RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 PAAF1Q9BRP4 392 aa19.18■□□□□ 0.66
DDR1-235ENST00000428153 SPTBN4Q9H254 2564 aa19.17■□□□□ 0.66
DDR1-235ENST00000428153 CASTOR2A6NHX0 329 aa19.17■□□□□ 0.66
DDR1-235ENST00000428153 SPATA31D3P0C874 917 aa19.17■□□□□ 0.66
DDR1-235ENST00000428153 U2AF2P26368 475 aaKnown RBP eCLIP19.17■□□□□ 0.66
DDR1-235ENST00000428153 CCT6AP40227 531 aaKnown RBP19.17■□□□□ 0.66
DDR1-235ENST00000428153 GNL2Q13823 731 aaKnown RBP19.17■□□□□ 0.66
DDR1-235ENST00000428153 PSMD5Q16401 504 aa19.17■□□□□ 0.66
DDR1-235ENST00000428153 UVSSAQ2YD98 709 aa19.17■□□□□ 0.66
DDR1-235ENST00000428153 LIN9Q5TKA1 542 aa19.17■□□□□ 0.66
DDR1-235ENST00000428153 PRSS55Q6UWB4 352 aaPredicted RBP19.17■□□□□ 0.66
DDR1-235ENST00000428153 SPATA31D4Q6ZUB0 917 aa19.17■□□□□ 0.66
DDR1-235ENST00000428153 C4orf32Q8N8J7 132 aa19.17■□□□□ 0.66
DDR1-235ENST00000428153 IGSF22Q8N9C0 903 aa19.17■□□□□ 0.66
DDR1-235ENST00000428153 FAM184AQ8NB25 1140 aa19.17■□□□□ 0.66
DDR1-235ENST00000428153 BHMT2Q9H2M3 363 aa19.17■□□□□ 0.66
DDR1-235ENST00000428153 LAD1O00515 517 aa19.16■□□□□ 0.66
DDR1-235ENST00000428153 RPL17P18621 184 aaKnown RBP19.16■□□□□ 0.66
DDR1-235ENST00000428153 ATF7IP2Q5U623 682 aa19.16■□□□□ 0.66
DDR1-235ENST00000428153 PHLDB3Q6NSJ2 640 aa19.16■□□□□ 0.66
DDR1-235ENST00000428153 PPP1R10Q96QC0 940 aaKnown RBP19.16■□□□□ 0.66
DDR1-235ENST00000428153 SLC2A4RGQ9NR83 387 aa19.16■□□□□ 0.66
DDR1-235ENST00000428153 LRWD1Q9UFC0 647 aa19.16■□□□□ 0.66
DDR1-235ENST00000428153 TNFSF13BQ9Y275 285 aa19.16■□□□□ 0.66
DDR1-235ENST00000428153 GVINP1Q7Z2Y8 2422 aa19.16■□□□□ 0.66
DDR1-235ENST00000428153 PRR23AA6NEV1 266 aa19.15■□□□□ 0.66
DDR1-235ENST00000428153 K7ERI5 159 aa19.15■□□□□ 0.66
DDR1-235ENST00000428153 TRAPPC3O43617 180 aa19.15■□□□□ 0.66
DDR1-235ENST00000428153 PI15O43692 258 aa19.15■□□□□ 0.66
DDR1-235ENST00000428153 NARSO43776 548 aaKnown RBP19.15■□□□□ 0.66
DDR1-235ENST00000428153 XYLBO75191 536 aa19.15■□□□□ 0.66
DDR1-235ENST00000428153 SEC24BO95487 1268 aa19.15■□□□□ 0.66
DDR1-235ENST00000428153 EDN1P05305 212 aa19.15■□□□□ 0.66
DDR1-235ENST00000428153 FGFR3P22607 806 aa19.15■□□□□ 0.66
DDR1-235ENST00000428153 HTR4Q13639 388 aa19.15■□□□□ 0.66
DDR1-235ENST00000428153 RAB33AQ14088 237 aa19.15■□□□□ 0.66
DDR1-235ENST00000428153 ECM1Q16610 540 aa19.15■□□□□ 0.66
DDR1-235ENST00000428153 EEF1DP3Q658K8 133 aa19.15■□□□□ 0.66
DDR1-235ENST00000428153 DCLRE1AQ6PJP8 1040 aa19.15■□□□□ 0.66
DDR1-235ENST00000428153 CEP57Q86XR8 500 aa19.15■□□□□ 0.66
DDR1-235ENST00000428153 GLYCTKQ8IVS8 523 aa19.15■□□□□ 0.66
DDR1-235ENST00000428153 KCTD17Q8N5Z5 321 aa19.15■□□□□ 0.66
DDR1-235ENST00000428153 DTWD2Q8NBA8 298 aa19.15■□□□□ 0.66
DDR1-235ENST00000428153 RABGGTAQ92696 567 aa19.15■□□□□ 0.66
DDR1-235ENST00000428153 TMEM134Q9H6X4 195 aa19.15■□□□□ 0.66
DDR1-235ENST00000428153 C17orf75Q9HAS0 396 aa19.15■□□□□ 0.66
DDR1-235ENST00000428153 TOPORSQ9NS56 1045 aaPredicted RBP19.15■□□□□ 0.66
DDR1-235ENST00000428153 MTRRQ9UBK8 725 aa19.15■□□□□ 0.66
DDR1-235ENST00000428153 KIAA1024Q9UPX6 916 aa19.15■□□□□ 0.66
DDR1-235ENST00000428153 ZNF292O60281 2723 aa19.14■□□□□ 0.65
DDR1-235ENST00000428153 KRBA1A5PL33 1030 aa19.14■□□□□ 0.65
DDR1-235ENST00000428153 C8AP07357 584 aa19.14■□□□□ 0.65
DDR1-235ENST00000428153 CFHP08603 1231 aa19.14■□□□□ 0.65
DDR1-235ENST00000428153 FSHRP23945 695 aa19.14■□□□□ 0.65
DDR1-235ENST00000428153 PRPHP41219 470 aa19.14■□□□□ 0.65
DDR1-235ENST00000428153 XKR4Q5GH76 650 aa19.14■□□□□ 0.65
DDR1-235ENST00000428153 PPM1LQ5SGD2 360 aa19.14■□□□□ 0.65
DDR1-235ENST00000428153 NT5DC1Q5TFE4 455 aa19.14■□□□□ 0.65
DDR1-235ENST00000428153 GET4Q7L5D6 327 aaPredicted RBP19.14■□□□□ 0.65
DDR1-235ENST00000428153 HASPINQ8TF76 798 aa19.14■□□□□ 0.65
DDR1-235ENST00000428153 RSAD2Q8WXG1 361 aa19.14■□□□□ 0.65
DDR1-235ENST00000428153 DDX19AQ9NUU7 478 aaKnown RBP19.14■□□□□ 0.65
DDR1-235ENST00000428153 CACNG4Q9UBN1 327 aa19.14■□□□□ 0.65
DDR1-235ENST00000428153 CDH7Q9ULB5 785 aa19.14■□□□□ 0.65
DDR1-235ENST00000428153 DNM3Q9UQ16 869 aa19.14■□□□□ 0.65
DDR1-235ENST00000428153 GDAQ9Y2T3 454 aa19.14■□□□□ 0.65
DDR1-235ENST00000428153 RBM19Q9Y4C8 960 aaKnown RBP19.14■□□□□ 0.65
DDR1-235ENST00000428153 BACE2Q9Y5Z0 518 aa19.14■□□□□ 0.65
DDR1-235ENST00000428153 VWA8A3KMH1 1905 aa19.13■□□□□ 0.65
DDR1-235ENST00000428153 B3GAT3O94766 335 aa19.13■□□□□ 0.65
DDR1-235ENST00000428153 MYBP10242 640 aa19.13■□□□□ 0.65
DDR1-235ENST00000428153 GRM5P41594 1212 aa19.13■□□□□ 0.65
DDR1-235ENST00000428153 ANGPT1Q15389 498 aa19.13■□□□□ 0.65
DDR1-235ENST00000428153 UPP1Q16831 310 aa19.13■□□□□ 0.65
DDR1-235ENST00000428153 ANKS3Q6ZW76 656 aa19.13■□□□□ 0.65
DDR1-235ENST00000428153 ASCL5Q7RTU5 278 aa19.13■□□□□ 0.65
DDR1-235ENST00000428153 SNX29Q8TEQ0 813 aa19.13■□□□□ 0.65
DDR1-235ENST00000428153 NKD2Q969F2 451 aaPredicted RBP19.13■□□□□ 0.65
DDR1-235ENST00000428153 DDX27Q96GQ7 796 aaKnown RBP19.13■□□□□ 0.65
DDR1-235ENST00000428153 DRC1Q96MC2 740 aa19.13■□□□□ 0.65
DDR1-235ENST00000428153 KIFC3Q9BVG8 833 aa19.13■□□□□ 0.65
DDR1-235ENST00000428153 TIPINQ9BVW5 301 aa19.13■□□□□ 0.65
DDR1-235ENST00000428153 CCDC94Q9BW85 323 aaPredicted RBP19.13■□□□□ 0.65
DDR1-235ENST00000428153 SEMA4AQ9H3S1 761 aa19.13■□□□□ 0.65
DDR1-235ENST00000428153 SLC38A7Q9NVC3 462 aa19.13■□□□□ 0.65
DDR1-235ENST00000428153 ARHGAP28Q9P2N2 729 aa19.13■□□□□ 0.65
DDR1-235ENST00000428153 KCNG1Q9UIX4 513 aa19.13■□□□□ 0.65
DDR1-235ENST00000428153 LIG1P18858 919 aa19.12■□□□□ 0.65
DDR1-235ENST00000428153 YARSP54577 528 aaKnown RBP19.12■□□□□ 0.65
DDR1-235ENST00000428153 PTGDRQ13258 359 aa19.12■□□□□ 0.65
DDR1-235ENST00000428153 DMP1Q13316 513 aaPredicted RBP19.12■□□□□ 0.65
DDR1-235ENST00000428153 KRT79Q5XKE5 535 aa19.12■□□□□ 0.65
DDR1-235ENST00000428153 ALKAL1Q6UXT8 129 aa19.12■□□□□ 0.65
DDR1-235ENST00000428153 MTSS1LQ765P7 747 aa19.12■□□□□ 0.65
DDR1-235ENST00000428153 GRASPQ7Z6J2 395 aaPredicted RBP19.12■□□□□ 0.65
DDR1-235ENST00000428153 GPR152Q8TDT2 470 aa19.12■□□□□ 0.65
DDR1-235ENST00000428153 ACO2Q99798 780 aaKnown RBP19.12■□□□□ 0.65
DDR1-235ENST00000428153 MRPL4Q9BYD3 311 aaKnown RBP19.12■□□□□ 0.65
DDR1-235ENST00000428153 CXCL16Q9H2A7 254 aa19.12■□□□□ 0.65
DDR1-235ENST00000428153 PTPRHQ9HD43 1115 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms