RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 ORC1Q13415 861 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 TAF2Q6P1X5 1199 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 MTERF4Q7Z6M4 381 aaKnown RBP10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 SMG8Q8ND04 991 aaKnown RBP10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 PARD3BQ8TEW8 1205 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 ADAM2Q99965 735 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 TSEN34Q9BSV6 310 aaKnown RBP10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 TMEM106CQ9BVX2 250 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 IFIH1Q9BYX4 1025 aaKnown RBP10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 PRMT7Q9NVM4 692 aaPredicted RBP10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 PARP2Q9UGN5 583 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 TFR2Q9UP52 801 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 TRPV2Q9Y5S1 764 aa10.34□□□□□ -0.75
HMGCLL1-206ENST00000428842 A0A0U1RQJ8 604 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 GAS2O43903 313 aaKnown RBP10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 B4GALT3O60512 393 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 UPP2O95045 317 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 GYPCP04921 128 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 CSF2RAP15509 400 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 DNTTIP2Q5QJE6 756 aaKnown RBP10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 ZC3H3Q8IXZ2 948 aaKnown RBP10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 ATRIPQ8WXE1 791 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 TRIM6Q9C030 488 aaPredicted RBP10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 TMEM117Q9H0C3 514 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 MIOSQ9NXC5 875 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 TUBGCP4Q9UGJ1 667 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 INPP5FQ9Y2H2 1132 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 TRIOBPQ9H2D6 2365 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 CCDC85CA6NKD9 419 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 LGALS16A8MUM7 142 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 M0QZ92 97 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 ASAP2O43150 1006 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 HCRTO43612 131 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 RECQL4O94761 1208 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 PLEKP08567 350 aaPredicted RBP10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 RPL13P26373 211 aaKnown RBP10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 CDC25BP30305 580 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 MLH1P40692 756 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 TPM4P67936 248 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 MCL1Q07820 350 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 PTK7Q13308 1070 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 MTF1Q14872 753 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 TDRD10Q5VZ19 366 aaKnown RBP10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 JADE1Q6IE81 842 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 SARM1Q6SZW1 724 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 SV2AQ7L0J3 742 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 LRRC8DQ7L1W4 858 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 ARHGEF19Q8IW93 802 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 HASPINQ8TF76 798 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 CACTINQ8WUQ7 758 aaKnown RBP10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 TATDN2Q93075 761 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 C11orf49Q9H6J7 331 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 GCNT4Q9P109 453 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 CPSF3Q9UKF6 684 aaKnown RBP10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 ZMYND8Q9ULU4 1186 aaPredicted RBP10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 EXOC7Q9UPT5 735 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 IPPQ9Y573 584 aa10.33□□□□□ -0.76
HMGCLL1-206ENST00000428842 TTC26A0AVF1 554 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 LRRC10BA6NIK2 292 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 EXTL3O43909 919 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 NOL4O94818 638 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 KIF20AO95235 890 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 VNN1O95497 513 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 POMCP01189 267 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 EEF1GP26641 437 aaKnown RBP10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 PBX1P40424 430 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 FMO5P49326 533 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 SOX4Q06945 474 aaPredicted RBP10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 PAK2Q13177 524 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 MAN2A1Q16706 1144 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 SCARA5Q6ZMJ2 495 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 ZNF410Q86VK4 478 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 VSTM4Q8IW00 320 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 CEP63Q96MT8 703 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 LSM14BQ9BX40 385 aaKnown RBP10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 C2orf40Q9H1Z8 148 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 TMEM39AQ9NV64 488 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 TNFSF13BQ9Y275 285 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 STYXL1Q9Y6J8 313 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 ZNF233A6NK53 670 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 OGTO15294 1046 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 CABYRO75952 493 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 KRT19P08727 400 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 ATF7P17544 494 aaPredicted RBP10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 BIRC3Q13489 604 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 ARHGAP44Q17R89 818 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 CCDC142Q17RM4 750 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 PHLDB3Q6NSJ2 640 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 FBXL18Q96ME1 805 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 GAD1Q99259 594 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 SIK3Q9Y2K2 1263 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 PCDHB2Q9Y5E7 798 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 FHOD1Q9Y613 1164 aa10.32□□□□□ -0.76
HMGCLL1-206ENST00000428842 PIGRP01833 764 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 AFPP02771 609 aaKnown RBP10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 SKILP12757 684 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 SFPQP23246 707 aaKnown RBP eCLIP10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 PON1P27169 355 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 RAP1GAPP47736 663 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms