RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	FUT10	Q6P4F1	479 aa		19.52	■□□□□ 0.72
MRPL28-203	ENST00000429738	SIX5	Q8N196	739 aa		19.52	■□□□□ 0.72
MRPL28-203	ENST00000429738	KCTD17	Q8N5Z5	321 aa		19.52	■□□□□ 0.72
MRPL28-203	ENST00000429738	CMAS	Q8NFW8	434 aa	Predicted RBP	19.52	■□□□□ 0.72
MRPL28-203	ENST00000429738	RUSC1	Q9BVN2	902 aa		19.52	■□□□□ 0.72
MRPL28-203	ENST00000429738	GPR62	Q9BZJ7	368 aa		19.52	■□□□□ 0.72
MRPL28-203	ENST00000429738	CXCL16	Q9H2A7	254 aa		19.52	■□□□□ 0.72
MRPL28-203	ENST00000429738	ARHGAP28	Q9P2N2	729 aa		19.52	■□□□□ 0.72
MRPL28-203	ENST00000429738	SMC3	Q9UQE7	1217 aa		19.52	■□□□□ 0.72
MRPL28-203	ENST00000429738	DCHS1	Q96JQ0	3298 aa		19.52	■□□□□ 0.71
MRPL28-203	ENST00000429738	PHLPP2	Q6ZVD8	1323 aa		19.51	■□□□□ 0.71
MRPL28-203	ENST00000429738	C2CD2L	O14523	706 aa		19.51	■□□□□ 0.71
MRPL28-203	ENST00000429738	TEX28	O15482	410 aa		19.51	■□□□□ 0.71
MRPL28-203	ENST00000429738	HIP1R	O75146	1068 aa		19.51	■□□□□ 0.71
MRPL28-203	ENST00000429738	ADH1A	P07327	375 aa		19.51	■□□□□ 0.71
MRPL28-203	ENST00000429738	NPTX2	P47972	431 aa		19.51	■□□□□ 0.71
MRPL28-203	ENST00000429738	PNMA5	Q96PV4	448 aa		19.51	■□□□□ 0.71
MRPL28-203	ENST00000429738	PAAF1	Q9BRP4	392 aa		19.51	■□□□□ 0.71
MRPL28-203	ENST00000429738	TMEM134	Q9H6X4	195 aa		19.51	■□□□□ 0.71
MRPL28-203	ENST00000429738	WNT16	Q9UBV4	365 aa		19.51	■□□□□ 0.71
MRPL28-203	ENST00000429738	TNFSF13B	Q9Y275	285 aa		19.51	■□□□□ 0.71
MRPL28-203	ENST00000429738	CACNA1A	O00555	2505 aa		19.5	■□□□□ 0.71
MRPL28-203	ENST00000429738		K7ERI5	159 aa		19.5	■□□□□ 0.71
MRPL28-203	ENST00000429738	C1R	P00736	705 aa		19.5	■□□□□ 0.71
MRPL28-203	ENST00000429738	TH	P07101	528 aa		19.5	■□□□□ 0.71
MRPL28-203	ENST00000429738	LIG1	P18858	919 aa		19.5	■□□□□ 0.71
MRPL28-203	ENST00000429738	GUCY2C	P25092	1073 aa		19.5	■□□□□ 0.71
MRPL28-203	ENST00000429738	PEX3	P56589	373 aa		19.5	■□□□□ 0.71
MRPL28-203	ENST00000429738	DMP1	Q13316	513 aa	Predicted RBP	19.5	■□□□□ 0.71
MRPL28-203	ENST00000429738	CUL4A	Q13619	759 aa		19.5	■□□□□ 0.71
MRPL28-203	ENST00000429738	HSP90AA2P	Q14568	343 aa	Predicted RBP	19.5	■□□□□ 0.71
MRPL28-203	ENST00000429738	TMEM132A	Q24JP5	1023 aa		19.5	■□□□□ 0.71
MRPL28-203	ENST00000429738	ATF7IP2	Q5U623	682 aa		19.5	■□□□□ 0.71
MRPL28-203	ENST00000429738	LARP1B	Q659C4	914 aa	Known RBP	19.5	■□□□□ 0.71
MRPL28-203	ENST00000429738	CYP26C1	Q6V0L0	522 aa		19.5	■□□□□ 0.71
MRPL28-203	ENST00000429738	TAS1R3	Q7RTX0	852 aa		19.5	■□□□□ 0.71
MRPL28-203	ENST00000429738	DRC1	Q96MC2	740 aa		19.5	■□□□□ 0.71
MRPL28-203	ENST00000429738	TIPIN	Q9BVW5	301 aa		19.5	■□□□□ 0.71
MRPL28-203	ENST00000429738	RHOBTB2	Q9BYZ6	727 aa		19.5	■□□□□ 0.71
MRPL28-203	ENST00000429738	C17orf75	Q9HAS0	396 aa		19.5	■□□□□ 0.71
MRPL28-203	ENST00000429738	CACNG4	Q9UBN1	327 aa		19.5	■□□□□ 0.71
MRPL28-203	ENST00000429738	VWA8	A3KMH1	1905 aa		19.5	■□□□□ 0.71
MRPL28-203	ENST00000429738	VWA3A	A6NCI4	1184 aa		19.49	■□□□□ 0.71
MRPL28-203	ENST00000429738	PAPLN	O95428	1278 aa		19.49	■□□□□ 0.71
MRPL28-203	ENST00000429738	USP41	Q3LFD5	358 aa		19.49	■□□□□ 0.71
MRPL28-203	ENST00000429738	SYT2	Q8N9I0	419 aa	Predicted RBP	19.49	■□□□□ 0.71
MRPL28-203	ENST00000429738	RABGGTA	Q92696	567 aa		19.49	■□□□□ 0.71
MRPL28-203	ENST00000429738	ACO2	Q99798	780 aa	Known RBP	19.49	■□□□□ 0.71
MRPL28-203	ENST00000429738	NTPCR	Q9BSD7	190 aa	Known RBP	19.49	■□□□□ 0.71
MRPL28-203	ENST00000429738	NT5C3A	Q9H0P0	336 aa		19.49	■□□□□ 0.71
MRPL28-203	ENST00000429738	PTPRH	Q9HD43	1115 aa		19.49	■□□□□ 0.71
MRPL28-203	ENST00000429738	WDR6	Q9NNW5	1121 aa	Known RBP	19.49	■□□□□ 0.71
MRPL28-203	ENST00000429738	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	19.49	■□□□□ 0.71
MRPL28-203	ENST00000429738	FNIP2	Q9P278	1114 aa		19.49	■□□□□ 0.71
MRPL28-203	ENST00000429738	DPP7	Q9UHL4	492 aa		19.49	■□□□□ 0.71
MRPL28-203	ENST00000429738	CIT	O14578	2027 aa		19.48	■□□□□ 0.71
MRPL28-203	ENST00000429738	CCDC195	A0A1B0GUA6	201 aa		19.48	■□□□□ 0.71
MRPL28-203	ENST00000429738	CASTOR2	A6NHX0	329 aa		19.48	■□□□□ 0.71
MRPL28-203	ENST00000429738	CCDC169	A6NNP5	214 aa		19.48	■□□□□ 0.71
MRPL28-203	ENST00000429738	STK25	O00506	426 aa		19.48	■□□□□ 0.71
MRPL28-203	ENST00000429738	NARS	O43776	548 aa	Known RBP	19.48	■□□□□ 0.71
MRPL28-203	ENST00000429738	N4BP1	O75113	896 aa	Known RBP	19.48	■□□□□ 0.71
MRPL28-203	ENST00000429738	TMEM119	Q4V9L6	283 aa		19.48	■□□□□ 0.71
MRPL28-203	ENST00000429738	STAM	Q92783	540 aa		19.48	■□□□□ 0.71
MRPL28-203	ENST00000429738	B3GALT6	Q96L58	329 aa		19.48	■□□□□ 0.71
MRPL28-203	ENST00000429738	SEMA4A	Q9H3S1	761 aa		19.48	■□□□□ 0.71
MRPL28-203	ENST00000429738	MAN1C1	Q9NR34	630 aa		19.48	■□□□□ 0.71
MRPL28-203	ENST00000429738	GDA	Q9Y2T3	454 aa		19.48	■□□□□ 0.71
MRPL28-203	ENST00000429738	RBM19	Q9Y4C8	960 aa	Known RBP	19.48	■□□□□ 0.71
MRPL28-203	ENST00000429738	SF3B1	O75533	1304 aa	Known RBP eCLIP	19.48	■□□□□ 0.71	4e-8	■■■■■ 34.5
MRPL28-203	ENST00000429738	ABLIM1	O14639	778 aa		19.47	■□□□□ 0.71
MRPL28-203	ENST00000429738	TADA2A	O75478	443 aa		19.47	■□□□□ 0.71
MRPL28-203	ENST00000429738	KIF4A	O95239	1232 aa		19.47	■□□□□ 0.71
MRPL28-203	ENST00000429738	GLUD1	P00367	558 aa		19.47	■□□□□ 0.71
MRPL28-203	ENST00000429738	PROZ	P22891	400 aa		19.47	■□□□□ 0.71
MRPL28-203	ENST00000429738	GBP2	P32456	591 aa	Predicted RBP	19.47	■□□□□ 0.71
MRPL28-203	ENST00000429738	SLC12A3	P55017	1021 aa		19.47	■□□□□ 0.71
MRPL28-203	ENST00000429738	XKR4	Q5GH76	650 aa		19.47	■□□□□ 0.71
MRPL28-203	ENST00000429738	ELMSAN1	Q6PJG2	1045 aa		19.47	■□□□□ 0.71
MRPL28-203	ENST00000429738	SLC44A3	Q8N4M1	653 aa		19.47	■□□□□ 0.71
MRPL28-203	ENST00000429738	HDAC7	Q8WUI4	952 aa		19.47	■□□□□ 0.71
MRPL28-203	ENST00000429738	RSAD2	Q8WXG1	361 aa		19.47	■□□□□ 0.71
MRPL28-203	ENST00000429738	NXPE3	Q969Y0	559 aa		19.47	■□□□□ 0.71
MRPL28-203	ENST00000429738	AK8	Q96MA6	479 aa		19.47	■□□□□ 0.71
MRPL28-203	ENST00000429738	PPP1R10	Q96QC0	940 aa	Known RBP	19.47	■□□□□ 0.71
MRPL28-203	ENST00000429738	MRPL4	Q9BYD3	311 aa	Known RBP	19.47	■□□□□ 0.71
MRPL28-203	ENST00000429738	KMT5A	Q9NQR1	393 aa		19.47	■□□□□ 0.71
MRPL28-203	ENST00000429738	KCND2	Q9NZV8	630 aa		19.47	■□□□□ 0.71
MRPL28-203	ENST00000429738	EPS15L1	Q9UBC2	864 aa		19.47	■□□□□ 0.71
MRPL28-203	ENST00000429738	DOCK8	Q8NF50	2099 aa		19.47	■□□□□ 0.71
MRPL28-203	ENST00000429738	KRBA1	A5PL33	1030 aa		19.46	■□□□□ 0.71
MRPL28-203	ENST00000429738	SLC26A4	O43511	780 aa		19.46	■□□□□ 0.71
MRPL28-203	ENST00000429738	CFH	P08603	1231 aa		19.46	■□□□□ 0.71
MRPL28-203	ENST00000429738	GRM5	P41594	1212 aa		19.46	■□□□□ 0.71
MRPL28-203	ENST00000429738	ZRSR1	Q15695	479 aa	Known RBP	19.46	■□□□□ 0.71
MRPL28-203	ENST00000429738	RTP2	Q5QGT7	225 aa		19.46	■□□□□ 0.71
MRPL28-203	ENST00000429738	LILRA6	Q6PI73	481 aa		19.46	■□□□□ 0.71
MRPL28-203	ENST00000429738	ALKAL1	Q6UXT8	129 aa		19.46	■□□□□ 0.71
MRPL28-203	ENST00000429738	BRAP	Q7Z569	592 aa		19.46	■□□□□ 0.71
MRPL28-203	ENST00000429738	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	19.46	■□□□□ 0.71

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms