RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 CMASQ8NFW8 434 aaPredicted RBP11.16□□□□□ -0.62
COMMD1-202ENST00000427417 RIN2Q8WYP3 895 aaPredicted RBP11.16□□□□□ -0.62
COMMD1-202ENST00000427417 B3GALT6Q96L58 329 aa11.16□□□□□ -0.62
COMMD1-202ENST00000427417 TTPALQ9BTX7 342 aa11.16□□□□□ -0.62
COMMD1-202ENST00000427417 RHOBTB2Q9BYZ6 727 aa11.16□□□□□ -0.62
COMMD1-202ENST00000427417 CDT1Q9H211 546 aa11.16□□□□□ -0.62
COMMD1-202ENST00000427417 PLEKHA4Q9H4M7 779 aa11.16□□□□□ -0.62
COMMD1-202ENST00000427417 PTPRHQ9HD43 1115 aa11.16□□□□□ -0.62
COMMD1-202ENST00000427417 SLC38A7Q9NVC3 462 aa11.16□□□□□ -0.62
COMMD1-202ENST00000427417 ODF2LQ9ULJ1 636 aa11.16□□□□□ -0.62
COMMD1-202ENST00000427417 PLXNA3P51805 1871 aa11.16□□□□□ -0.62
COMMD1-202ENST00000427417 MYO10Q9HD67 2058 aa11.16□□□□□ -0.62
COMMD1-202ENST00000427417 C2orf16Q68DN1 1984 aa11.16□□□□□ -0.62
COMMD1-202ENST00000427417 SFI1A8K8P3 1242 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 C2CD4DB7Z1M9 353 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 TMEM189-UBE2V1I3L0A0 370 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 TRAPPC3O43617 180 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 TOM1L1O75674 476 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 KIF4AO95239 1232 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 BRD1O95696 1058 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 PROZP22891 400 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 ABCD1P33897 745 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 SIGLEC14Q08ET2 396 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 NAB2Q15742 525 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 FAM171A1Q5VUB5 890 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 DCLRE1AQ6PJP8 1040 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 ZPBP2Q6X784 338 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 TRIM67Q6ZTA4 783 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 OTOP3Q7RTS5 596 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 TAS1R3Q7RTX0 852 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 BMP8AQ7Z5Y6 402 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 ZDHHC14Q8IZN3 488 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 TMEM161BQ8NDZ6 487 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 HASPINQ8TF76 798 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 DDX27Q96GQ7 796 aaKnown RBP11.15□□□□□ -0.62
COMMD1-202ENST00000427417 ACAP3Q96P50 834 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 PPP1R10Q96QC0 940 aaKnown RBP11.15□□□□□ -0.62
COMMD1-202ENST00000427417 PAAF1Q9BRP4 392 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 TARS2Q9BW92 718 aaKnown RBP11.15□□□□□ -0.62
COMMD1-202ENST00000427417 KCNH6Q9H252 994 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 CXCL16Q9H2A7 254 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 SMOC2Q9H3U7 446 aa11.15□□□□□ -0.62
COMMD1-202ENST00000427417 SMIM28A0A1B0GU29 152 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 CCDC195A0A1B0GUA6 201 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 TMEM221A6NGB7 291 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 K7ELQ4 463 aaPredicted RBP11.14□□□□□ -0.63
COMMD1-202ENST00000427417 M0R296 226 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 CLDN3O15551 220 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 TGM5O43548 720 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 B3GAT3O94766 335 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 KRT18P05783 430 aaKnown RBP11.14□□□□□ -0.63
COMMD1-202ENST00000427417 MAPTP10636 758 aaKnown RBP11.14□□□□□ -0.63
COMMD1-202ENST00000427417 SYT1P21579 422 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 TXLNAP40222 546 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 NCKAP1LP55160 1127 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 OSTNP61366 133 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 MTMR3Q13615 1198 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 NOLC1Q14978 699 aaKnown RBP eCLIP11.14□□□□□ -0.63
COMMD1-202ENST00000427417 XKR4Q5GH76 650 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 GLRA4Q5JXX5 417 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.14□□□□□ -0.63
COMMD1-202ENST00000427417 CEP57Q86XR8 500 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 PALB2Q86YC2 1186 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 UBALD2Q8IYN6 164 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 CEP120Q8N960 986 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 PIK3R5Q8WYR1 880 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 STAMQ92783 540 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 KCNN1Q92952 543 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 PBXIP1Q96AQ6 731 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 CCSER1Q9C0I3 900 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 PARVGQ9HBI0 331 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 ZDHHC7Q9NXF8 308 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 ANKFY1Q9P2R3 1169 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 CCDC39Q9UFE4 941 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 SORCS3Q9UPU3 1222 aa11.14□□□□□ -0.63
COMMD1-202ENST00000427417 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.14□□□□□ -0.63
COMMD1-202ENST00000427417 DENND4AQ7Z401 1863 aa11.13□□□□□ -0.63
COMMD1-202ENST00000427417 TBCAO75347 108 aaKnown RBP11.13□□□□□ -0.63
COMMD1-202ENST00000427417 FAM13AO94988 1023 aa11.13□□□□□ -0.63
COMMD1-202ENST00000427417 ASGR2P07307 311 aa11.13□□□□□ -0.63
COMMD1-202ENST00000427417 HARSP12081 509 aaKnown RBP11.13□□□□□ -0.63
COMMD1-202ENST00000427417 KCNE1P15382 129 aa11.13□□□□□ -0.63
COMMD1-202ENST00000427417 PLCG1P19174 1290 aa11.13□□□□□ -0.63
COMMD1-202ENST00000427417 MATR3P43243 847 aaKnown RBP eCLIP11.13□□□□□ -0.636e-6■■□□□ 12.4
COMMD1-202ENST00000427417 CLCNKBP51801 687 aa11.13□□□□□ -0.63
COMMD1-202ENST00000427417 KARSQ15046 597 aaKnown RBP11.13□□□□□ -0.63
COMMD1-202ENST00000427417 PSMD5Q16401 504 aa11.13□□□□□ -0.63
COMMD1-202ENST00000427417 KYAT1Q16773 422 aa11.13□□□□□ -0.63
COMMD1-202ENST00000427417 UPP1Q16831 310 aa11.13□□□□□ -0.63
COMMD1-202ENST00000427417 ARSHQ5FYA8 562 aa11.13□□□□□ -0.63
COMMD1-202ENST00000427417 RTP2Q5QGT7 225 aa11.13□□□□□ -0.63
COMMD1-202ENST00000427417 ALKAL1Q6UXT8 129 aa11.13□□□□□ -0.63
COMMD1-202ENST00000427417 GPBP1Q86WP2 473 aa11.13□□□□□ -0.63
COMMD1-202ENST00000427417 GLYCTKQ8IVS8 523 aa11.13□□□□□ -0.63
COMMD1-202ENST00000427417 SUGP1Q8IWZ8 645 aaKnown RBP11.13□□□□□ -0.63
COMMD1-202ENST00000427417 MYCT1Q8N699 235 aa11.13□□□□□ -0.63
COMMD1-202ENST00000427417 KREMEN2Q8NCW0 462 aa11.13□□□□□ -0.63
COMMD1-202ENST00000427417 LNX1Q8TBB1 728 aaPredicted RBP11.13□□□□□ -0.63
COMMD1-202ENST00000427417 LARP4BQ92615 738 aaKnown RBP11.13□□□□□ -0.63
COMMD1-202ENST00000427417 RAD54LQ92698 747 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms