RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 SLC9C1Q4G0N8 1177 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 C10orf76Q5T2E6 689 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 WDR59Q6PJI9 974 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 RUFY4Q6ZNE9 571 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 RRAGAQ7L523 313 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 CATSPER4Q7RTX7 472 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 VPS36Q86VN1 386 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 CCAR2Q8N163 923 aaKnown RBP9.81□□□□□ -0.84
NR1I3-209ENST00000428574 CPLX3Q8WVH0 158 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 DNAJB3Q8WWF6 145 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 ZNF830Q96NB3 372 aaPredicted RBP9.81□□□□□ -0.84
NR1I3-209ENST00000428574 NT5C1BQ96P26 610 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 EIF3CQ99613 913 aaKnown RBP9.81□□□□□ -0.84
NR1I3-209ENST00000428574 CRACR2AQ9BSW2 395 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 CCDC94Q9BW85 323 aaPredicted RBP9.81□□□□□ -0.84
NR1I3-209ENST00000428574 IMPG2Q9BZV3 1241 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 SENP6Q9GZR1 1112 aaPredicted RBP9.81□□□□□ -0.84
NR1I3-209ENST00000428574 FAM49AQ9H0Q0 323 aaPredicted RBP9.81□□□□□ -0.84
NR1I3-209ENST00000428574 RPF1Q9H9Y2 349 aaKnown RBP9.81□□□□□ -0.84
NR1I3-209ENST00000428574 TOPORSQ9NS56 1045 aaPredicted RBP9.81□□□□□ -0.84
NR1I3-209ENST00000428574 RAB20Q9NX57 234 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 C2CD2Q9Y426 696 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 PTCH2Q9Y6C5 1203 aa9.81□□□□□ -0.84
NR1I3-209ENST00000428574 TTLL13PA6NNM8 815 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 F8VZ95 297 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 RBAK-RBAKDNI3L0D1 243 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 RNF225M0QZC1 329 aaPredicted RBP9.8□□□□□ -0.84
NR1I3-209ENST00000428574 NDUFA10O95299 355 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 STAU1O95793 577 aaKnown RBP9.8□□□□□ -0.84
NR1I3-209ENST00000428574 TNNC2P02585 160 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 DLATP10515 647 aaKnown RBP9.8□□□□□ -0.84
NR1I3-209ENST00000428574 TNNI1P19237 187 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 HOXA11P31270 313 aaPredicted RBP9.8□□□□□ -0.84
NR1I3-209ENST00000428574 ACOT2P49753 483 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 C1QTNF8P60827 252 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 MGAT3Q09327 533 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 HIC1Q14526 733 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 ENOX2Q16206 610 aaKnown RBP9.8□□□□□ -0.84
NR1I3-209ENST00000428574 WDR44Q5JSH3 913 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 EEF1DP3Q658K8 133 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 E4F1Q66K89 784 aaPredicted RBP9.8□□□□□ -0.84
NR1I3-209ENST00000428574 HGSNATQ68CP4 663 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 GDF6Q6KF10 455 aaPredicted RBP9.8□□□□□ -0.84
NR1I3-209ENST00000428574 HACE1Q8IYU2 909 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 CCDC155Q8N6L0 562 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 SHC3Q92529 594 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 CCDC127Q96BQ5 260 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 ANKRD36BP1Q96IX9 119 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 ZBTB45Q96K62 511 aaPredicted RBP9.8□□□□□ -0.84
NR1I3-209ENST00000428574 CCDC42Q96M95 316 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 VRTNQ9H8Y1 702 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 PDE11AQ9HCR9 933 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 C1orf112Q9NSG2 853 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 MYO1AQ9UBC5 1043 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 OGDHLQ9ULD0 1010 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 ADGRG1Q9Y653 693 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 EPN1Q9Y6I3 576 aaPredicted RBP9.8□□□□□ -0.84
NR1I3-209ENST00000428574 MROH7Q68CQ1 1323 aa9.8□□□□□ -0.84
NR1I3-209ENST00000428574 FRMPD3Q5JV73 1810 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 A0A1W2PQ45 241 aaPredicted RBP9.79□□□□□ -0.84
NR1I3-209ENST00000428574 A0A1W2PQY0 241 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 PITPNM1O00562 1244 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 GPR182O15218 404 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 TMEM191BP0C7N4 346 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 STAG3L1P0CL83 205 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 SKIP12755 728 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 ATICP31939 592 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 SOX5P35711 763 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 RAB27AP51159 221 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 YARSP54577 528 aaKnown RBP9.79□□□□□ -0.84
NR1I3-209ENST00000428574 IRX5P78411 483 aaPredicted RBP9.79□□□□□ -0.84
NR1I3-209ENST00000428574 HTRA3P83110 453 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 RAPGEF1Q13905 1077 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 BMS1Q14692 1282 aaKnown RBP9.79□□□□□ -0.84
NR1I3-209ENST00000428574 ASIC2Q16515 512 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 PTGISQ16647 500 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 PTPN21Q16825 1174 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 ASTE1Q2TB18 679 aaPredicted RBP9.79□□□□□ -0.84
NR1I3-209ENST00000428574 IQCEQ6IPM2 695 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 TTC39CQ8N584 583 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 ZSWIM2Q8NEG5 633 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 CAGE1Q8TC20 777 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 RSPH1Q8WYR4 309 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 ZBTB10Q96DT7 871 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 OSMRQ99650 979 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 TSGA10Q9BZW7 698 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 HAUS4Q9H6D7 363 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 NHEJ1Q9H9Q4 299 aaPredicted RBP9.79□□□□□ -0.84
NR1I3-209ENST00000428574 NLRC4Q9NPP4 1024 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 DNAJC12Q9UKB3 198 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 ITGA11Q9UKX5 1188 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 PPP2R2CQ9Y2T4 447 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 FHOD1Q9Y613 1164 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 GRIN2DO15399 1336 aa9.79□□□□□ -0.84
NR1I3-209ENST00000428574 KAT6AQ92794 2004 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 SOWAHDA6NJG2 315 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 ARVCFO00192 962 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 XPOTO43592 962 aaKnown RBP9.78□□□□□ -0.84
NR1I3-209ENST00000428574 PARNO95453 639 aaKnown RBP9.78□□□□□ -0.84
NR1I3-209ENST00000428574 ASS1P00966 412 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms