RNA–Protein interactions for RNA: ENST00000428336.5

TSPO-204, Transcript of translocator protein, humanhuman

TSL 5

Gene TSPO, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-204ENST00000428336 CACNB1Q02641 598 aaPredicted RBP16.91■□□□□ 0.3
TSPO-204ENST00000428336 RESTQ13127 1097 aa16.91■□□□□ 0.3
TSPO-204ENST00000428336 PTPAQ15257 358 aa16.91■□□□□ 0.3
TSPO-204ENST00000428336 PTPN21Q16825 1174 aa16.91■□□□□ 0.3
TSPO-204ENST00000428336 LILRA6Q6PI73 481 aa16.91■□□□□ 0.3
TSPO-204ENST00000428336 PRSS55Q6UWB4 352 aaPredicted RBP16.91■□□□□ 0.3
TSPO-204ENST00000428336 CD300LGQ6UXG3 332 aa16.91■□□□□ 0.3
TSPO-204ENST00000428336 C15orf39Q6ZRI6 1047 aa16.91■□□□□ 0.3
TSPO-204ENST00000428336 PALB2Q86YC2 1186 aa16.91■□□□□ 0.3
TSPO-204ENST00000428336 SNX21Q969T3 373 aa16.91■□□□□ 0.3
TSPO-204ENST00000428336 CALML4Q96GE6 196 aa16.91■□□□□ 0.3
TSPO-204ENST00000428336 INTS4Q96HW7 963 aaKnown RBP16.91■□□□□ 0.3
TSPO-204ENST00000428336 ZBTB45Q96K62 511 aaPredicted RBP16.91■□□□□ 0.3
TSPO-204ENST00000428336 CCDC94Q9BW85 323 aaPredicted RBP16.91■□□□□ 0.3
TSPO-204ENST00000428336 KCNG1Q9UIX4 513 aa16.91■□□□□ 0.3
TSPO-204ENST00000428336 USTQ9Y2C2 406 aa16.91■□□□□ 0.3
TSPO-204ENST00000428336 TECTAO75443 2155 aa16.9■□□□□ 0.3
TSPO-204ENST00000428336 TMEM221A6NGB7 291 aa16.9■□□□□ 0.3
TSPO-204ENST00000428336 SPDYE4A6NLX3 237 aa16.9■□□□□ 0.3
TSPO-204ENST00000428336 M0R296 226 aa16.9■□□□□ 0.3
TSPO-204ENST00000428336 MEFVO15553 781 aaPredicted RBP16.9■□□□□ 0.3
TSPO-204ENST00000428336 TGM5O43548 720 aa16.9■□□□□ 0.3
TSPO-204ENST00000428336 PAPLNO95428 1278 aa16.9■□□□□ 0.3
TSPO-204ENST00000428336 SPATA31D3P0C874 917 aa16.9■□□□□ 0.3
TSPO-204ENST00000428336 MYBP10242 640 aa16.9■□□□□ 0.3
TSPO-204ENST00000428336 RPL17P18621 184 aaKnown RBP16.9■□□□□ 0.3
TSPO-204ENST00000428336 SMTNP53814 917 aa16.9■□□□□ 0.3
TSPO-204ENST00000428336 KARSQ15046 597 aaKnown RBP16.9■□□□□ 0.3
TSPO-204ENST00000428336 FAM171A1Q5VUB5 890 aa16.9■□□□□ 0.3
TSPO-204ENST00000428336 MPZL3Q6UWV2 235 aa16.9■□□□□ 0.3
TSPO-204ENST00000428336 SPATA31D4Q6ZUB0 917 aa16.9■□□□□ 0.3
TSPO-204ENST00000428336 BMP8AQ7Z5Y6 402 aa16.9■□□□□ 0.3
TSPO-204ENST00000428336 GPBP1Q86WP2 473 aa16.9■□□□□ 0.3
TSPO-204ENST00000428336 ZDHHC14Q8IZN3 488 aa16.9■□□□□ 0.3
TSPO-204ENST00000428336 LNX1Q8TBB1 728 aaPredicted RBP16.9■□□□□ 0.3
TSPO-204ENST00000428336 HDAC7Q8WUI4 952 aa16.9■□□□□ 0.3
TSPO-204ENST00000428336 PIK3R5Q8WYR1 880 aa16.9■□□□□ 0.3
TSPO-204ENST00000428336 KCNN1Q92952 543 aa16.9■□□□□ 0.3
TSPO-204ENST00000428336 TCHPQ9BT92 498 aa16.9■□□□□ 0.3
TSPO-204ENST00000428336 TTPALQ9BTX7 342 aa16.9■□□□□ 0.3
TSPO-204ENST00000428336 CCDC195A0A1B0GUA6 201 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 TMEM189-UBE2V1I3L0A0 370 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 TOM1L1O75674 476 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 RFPL2O75678 378 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 B3GAT3O94766 335 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 PLCG1P19174 1290 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 CLCNKBP51801 687 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 YARSP54577 528 aaKnown RBP16.89■□□□□ 0.29
TSPO-204ENST00000428336 NCKAP1LP55160 1127 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 SOX4Q06945 474 aaPredicted RBP16.89■□□□□ 0.29
TSPO-204ENST00000428336 ELAVL2Q12926 359 aaKnown RBP16.89■□□□□ 0.29
TSPO-204ENST00000428336 STRN3Q13033 797 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 BECN1Q14457 450 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 UPP1Q16831 310 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 FAM173BQ6P4H8 233 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 DCLRE1AQ6PJP8 1040 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 USP49Q70CQ1 688 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 CEP57Q86XR8 500 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 GLYCTKQ8IVS8 523 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 TDRD5Q8NAT2 981 aaKnown RBP16.89■□□□□ 0.29
TSPO-204ENST00000428336 RAD54LQ92698 747 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 SNX27Q96L92 541 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 ZMAT2Q96NC0 199 aaKnown RBP16.89■□□□□ 0.29
TSPO-204ENST00000428336 ACAP3Q96P50 834 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 REEP2Q9BRK0 252 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 RHOBTB2Q9BYZ6 727 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 CCSER1Q9C0I3 900 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 GOLGA2P5Q9HBQ8 144 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 TOPORSQ9NS56 1045 aaPredicted RBP16.89■□□□□ 0.29
TSPO-204ENST00000428336 LARSQ9P2J5 1176 aaKnown RBP16.89■□□□□ 0.29
TSPO-204ENST00000428336 DPP7Q9UHL4 492 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 ODF2LQ9ULJ1 636 aa16.89■□□□□ 0.29
TSPO-204ENST00000428336 TDRD15B5MCY1 1934 aaKnown RBP16.88■□□□□ 0.29
TSPO-204ENST00000428336 KCNE1P15382 129 aa16.88■□□□□ 0.29
TSPO-204ENST00000428336 FGFR3P22607 806 aa16.88■□□□□ 0.29
TSPO-204ENST00000428336 MARCKSP29966 332 aaPredicted RBP16.88■□□□□ 0.29
TSPO-204ENST00000428336 ZNF131P52739 623 aa16.88■□□□□ 0.29
TSPO-204ENST00000428336 CREMQ03060 361 aa16.88■□□□□ 0.29
TSPO-204ENST00000428336 SIGLEC14Q08ET2 396 aa16.88■□□□□ 0.29
TSPO-204ENST00000428336 DHX8Q14562 1220 aaKnown RBP16.88■□□□□ 0.29
TSPO-204ENST00000428336 MCM6Q14566 821 aa16.88■□□□□ 0.29
TSPO-204ENST00000428336 SPECC1Q5M775 1068 aa16.88■□□□□ 0.29
TSPO-204ENST00000428336 CYP26C1Q6V0L0 522 aa16.88■□□□□ 0.29
TSPO-204ENST00000428336 ZPBP2Q6X784 338 aa16.88■□□□□ 0.29
TSPO-204ENST00000428336 CCDC149Q6ZUS6 474 aa16.88■□□□□ 0.29
TSPO-204ENST00000428336 KREMEN2Q8NCW0 462 aa16.88■□□□□ 0.29
TSPO-204ENST00000428336 C3orf58Q8NDZ4 430 aa16.88■□□□□ 0.29
TSPO-204ENST00000428336 ZNF707Q96C28 371 aaPredicted RBP16.88■□□□□ 0.29
TSPO-204ENST00000428336 ASIC4Q96FT7 647 aa16.88■□□□□ 0.29
TSPO-204ENST00000428336 EPSTI1Q96J88 318 aa16.88■□□□□ 0.29
TSPO-204ENST00000428336 UROC1Q96N76 676 aa16.88■□□□□ 0.29
TSPO-204ENST00000428336 CLSTN3Q9BQT9 956 aa16.88■□□□□ 0.29
TSPO-204ENST00000428336 HAPLN2Q9GZV7 340 aa16.88■□□□□ 0.29
TSPO-204ENST00000428336 PLEKHA4Q9H4M7 779 aa16.88■□□□□ 0.29
TSPO-204ENST00000428336 LIMD1Q9UGP4 676 aa16.88■□□□□ 0.29
TSPO-204ENST00000428336 FBXO2Q9UK22 296 aaPredicted RBP16.88■□□□□ 0.29
TSPO-204ENST00000428336 MTMR6Q9Y217 621 aa16.88■□□□□ 0.29
TSPO-204ENST00000428336 K7ELQ4 463 aaPredicted RBP16.87■□□□□ 0.29
TSPO-204ENST00000428336 ADAM12O43184 909 aa16.87■□□□□ 0.29
TSPO-204ENST00000428336 ASGR2P07307 311 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms