RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 RAB30Q15771 203 aa7.74□□□□□ -1.17
PTPRK-211ENST00000429595 CRIP3Q6Q6R5 217 aa7.74□□□□□ -1.17
PTPRK-211ENST00000429595 SORCS2Q96PQ0 1159 aa7.74□□□□□ -1.17
PTPRK-211ENST00000429595 MYD88Q99836 296 aa7.74□□□□□ -1.17
PTPRK-211ENST00000429595 MEGF9Q9H1U4 602 aa7.74□□□□□ -1.17
PTPRK-211ENST00000429595 HYPKQ9NX55 129 aa7.74□□□□□ -1.17
PTPRK-211ENST00000429595 ASH2LQ9UBL3 628 aa7.74□□□□□ -1.17
PTPRK-211ENST00000429595 DBF4Q9UBU7 674 aaPredicted RBP7.74□□□□□ -1.17
PTPRK-211ENST00000429595 DGKIO75912 1065 aa7.73□□□□□ -1.17
PTPRK-211ENST00000429595 DDAH1O94760 285 aa7.73□□□□□ -1.17
PTPRK-211ENST00000429595 TRIM60Q495X7 471 aa7.73□□□□□ -1.17
PTPRK-211ENST00000429595 TNNI3KQ59H18 835 aa7.73□□□□□ -1.17
PTPRK-211ENST00000429595 PHF19Q5T6S3 580 aa7.73□□□□□ -1.17
PTPRK-211ENST00000429595 MFSD14CQ5VZR4 134 aa7.73□□□□□ -1.17
PTPRK-211ENST00000429595 ZNF585AQ6P3V2 769 aa7.73□□□□□ -1.17
PTPRK-211ENST00000429595 CIR1Q86X95 450 aaPredicted RBP7.73□□□□□ -1.17
PTPRK-211ENST00000429595 KLHL36Q8N4N3 616 aa7.73□□□□□ -1.17
PTPRK-211ENST00000429595 SOCS4Q8WXH5 440 aa7.73□□□□□ -1.17
PTPRK-211ENST00000429595 LPAR1Q92633 364 aa7.73□□□□□ -1.17
PTPRK-211ENST00000429595 TEKT1Q969V4 418 aa7.73□□□□□ -1.17
PTPRK-211ENST00000429595 SMOC1Q9H4F8 434 aa7.73□□□□□ -1.17
PTPRK-211ENST00000429595 GREM2Q9H772 168 aa7.73□□□□□ -1.17
PTPRK-211ENST00000429595 HSPBP1Q9NZL4 362 aa7.73□□□□□ -1.17
PTPRK-211ENST00000429595 PPARGC1AQ9UBK2 798 aaKnown RBP7.73□□□□□ -1.17
PTPRK-211ENST00000429595 NCOR1O75376 2440 aa7.73□□□□□ -1.17
PTPRK-211ENST00000429595 RPAP1Q9BWH6 1393 aaPredicted RBP7.72□□□□□ -1.17
PTPRK-211ENST00000429595 TRIM43BA6NCK2 446 aa7.72□□□□□ -1.17
PTPRK-211ENST00000429595 SLPIP03973 132 aa7.72□□□□□ -1.17
PTPRK-211ENST00000429595 ITGB8P26012 769 aa7.72□□□□□ -1.17
PTPRK-211ENST00000429595 ETFBP38117 255 aa7.72□□□□□ -1.17
PTPRK-211ENST00000429595 RGS2P41220 211 aa7.72□□□□□ -1.17
PTPRK-211ENST00000429595 CHRNDQ07001 517 aa7.72□□□□□ -1.17
PTPRK-211ENST00000429595 NFATC3Q12968 1075 aa7.72□□□□□ -1.17
PTPRK-211ENST00000429595 GJC2Q5T442 439 aaPredicted RBP7.72□□□□□ -1.17
PTPRK-211ENST00000429595 FKBP1CQ5VVH2 108 aa7.72□□□□□ -1.17
PTPRK-211ENST00000429595 TRMT10BQ6PF06 316 aaKnown RBP7.72□□□□□ -1.17
PTPRK-211ENST00000429595 ARHGEF18Q6ZSZ5 1173 aa7.72□□□□□ -1.17
PTPRK-211ENST00000429595 NUDT10Q8NFP7 164 aa7.72□□□□□ -1.17
PTPRK-211ENST00000429595 TTLL11Q8NHH1 800 aa7.72□□□□□ -1.17
PTPRK-211ENST00000429595 TDRD7Q8NHU6 1098 aaKnown RBP7.72□□□□□ -1.17
PTPRK-211ENST00000429595 PHOSPHO1Q8TCT1 267 aa7.72□□□□□ -1.17
PTPRK-211ENST00000429595 TRIM43Q96BQ3 446 aaPredicted RBP7.72□□□□□ -1.17
PTPRK-211ENST00000429595 NUDT11Q96G61 164 aa7.72□□□□□ -1.17
PTPRK-211ENST00000429595 FTSJ1Q9UET6 329 aa7.72□□□□□ -1.17
PTPRK-211ENST00000429595 PRKAG3Q9UGI9 489 aa7.72□□□□□ -1.17
PTPRK-211ENST00000429595 DDX20Q9UHI6 824 aaKnown RBP7.72□□□□□ -1.17
PTPRK-211ENST00000429595 ZNF112Q9UJU3 913 aa7.72□□□□□ -1.17
PTPRK-211ENST00000429595 AGTPBP1Q9UPW5 1226 aa7.72□□□□□ -1.17
PTPRK-211ENST00000429595 LRRFIP2Q9Y608 721 aaKnown RBP7.72□□□□□ -1.17
PTPRK-211ENST00000429595 TRIM75PA6NK02 468 aa7.71□□□□□ -1.18
PTPRK-211ENST00000429595 PATE3B3GLJ2 98 aa7.71□□□□□ -1.18
PTPRK-211ENST00000429595 SUV39H1O43463 412 aa7.71□□□□□ -1.18
PTPRK-211ENST00000429595 B4GALT4O60513 344 aa7.71□□□□□ -1.18
PTPRK-211ENST00000429595 FRAT2O75474 233 aaPredicted RBP7.71□□□□□ -1.18
PTPRK-211ENST00000429595 TAF5LO75529 589 aa7.71□□□□□ -1.18
PTPRK-211ENST00000429595 CYP7B1O75881 506 aa7.71□□□□□ -1.18
PTPRK-211ENST00000429595 NFE2L2Q16236 605 aa7.71□□□□□ -1.18
PTPRK-211ENST00000429595 SLC10A6Q3KNW5 377 aa7.71□□□□□ -1.18
PTPRK-211ENST00000429595 PALM2Q8IXS6 379 aa7.71□□□□□ -1.18
PTPRK-211ENST00000429595 PIP4K2CQ8TBX8 421 aa7.71□□□□□ -1.18
PTPRK-211ENST00000429595 FAM151AQ8WW52 585 aa7.71□□□□□ -1.18
PTPRK-211ENST00000429595 ZNF747Q9BV97 191 aa7.71□□□□□ -1.18
PTPRK-211ENST00000429595 JAM3Q9BX67 310 aa7.71□□□□□ -1.18
PTPRK-211ENST00000429595 BABAM1Q9NWV8 329 aa7.71□□□□□ -1.18
PTPRK-211ENST00000429595 COL3A1P02461 1466 aaPredicted RBP7.7□□□□□ -1.18
PTPRK-211ENST00000429595 GRXCR1A8MXD5 290 aa7.7□□□□□ -1.18
PTPRK-211ENST00000429595 PLIN1O60240 522 aa7.7□□□□□ -1.18
PTPRK-211ENST00000429595 GLRX3O76003 335 aaKnown RBP7.7□□□□□ -1.18
PTPRK-211ENST00000429595 KLHL18O94889 574 aa7.7□□□□□ -1.18
PTPRK-211ENST00000429595 GJB6O95452 261 aa7.7□□□□□ -1.18
PTPRK-211ENST00000429595 CLTBP09497 229 aa7.7□□□□□ -1.18
PTPRK-211ENST00000429595 HSPA5P11021 654 aaKnown RBP7.7□□□□□ -1.18
PTPRK-211ENST00000429595 ACVRL1P37023 503 aa7.7□□□□□ -1.18
PTPRK-211ENST00000429595 PPP2R2AP63151 447 aa7.7□□□□□ -1.18
PTPRK-211ENST00000429595 TLE2Q04725 743 aa7.7□□□□□ -1.18
PTPRK-211ENST00000429595 TCP10Q12799 353 aa7.7□□□□□ -1.18
PTPRK-211ENST00000429595 C15orf52Q6ZUT6 534 aaKnown RBP7.7□□□□□ -1.18
PTPRK-211ENST00000429595 SCYL3Q8IZE3 742 aa7.7□□□□□ -1.18
PTPRK-211ENST00000429595 DTX3Q8N9I9 347 aa7.7□□□□□ -1.18
PTPRK-211ENST00000429595 CLEC4DQ8WXI8 215 aa7.7□□□□□ -1.18
PTPRK-211ENST00000429595 FERMT2Q96AC1 680 aa7.7□□□□□ -1.18
PTPRK-211ENST00000429595 MTIF3Q9H2K0 278 aaKnown RBP7.7□□□□□ -1.18
PTPRK-211ENST00000429595 PNNQ9H307 717 aaKnown RBP7.7□□□□□ -1.18
PTPRK-211ENST00000429595 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.7□□□□□ -1.18
PTPRK-211ENST00000429595 ADAM29Q9UKF5 820 aa7.7□□□□□ -1.18
PTPRK-211ENST00000429595 ZDHHC9Q9Y397 364 aa7.7□□□□□ -1.18
PTPRK-211ENST00000429595 AFG3L2Q9Y4W6 797 aa7.7□□□□□ -1.18
PTPRK-211ENST00000429595 ARAP2Q8WZ64 1704 aa7.69□□□□□ -1.18
PTPRK-211ENST00000429595 LTBP2Q14767 1821 aa7.69□□□□□ -1.18
PTPRK-211ENST00000429595 SLC27A2O14975 620 aa7.69□□□□□ -1.18
PTPRK-211ENST00000429595 DDX58O95786 925 aaKnown RBP7.69□□□□□ -1.18
PTPRK-211ENST00000429595 SSBP05455 408 aaKnown RBP eCLIP7.69□□□□□ -1.18
PTPRK-211ENST00000429595 MAPK4P31152 587 aa7.69□□□□□ -1.18
PTPRK-211ENST00000429595 ADCYAP1R1P41586 468 aa7.69□□□□□ -1.18
PTPRK-211ENST00000429595 GRIN1Q05586 938 aa7.69□□□□□ -1.18
PTPRK-211ENST00000429595 MAP4K2Q12851 820 aa7.69□□□□□ -1.18
PTPRK-211ENST00000429595 PPIGQ13427 754 aaKnown RBP eCLIP7.69□□□□□ -1.184e-12■□□□□ 8.2
PTPRK-211ENST00000429595 FXNQ16595 210 aa7.69□□□□□ -1.18
PTPRK-211ENST00000429595 CCL14Q16627 93 aa7.69□□□□□ -1.18
PTPRK-211ENST00000429595 SLFN13Q68D06 897 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms