RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 IL9RQ01113 521 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 BNIP1Q12981 228 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 TBC1D10BQ4KMP7 808 aaPredicted RBP15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 B3GNT6Q6ZMB0 384 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 FAM186BQ8IYM0 893 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 PLVAPQ9BX97 442 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 ARHGEF3Q9NR81 526 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 NKX1-2Q9UD57 310 aaPredicted RBP15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 ZMYND8Q9ULU4 1186 aaPredicted RBP15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 TDRKHQ9Y2W6 561 aaKnown RBP15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 NHSQ6T4R5 1651 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 AGTP01019 485 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 CCNG1P51959 295 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 PEX26Q7Z412 305 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 TTC1Q99614 292 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 TMEM47Q9BQJ4 181 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 TBC1D23Q9NUY8 699 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 CCDC188H7C350 402 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 NMT2O60551 498 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 ENTPD5O75356 428 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 ANXA13P27216 316 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 KIF22Q14807 665 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 EAPPQ56P03 285 aaPredicted RBP15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 PPP1R18Q6NYC8 613 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 RASSF3Q86WH2 238 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 AGBL3Q8NEM8 1001 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 GRAMD1AQ96CP6 724 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 Q9H521 79 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 CNGB3Q9NQW8 809 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 MRGBPQ9NV56 204 aa15.32■□□□□ 0.04
SYNGAP1-203ENST00000428982 HTR3EA5X5Y0 456 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 WDR46O15213 610 aaKnown RBP15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 ENTPD3O75355 529 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 KCNA2P16389 499 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 PLTPP55058 493 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 DSG1Q02413 1049 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 MKRN3Q13064 507 aaKnown RBP15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 NAT14Q8WUY8 206 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 AGPAT5Q9NUQ2 364 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 RNF181Q9P0P0 153 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 PGRMC1O00264 195 aaKnown RBP15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 UNC5CO95185 931 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 ASMTLO95671 621 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 PSMC1P62191 440 aaKnown RBP15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 HPCAP84074 193 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 SLC34A1Q06495 639 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 SUPT20HL1Q3ZLR7 823 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 C6orf183Q5T699 404 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 LMBRD2Q68DH5 695 aaPredicted RBP15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 APTXQ7Z2E3 356 aaKnown RBP15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 ZNF280CQ8ND82 737 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 POLR3CQ9BUI4 534 aaPredicted RBP15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 CCDC28BQ9BUN5 200 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 VPS33BQ9H267 617 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 PAPPAQ13219 1627 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 LRRC53A6NM62 1247 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 HDAC4P56524 1084 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 PPIDQ08752 370 aaKnown RBP15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 PTPROQ16827 1216 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 ARMCX3Q9UH62 379 aaPredicted RBP15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 CSADQ9Y600 493 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 STAMBPO95630 424 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 H2AFZP0C0S5 128 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 FUT2Q10981 343 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 H2AFVQ71UI9 128 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 DDHD1Q8NEL9 900 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 ZNF507Q8TCN5 953 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 ATP8B4Q8TF62 1192 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 TNFRSF25Q93038 417 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 CEP95Q96GE4 821 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 TUBGCP5Q96RT8 1024 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 SYNCQ9H7C4 482 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 PCDHA12Q9UN75 941 aa15.31■□□□□ 0.04
SYNGAP1-203ENST00000428982 CBFA2T3O75081 653 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 FGRP09769 529 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 TUFMP49411 452 aaKnown RBP15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 STRN3Q13033 797 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 USP17L2Q6R6M4 530 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 MIGA2Q7L4E1 593 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 SLFN12Q8IYM2 578 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 RAD54LQ92698 747 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 ZDHHC15Q96MV8 337 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 TMEM237Q96Q45 408 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 HERC5Q9UII4 1024 aaKnown RBP15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 SMIM31A0A1B0GVY4 71 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 EARS2Q5JPH6 523 aaKnown RBP15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 C16orf86Q6ZW13 317 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 SAMD3Q8N6K7 520 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 DEPTORQ8TB45 409 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 ANKS1AQ92625 1134 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 DDX47Q9H0S4 455 aaKnown RBP15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 ZFP69BQ9UJL9 534 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 AMFRQ9UKV5 643 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 ARIH1Q9Y4X5 557 aaPredicted RBP15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 FAM196BA6NMK8 535 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 STRNO43815 780 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 PALMO75781 387 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 LYNP07948 512 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 RPS12P25398 132 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms