RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 UNCXA6NJT0 531 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 USP2O75604 605 aaPredicted RBP9.35□□□□□ -0.91
GABPB1-205ENST00000429662 LYPLA2O95372 231 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 GH2P01242 217 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 GHRP10912 638 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 ITGA4P13612 1032 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 CTNNA2P26232 953 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 HPDP32754 393 aaPredicted RBP9.35□□□□□ -0.91
GABPB1-205ENST00000429662 NF2P35240 595 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 FNTAP49354 379 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 VAMP7P51809 220 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 SMTNP53814 917 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 PMS2P54278 862 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 MAPK7Q13164 816 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 TRADDQ15628 312 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 SKIDA1Q1XH10 827 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 GKAP1Q5VSY0 366 aaPredicted RBP9.35□□□□□ -0.91
GABPB1-205ENST00000429662 DENND2CQ68D51 928 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 B3GNT9Q6UX72 402 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 SYDE1Q6ZW31 735 aaPredicted RBP9.35□□□□□ -0.91
GABPB1-205ENST00000429662 CYFIP1Q7L576 1253 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 USP37Q86T82 979 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 CACNA2D3Q8IZS8 1091 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 OLIG1Q8TAK6 271 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 PIGOQ8TEQ8 1089 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 HVCN1Q96D96 273 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 SLC10A4Q96EP9 437 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 ROPN1BQ9BZX4 212 aaPredicted RBP9.35□□□□□ -0.91
GABPB1-205ENST00000429662 GPR88Q9GZN0 384 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 NEUROG2Q9H2A3 272 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 VCPKMTQ9H867 229 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 ROPN1Q9HAT0 212 aaPredicted RBP9.35□□□□□ -0.91
GABPB1-205ENST00000429662 BCCIPQ9P287 314 aaKnown RBP eCLIP9.35□□□□□ -0.91
GABPB1-205ENST00000429662 FEM1BQ9UK73 627 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 AJAP1Q9UKB5 411 aaPredicted RBP9.35□□□□□ -0.91
GABPB1-205ENST00000429662 PPP1R9AQ9ULJ8 1098 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 NOVA2Q9UNW9 492 aaKnown RBP9.35□□□□□ -0.91
GABPB1-205ENST00000429662 EXOC7Q9UPT5 735 aa9.35□□□□□ -0.91
GABPB1-205ENST00000429662 DOCK3Q8IZD9 2030 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 CHD9Q3L8U1 2897 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 SFI1A8K8P3 1242 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 GDF11O95390 407 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 CFBP00751 764 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 AGTP01019 485 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 P4HBP07237 508 aaKnown RBP9.34□□□□□ -0.91
GABPB1-205ENST00000429662 VCAM1P19320 739 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 COL9A1P20849 921 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 ATP5DP30049 168 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 HOXA13P31271 388 aaPredicted RBP9.34□□□□□ -0.91
GABPB1-205ENST00000429662 HNRNPH1P31943 449 aaKnown RBP9.34□□□□□ -0.91
GABPB1-205ENST00000429662 ABCD1P33897 745 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 MAN1A1P33908 653 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 CYP2J2P51589 502 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 MFAP3P55082 362 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 KCNA1Q09470 495 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 PRPF4BQ13523 1007 aaKnown RBP9.34□□□□□ -0.91
GABPB1-205ENST00000429662 CYP1B1Q16678 543 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 PROX2Q3B8N5 592 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 CBWD6Q4V339 395 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 EPC2Q52LR7 807 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 ZC2HC1CQ53FD0 456 aaPredicted RBP9.34□□□□□ -0.91
GABPB1-205ENST00000429662 LACTB2Q53H82 288 aaPredicted RBP9.34□□□□□ -0.91
GABPB1-205ENST00000429662 CBWD3Q5JTY5 395 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 CBWD5Q5RIA9 395 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 RNF187Q5TA31 235 aaPredicted RBP9.34□□□□□ -0.91
GABPB1-205ENST00000429662 GJB7Q6PEY0 223 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 DDX42Q86XP3 938 aaKnown RBP eCLIP9.34□□□□□ -0.91
GABPB1-205ENST00000429662 JAMLQ86YT9 394 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 APOBEC3FQ8IUX4 373 aaKnown RBP9.34□□□□□ -0.91
GABPB1-205ENST00000429662 KIAA0825Q8IV33 1275 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 ANKS4BQ8N8V4 417 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 XXYLT1Q8NBI6 393 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 LMO3Q8TAP4 145 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 ATP8B4Q8TF62 1192 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 KIFAP3Q92845 792 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 ZSWIM1Q9BR11 485 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 MXRA8Q9BRK3 442 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 WDR18Q9BV38 432 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 NSRP1Q9H0G5 558 aaKnown RBP9.34□□□□□ -0.91
GABPB1-205ENST00000429662 THAP2Q9H0W7 228 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 KDM4CQ9H3R0 1056 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.34□□□□□ -0.91
GABPB1-205ENST00000429662 OSGEPQ9NPF4 335 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 PPANQ9NQ55 473 aaKnown RBP9.34□□□□□ -0.91
GABPB1-205ENST00000429662 ZDHHC18Q9NUE0 388 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 CTTNBP2NLQ9P2B4 639 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 UVRAGQ9P2Y5 699 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 ALG6Q9Y672 507 aa9.34□□□□□ -0.91
GABPB1-205ENST00000429662 ANKRD65E5RJM6 399 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 FOXN3O00409 490 aaPredicted RBP9.33□□□□□ -0.92
GABPB1-205ENST00000429662 KIAA0391O15091 583 aaKnown RBP9.33□□□□□ -0.92
GABPB1-205ENST00000429662 ASAP2O43150 1006 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 HIP1RO75146 1068 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 FARP2O94887 1054 aaPredicted RBP9.33□□□□□ -0.92
GABPB1-205ENST00000429662 FTLP02792 175 aaPredicted RBP9.33□□□□□ -0.92
GABPB1-205ENST00000429662 ALAS1P13196 640 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 CCL5P13501 91 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 RARGP13631 454 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 PLS3P13797 630 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 ABCB4P21439 1286 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms