMIM28A0A1B0GU29 152 aa18.79■□□□□ 0.6
CPSF4-203ENST00000430038 I3L4J1 428 aa18.79■□□□□ 0.6
CPSF4-203ENST00000430038 LAD1O00515 517 aa18.79■□□□□ 0.6
CPSF4-203ENST00000430038 SLC16A4O15374 487 aa18.79■□□□□ 0.6
CPSF4-203ENST00000430038 NPR3P17342 541 aa18.79■□□□□ 0.6
CPSF4-203ENST00000430038 PROZP22891 400 aa18.79■□□□□ 0.6
CPSF4-203ENST00000430038 GRIN1Q05586 938 aa18.79■□□□□ 0.6
CPSF4-203ENST00000430038 ZRSR1Q15695 479 aaKnown RBP18.79■□□□□ 0.6
CPSF4-203ENST00000430038 DCAF4L1Q3SXM0 396 aa18.79■□□□□ 0.6
CPSF4-203ENST00000430038 ARSHQ5FYA8 562 aa18.79■□□□□ 0.6
CPSF4-203ENST00000430038 XKR4Q5GH76 650 aa18.79■□□□□ 0.6
CPSF4-203ENST00000430038 OTOP3Q7RTS5 596 aa18.79■□□□□ 0.6
CPSF4-203ENST00000430038 RHOBTB2Q9BYZ6 727 aa18.79■□□□□ 0.6
CPSF4-203ENST00000430038 HAPLN2Q9GZV7 340 aa18.79■□□□□ 0.6
CPSF4-203ENST00000430038 TMEM134Q9H6X4 195 aa18.79■□□□□ 0.6
CPSF4-203ENST00000430038 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.79■□□□□ 0.6
CPSF4-203ENST00000430038 FAM86C1Q9NVL1 165 aa18.79■□□□□ 0.6
CPSF4-203ENST00000430038 CLUHO75153 1309 aa18.78■□□□□ 0.6
CPSF4-203ENST00000430038 VWA3AA6NCI4 1184 aa18.78■□□□□ 0.6
CPSF4-203ENST00000430038 BRCC3P46736 316 aa18.78■□□□□ 0.6
CPSF4-203ENST00000430038 SLC12A3P55017 1021 aa18.78■□□□□ 0.6
CPSF4-203ENST00000430038 NTHL1P78549 312 aa18.78■□□□□ 0.6
CPSF4-203ENST00000430038 CACNB1Q02641 598 aaPredicted RBP18.78■□□□□ 0.6
CPSF4-203ENST00000430038 UPP1Q16831 310 aa18.78■□□□□ 0.6
CPSF4-203ENST00000430038 SEZ6Q53EL9 994 aa18.78■□□□□ 0.6
CPSF4-203ENST00000430038 RILPL1Q5EBL4 403 aa18.78■□□□□ 0.6
CPSF4-203ENST00000430038 HDAC7Q8WUI4 952 aa18.78■□□□□ 0.6
CPSF4-203ENST00000430038 ACSF2Q96CM8 615 aaPredicted RBP18.78■□□□□ 0.6
CPSF4-203ENST00000430038 NTPCRQ9BSD7 190 aaKnown RBP18.78■□□□□ 0.6
CPSF4-203ENST00000430038 PRKD2Q9BZL6 878 aa18.78■□□□□ 0.6
CPSF4-203ENST00000430038 PLEKHA4Q9H4M7 779 aa18.78■□□□□ 0.6
CPSF4-203ENST00000430038 KMT5AQ9NQR1 393 aa18.78■□□□□ 0.6
CPSF4-203ENST00000430038 PHLPP2Q6ZVD8 1323 aa18.77■□□□□ 0.6
CPSF4-203ENST00000430038 PI15O43692 258 aa18.77■□□□□ 0.6
CPSF4-203ENST00000430038 ST18O60284 1047 aa18.77■□□□□ 0.6
CPSF4-203ENST00000430038 ZMYND10O75800 440 aa18.77■□□□□ 0.6
CPSF4-203ENST00000430038 FGFR3P22607 806 aa18.77■□□□□ 0.6
CPSF4-203ENST00000430038 GRM5P41594 1212 aa18.77■□□□□ 0.6
CPSF4-203ENST00000430038 PSMD5Q16401 504 aa18.77■□□□□ 0.6
CPSF4-203ENST00000430038 POTEHQ6S545 545 aa18.77■□□□□ 0.6
CPSF4-203ENST00000430038 SYT2Q8N9I0 419 aaPredicted RBP18.77■□□□□ 0.6
CPSF4-203ENST00000430038 TBC1D32Q96NH3 1257 aa18.77■□□□□ 0.6
CPSF4-203ENST00000430038 RAB34Q9BZG1 259 aa18.77■□□□□ 0.6
CPSF4-203ENST00000430038 FBXW11Q9UKB1 542 aa18.77■□□□□ 0.6
CPSF4-203ENST00000430038 VPS13AQ96RL7 3174 aa18.77■□□□□ 0.6
CPSF4-203ENST00000430038 TMEM189-UBE2V1I3L0A0 370 aa18.76■□□□□ 0.59
CPSF4-203ENST00000430038 B3GAT3O94766 335 aa18.76■□□□□ 0.59
CPSF4-203ENST00000430038 C1RP00736 705 aa18.76■□□□□ 0.59
CPSF4-203ENST00000430038 GUCY2CP25092 1073 aa18.76■□□□□ 0.59
CPSF4-203ENST00000430038 TKTP29401 623 aaKnown RBP18.76■□□□□ 0.59
CPSF4-203ENST00000430038 GBP2P32456 591 aaPredicted RBP18.76■□□□□ 0.59
CPSF4-203ENST00000430038 TDGQ13569 410 aa18.76■□□□□ 0.59
CPSF4-203ENST00000430038 ZNF568Q3ZCX4 644 aa18.76■□□□□ 0.59
CPSF4-203ENST00000430038 TMEM119Q4V9L6 283 aa18.76■□□□□ 0.59
CPSF4-203ENST00000430038 CWF19L1Q69YN2 538 aaKnown RBP18.76■□□□□ 0.59
CPSF4-203ENST00000430038 DCLRE1AQ6PJP8 1040 aa18.76■□□□□ 0.59
CPSF4-203ENST00000430038 TMEM161BQ8NDZ6 487 aa18.76■□□□□ 0.59
CPSF4-203ENST00000430038 C18orf25Q96B23 403 aaPredicted RBP18.76■□□□□ 0.59
CPSF4-203ENST00000430038 RPP25Q9BUL9 199 aaKnown RBP18.76■□□□□ 0.59
CPSF4-203ENST00000430038 ZDHHC7Q9NXF8 308 aa18.76■□□□□ 0.59
CPSF4-203ENST00000430038 EPS15L1Q9UBC2 864 aa18.76■□□□□ 0.59
CPSF4-203ENST00000430038 STK24Q9Y6E0 443 aa18.76■□□□□ 0.59
CPSF4-203ENST00000430038 MYH15Q9Y2K3 1946 aa18.76■□□□□ 0.59
CPSF4-203ENST00000430038 COL4A3Q01955 1670 aa18.76■□□□□ 0.59
CPSF4-203ENST00000430038 H0Y858 1186 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms