RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 ENPEPQ07075 957 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 NCBP1Q09161 790 aaKnown RBP13.07□□□□□ -0.32
RFC4-206ENST00000427785 NFX1Q12986 1120 aaKnown RBP13.07□□□□□ -0.32
RFC4-206ENST00000427785 PAK2Q13177 524 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 BIRC3Q13489 604 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 LPIN1Q14693 890 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 UBXN11Q5T124 520 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 TDRD10Q5VZ19 366 aaKnown RBP13.07□□□□□ -0.32
RFC4-206ENST00000427785 DPY19L2P1Q6NXN4 242 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 TRIM65Q6PJ69 517 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 TRAF7Q6Q0C0 670 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 APBB1IPQ7Z5R6 666 aaPredicted RBP13.07□□□□□ -0.32
RFC4-206ENST00000427785 CNGA4Q8IV77 575 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 LRRC8AQ8IWT6 810 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 EFCAB13Q8IY85 973 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 TMEM130Q8N3G9 435 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 OR5B17Q8NGF7 314 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 ZNF516Q92618 1163 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 ELMO3Q96BJ8 720 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 NUP58Q9BVL2 599 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 TRIM6Q9C030 488 aaPredicted RBP13.07□□□□□ -0.32
RFC4-206ENST00000427785 MTMR12Q9C0I1 747 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 AGO3Q9H9G7 860 aaKnown RBP13.07□□□□□ -0.32
RFC4-206ENST00000427785 ERVK-5Q9HDB9 667 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 NLRC4Q9NPP4 1024 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 ABHD10Q9NUJ1 306 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 CEP72Q9P209 647 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 ST3GAL5Q9UNP4 418 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 HES2Q9Y543 173 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 MROH7Q68CQ1 1323 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 P4HA2O15460 535 aa13.06□□□□□ -0.32
RFC4-206ENST00000427785 GTF2H1P32780 548 aa13.06□□□□□ -0.32
RFC4-206ENST00000427785 KRT9P35527 623 aa13.06□□□□□ -0.32
RFC4-206ENST00000427785 MCCD1P59942 119 aaPredicted RBP13.06□□□□□ -0.32
RFC4-206ENST00000427785 MBTPS1Q14703 1052 aa13.06□□□□□ -0.32
RFC4-206ENST00000427785 TRIM60Q495X7 471 aa13.06□□□□□ -0.32
RFC4-206ENST00000427785 FIGNQ5HY92 759 aa13.06□□□□□ -0.32
RFC4-206ENST00000427785 FAM26DQ5JW98 314 aa13.06□□□□□ -0.32
RFC4-206ENST00000427785 E4F1Q66K89 784 aaPredicted RBP13.06□□□□□ -0.32
RFC4-206ENST00000427785 KRT39Q6A163 491 aa13.06□□□□□ -0.32
RFC4-206ENST00000427785 TWF2Q6IBS0 349 aaKnown RBP13.06□□□□□ -0.32
RFC4-206ENST00000427785 PDXDC1Q6P996 788 aa13.06□□□□□ -0.32
RFC4-206ENST00000427785 SV2AQ7L0J3 742 aa13.06□□□□□ -0.32
RFC4-206ENST00000427785 WDR49Q8IV35 697 aa13.06□□□□□ -0.32
RFC4-206ENST00000427785 TAS1R2Q8TE23 839 aa13.06□□□□□ -0.32
RFC4-206ENST00000427785 SEMA4DQ92854 862 aa13.06□□□□□ -0.32
RFC4-206ENST00000427785 CCDC51Q96ER9 411 aa13.06□□□□□ -0.32
RFC4-206ENST00000427785 CCDC94Q9BW85 323 aaPredicted RBP13.06□□□□□ -0.32
RFC4-206ENST00000427785 SNTG2Q9NY99 539 aa13.06□□□□□ -0.32
RFC4-206ENST00000427785 PYCARDQ9ULZ3 195 aa13.06□□□□□ -0.32
RFC4-206ENST00000427785 CAPN11Q9UMQ6 739 aa13.06□□□□□ -0.32
RFC4-206ENST00000427785 LUC7L2Q9Y383 392 aaKnown RBP13.06□□□□□ -0.32
RFC4-206ENST00000427785 BRCA2P51587 3418 aa13.06□□□□□ -0.32
RFC4-206ENST00000427785 LTBP2Q14767 1821 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 A0A1W2PQJ5 194 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 LRRC53A6NM62 1247 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 LACTBL1A8MY62 500 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 RECQL4O94761 1208 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 CLSTN1O94985 981 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 IL18RAPO95256 599 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 VNN1O95497 513 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 CD4P01730 458 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 HLA-DRAP01903 254 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 TMEM191BP0C7N4 346 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 IBSPP21815 317 aaPredicted RBP13.05□□□□□ -0.32
RFC4-206ENST00000427785 GJA8P48165 433 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 CLDN10P78369 228 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 TFAMQ00059 246 aaKnown RBP13.05□□□□□ -0.32
RFC4-206ENST00000427785 RAPGEF1Q13905 1077 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 KYAT1Q16773 422 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 ZACNQ401N2 412 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 HS1BP3Q53T59 392 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 KLHDC7AQ5VTJ3 777 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 JADE1Q6IE81 842 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 IQCEQ6IPM2 695 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 SLC39A5Q6ZMH5 540 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 C15orf39Q6ZRI6 1047 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 LRRC8DQ7L1W4 858 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 CACNA2D4Q7Z3S7 1137 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 TMEM139Q8IV31 216 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 ARHGEF19Q8IW93 802 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 LMO3Q8TAP4 145 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 CAGE1Q8TC20 777 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 BAP1Q92560 729 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 IQCDQ96DY2 449 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 SNX27Q96L92 541 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 ACAP3Q96P50 834 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 PANX2Q96RD6 677 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 PI4K2AQ9BTU6 479 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 MCOLN1Q9GZU1 580 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 PLCB1Q9NQ66 1216 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 PADI3Q9ULW8 664 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 UMODL1Q5DID0 1318 aa13.05□□□□□ -0.32
RFC4-206ENST00000427785 GPR182O15218 404 aa13.04□□□□□ -0.32
RFC4-206ENST00000427785 TLR3O15455 904 aaKnown RBP13.04□□□□□ -0.32
RFC4-206ENST00000427785 MGEA5O60502 916 aa13.04□□□□□ -0.32
RFC4-206ENST00000427785 C4BPAP04003 597 aaKnown RBP13.04□□□□□ -0.32
RFC4-206ENST00000427785 PNMA6AP0CW24 399 aaPredicted RBP13.04□□□□□ -0.32
RFC4-206ENST00000427785 COL6A1P12109 1028 aa13.04□□□□□ -0.32
RFC4-206ENST00000427785 UCHL3P15374 230 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms