RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 GCKP35557 465 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 ALCAMQ13740 583 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 SNCBQ16143 134 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 HAUS6Q7Z4H7 955 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 KAT2BQ92831 832 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 DEFB129Q9H1M3 183 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 RNF17Q9BXT8 1623 aaKnown RBP13.92□□□□□ -0.18
SPG11-202ENST00000427534 TNS3Q68CZ2 1445 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 ITIH6Q6UXX5 1313 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 TTI1O43156 1089 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 PPP1R2P3Q6NXS1 205 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 ELMO2Q96JJ3 720 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 PBKQ96KB5 322 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 MCEEQ96PE7 176 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 BARHL2Q9NY43 387 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 ARHGAP10A1A4S6 786 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 TLR2O60603 784 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 NFKBIAP25963 317 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 BTKQ06187 659 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 GTF2H3Q13889 308 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 TMEM132DQ14C87 1099 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 SPATS2Q86XZ4 545 aaKnown RBP13.92□□□□□ -0.18
SPG11-202ENST00000427534 C2orf40Q9H1Z8 148 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 CACNA2D2Q9NY47 1150 aa13.92□□□□□ -0.18
SPG11-202ENST00000427534 TULP4Q9NRJ4 1543 aa13.91□□□□□ -0.18
SPG11-202ENST00000427534 SH3TC2Q8TF17 1288 aa13.91□□□□□ -0.18
SPG11-202ENST00000427534 PQBP1O60828 265 aaKnown RBP13.91□□□□□ -0.18
SPG11-202ENST00000427534 SNX31Q8N9S9 440 aa13.91□□□□□ -0.18
SPG11-202ENST00000427534 PARD6BQ9BYG5 372 aa13.91□□□□□ -0.18
SPG11-202ENST00000427534 SHCBP1LQ9BZQ2 653 aa13.91□□□□□ -0.18
SPG11-202ENST00000427534 ABCB6Q9NP58 842 aa13.91□□□□□ -0.18
SPG11-202ENST00000427534 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.91□□□□□ -0.18
SPG11-202ENST00000427534 STAP1Q9ULZ2 295 aa13.91□□□□□ -0.18
SPG11-202ENST00000427534 APOL1O14791 398 aa13.91□□□□□ -0.18
SPG11-202ENST00000427534 RGL2O15211 777 aa13.91□□□□□ -0.18
SPG11-202ENST00000427534 ARIH2O95376 493 aa13.91□□□□□ -0.18
SPG11-202ENST00000427534 MAP4P27816 1152 aaKnown RBP13.91□□□□□ -0.18
SPG11-202ENST00000427534 MAPK9P45984 424 aa13.91□□□□□ -0.18
SPG11-202ENST00000427534 RBM41Q96IZ5 413 aaKnown RBP13.91□□□□□ -0.18
SPG11-202ENST00000427534 HSPBP1Q9NZL4 362 aa13.91□□□□□ -0.18
SPG11-202ENST00000427534 C6orf203Q9P0P8 240 aaPredicted RBP13.91□□□□□ -0.18
SPG11-202ENST00000427534 NBPF26B4DH59 902 aa13.91□□□□□ -0.18
SPG11-202ENST00000427534 ARL4CP56559 192 aa13.91□□□□□ -0.18
SPG11-202ENST00000427534 NBPF10Q6P3W6 841 aaKnown RBP13.91□□□□□ -0.18
SPG11-202ENST00000427534 NBPF15Q8N660 670 aa13.91□□□□□ -0.18
SPG11-202ENST00000427534 DDX47Q9H0S4 455 aaKnown RBP13.91□□□□□ -0.18
SPG11-202ENST00000427534 LRG1P02750 347 aa13.91□□□□□ -0.18
SPG11-202ENST00000427534 AVPR1AP37288 418 aa13.91□□□□□ -0.18
SPG11-202ENST00000427534 MFN1Q8IWA4 741 aa13.91□□□□□ -0.18
SPG11-202ENST00000427534 OSBPL5Q9H0X9 879 aaPredicted RBP13.91□□□□□ -0.18
SPG11-202ENST00000427534 TEKT2Q9UIF3 430 aa13.91□□□□□ -0.18
SPG11-202ENST00000427534 TTLL13PA6NNM8 815 aa13.9□□□□□ -0.18
SPG11-202ENST00000427534 TEX33O43247 280 aa13.9□□□□□ -0.18
SPG11-202ENST00000427534 NDUFB5O43674 189 aa13.9□□□□□ -0.18
SPG11-202ENST00000427534 GH1P01241 217 aa13.9□□□□□ -0.18
SPG11-202ENST00000427534 ZNF286BP0CG31 522 aa13.9□□□□□ -0.18
SPG11-202ENST00000427534 DUOXA2Q1HG44 320 aa13.9□□□□□ -0.18
SPG11-202ENST00000427534 C2CD6Q53TS8 623 aa13.9□□□□□ -0.18
SPG11-202ENST00000427534 FMR1NBQ8N0W7 255 aaPredicted RBP13.9□□□□□ -0.18
SPG11-202ENST00000427534 ATG4CQ96DT6 458 aa13.9□□□□□ -0.18
SPG11-202ENST00000427534 LRRC7Q96NW7 1537 aa13.9□□□□□ -0.18
SPG11-202ENST00000427534 CYP2C9P11712 490 aa13.9□□□□□ -0.18
SPG11-202ENST00000427534 CDK17Q00537 523 aa13.9□□□□□ -0.18
SPG11-202ENST00000427534 EPM2AIP1Q7L775 607 aaPredicted RBP13.9□□□□□ -0.18
SPG11-202ENST00000427534 FBXO16Q8IX29 292 aaPredicted RBP13.9□□□□□ -0.18
SPG11-202ENST00000427534 ALDH8A1Q9H2A2 487 aaPredicted RBP13.9□□□□□ -0.18
SPG11-202ENST00000427534 MED14O60244 1454 aa13.9□□□□□ -0.18
SPG11-202ENST00000427534 NDUFB10O96000 172 aa13.9□□□□□ -0.18
SPG11-202ENST00000427534 BZW1Q7L1Q6 419 aaKnown RBP13.9□□□□□ -0.18
SPG11-202ENST00000427534 TBC1D1Q86TI0 1168 aaPredicted RBP13.9□□□□□ -0.18
SPG11-202ENST00000427534 NEK9Q8TD19 979 aa13.9□□□□□ -0.18
SPG11-202ENST00000427534 FBXO28Q9NVF7 368 aa13.9□□□□□ -0.18
SPG11-202ENST00000427534 KRT14P02533 472 aa13.9□□□□□ -0.18
SPG11-202ENST00000427534 EEF1DP29692 281 aaKnown RBP13.9□□□□□ -0.18
SPG11-202ENST00000427534 BEND6Q5SZJ8 279 aaPredicted RBP13.9□□□□□ -0.18
SPG11-202ENST00000427534 YME1L1Q96TA2 773 aa13.9□□□□□ -0.18
SPG11-202ENST00000427534 UNC13BO14795 1591 aa13.9□□□□□ -0.18
SPG11-202ENST00000427534 NRKQ7Z2Y5 1582 aa13.9□□□□□ -0.18
SPG11-202ENST00000427534 RAP1GAPP47736 663 aa13.9□□□□□ -0.18
SPG11-202ENST00000427534 ALDH1A3P47895 512 aa13.9□□□□□ -0.18
SPG11-202ENST00000427534 PKN3Q6P5Z2 889 aa13.9□□□□□ -0.18
SPG11-202ENST00000427534 GPRC5AQ8NFJ5 357 aa13.9□□□□□ -0.18
SPG11-202ENST00000427534 TAAR1Q96RJ0 339 aa13.9□□□□□ -0.18
SPG11-202ENST00000427534 ZNF185O15231 689 aa13.9□□□□□ -0.19
SPG11-202ENST00000427534 KLK7P49862 253 aa13.9□□□□□ -0.19
SPG11-202ENST00000427534 PRKCEQ02156 737 aa13.9□□□□□ -0.19
SPG11-202ENST00000427534 DCAF6Q58WW2 860 aa13.9□□□□□ -0.19
SPG11-202ENST00000427534 GJB7Q6PEY0 223 aa13.9□□□□□ -0.19
SPG11-202ENST00000427534 NAGPAQ9UK23 515 aa13.9□□□□□ -0.19
SPG11-202ENST00000427534 GTPBP10A4D1E9 387 aaKnown RBP13.89□□□□□ -0.19
SPG11-202ENST00000427534 ARSEP51690 589 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 TMED1Q13445 227 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 NCAPHQ15003 741 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 GOLGA7BQ2TAP0 167 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 NUDT12Q9BQG2 462 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 IL1RL2Q9HB29 575 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 LSM7Q9UK45 103 aaKnown RBP13.89□□□□□ -0.19
SPG11-202ENST00000427534 GRIN3BO60391 1043 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 GFAPP14136 432 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 SFNP31947 248 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms