RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 KCNJ6P48051 423 aa8.14□□□□□ -1.11
LINC01049-201ENST00000426840 SARSP49591 514 aaKnown RBP8.14□□□□□ -1.11
LINC01049-201ENST00000426840 ASIC1P78348 528 aa8.14□□□□□ -1.11
LINC01049-201ENST00000426840 HTRA4P83105 476 aaPredicted RBP8.14□□□□□ -1.11
LINC01049-201ENST00000426840 COASYQ13057 564 aa8.14□□□□□ -1.11
LINC01049-201ENST00000426840 PRPF4BQ13523 1007 aaKnown RBP8.14□□□□□ -1.11
LINC01049-201ENST00000426840 EEF1DP3Q658K8 133 aa8.14□□□□□ -1.11
LINC01049-201ENST00000426840 KANK3Q6NY19 840 aa8.14□□□□□ -1.11
LINC01049-201ENST00000426840 CDR2LQ86X02 465 aaPredicted RBP8.14□□□□□ -1.11
LINC01049-201ENST00000426840 ECHDC2Q86YB7 292 aa8.14□□□□□ -1.11
LINC01049-201ENST00000426840 HERC6Q8IVU3 1022 aa8.14□□□□□ -1.11
LINC01049-201ENST00000426840 FAM178BQ8IXR5 827 aa8.14□□□□□ -1.11
LINC01049-201ENST00000426840 ELOA2Q8IYF1 753 aaPredicted RBP8.14□□□□□ -1.11
LINC01049-201ENST00000426840 MYOCDQ8IZQ8 938 aa8.14□□□□□ -1.11
LINC01049-201ENST00000426840 HPS3Q969F9 1004 aa8.14□□□□□ -1.11
LINC01049-201ENST00000426840 GBP4Q96PP9 640 aa8.14□□□□□ -1.11
LINC01049-201ENST00000426840 SLC9A7Q96T83 725 aa8.14□□□□□ -1.11
LINC01049-201ENST00000426840 ACO2Q99798 780 aaKnown RBP8.14□□□□□ -1.11
LINC01049-201ENST00000426840 EIF2AQ9BY44 585 aaKnown RBP8.14□□□□□ -1.11
LINC01049-201ENST00000426840 FGFBP2Q9BYJ0 223 aa8.14□□□□□ -1.11
LINC01049-201ENST00000426840 ELAC1Q9H777 363 aaKnown RBP8.14□□□□□ -1.11
LINC01049-201ENST00000426840 PTPRHQ9HD43 1115 aa8.14□□□□□ -1.11
LINC01049-201ENST00000426840 OLFML3Q9NRN5 406 aa8.14□□□□□ -1.11
LINC01049-201ENST00000426840 RNF19AQ9NV58 838 aa8.14□□□□□ -1.11
LINC01049-201ENST00000426840 DACT1Q9NYF0 836 aa8.14□□□□□ -1.11
LINC01049-201ENST00000426840 TBC1D7Q9P0N9 293 aa8.14□□□□□ -1.11
LINC01049-201ENST00000426840 TBX20Q9UMR3 447 aa8.14□□□□□ -1.11
LINC01049-201ENST00000426840 PIN4Q9Y237 131 aaKnown RBP8.14□□□□□ -1.11
LINC01049-201ENST00000426840 TNFSF13BQ9Y275 285 aa8.14□□□□□ -1.11
LINC01049-201ENST00000426840 TRIOBPQ9H2D6 2365 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 PHLPP2Q6ZVD8 1323 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 CNTNAP2Q9UHC6 1331 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 H0YCG3 227 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 ABLIM1O14639 778 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 LILRA1O75019 489 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 DGKIO75912 1065 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 GJB5O95377 273 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 EOMESO95936 686 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 PIGRP01833 764 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 RPN1P04843 607 aaKnown RBP8.13□□□□□ -1.11
LINC01049-201ENST00000426840 MYBP10242 640 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 SCP2P22307 547 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 PROZP22891 400 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 CASP5P51878 434 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 RABGGTBP53611 331 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 MCCD1P59942 119 aaPredicted RBP8.13□□□□□ -1.11
LINC01049-201ENST00000426840 SMAD3P84022 425 aaKnown RBP8.13□□□□□ -1.11
LINC01049-201ENST00000426840 NCBP1Q09161 790 aaKnown RBP8.13□□□□□ -1.11
LINC01049-201ENST00000426840 KCNA1Q09470 495 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 HABP4Q5JVS0 413 aaKnown RBP8.13□□□□□ -1.11
LINC01049-201ENST00000426840 TWF2Q6IBS0 349 aaKnown RBP8.13□□□□□ -1.11
LINC01049-201ENST00000426840 FAM117BQ6P1L5 589 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 NOTUMQ6P988 496 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 ZPBP2Q6X784 338 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 Q6ZVU0 165 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 EPM2AIP1Q7L775 607 aaPredicted RBP8.13□□□□□ -1.11
LINC01049-201ENST00000426840 NPAS4Q8IUM7 802 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 SMG8Q8ND04 991 aaKnown RBP8.13□□□□□ -1.11
LINC01049-201ENST00000426840 SLC17A8Q8NDX2 589 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 GLIS3Q8NEA6 775 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 SPATA20Q8TB22 786 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 ZNF507Q8TCN5 953 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 ZNF689Q96CS4 500 aaPredicted RBP8.13□□□□□ -1.11
LINC01049-201ENST00000426840 CCDC51Q96ER9 411 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 ZBTB45Q96K62 511 aaPredicted RBP8.13□□□□□ -1.11
LINC01049-201ENST00000426840 RAD9AQ99638 391 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 TARS2Q9BW92 718 aaKnown RBP8.13□□□□□ -1.11
LINC01049-201ENST00000426840 IKZF4Q9H2S9 585 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 PDZD7Q9H5P4 517 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 ZNF395Q9H8N7 513 aaPredicted RBP8.13□□□□□ -1.11
LINC01049-201ENST00000426840 MRPL44Q9H9J2 332 aaKnown RBP8.13□□□□□ -1.11
LINC01049-201ENST00000426840 FAM105AQ9NUU6 356 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 TMEM161AQ9NX61 479 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 PCDHB7Q9Y5E2 793 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 PCDHB2Q9Y5E7 798 aa8.13□□□□□ -1.11
LINC01049-201ENST00000426840 MEIS3P2A8K0S8 358 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 ANKRD63C9JTQ0 380 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 K7ENM7 598 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 SOX1O00570 391 aaPredicted RBP8.12□□□□□ -1.11
LINC01049-201ENST00000426840 N4BP3O15049 544 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 PRPF6O94906 941 aaKnown RBP8.12□□□□□ -1.11
LINC01049-201ENST00000426840 RHOBTB3O94955 611 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 NPTXRO95502 500 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 STAG3L1P0CL83 205 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 FGFR1P11362 822 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 SKIP12755 728 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 MYOGP15173 224 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 ABCD1P33897 745 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 HOXD13P35453 343 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 GATMP50440 423 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 STRN3Q13033 797 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 STK4Q13043 487 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 PSMD2Q13200 908 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 PNOCQ13519 176 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 POSTNQ15063 836 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 FAM26FQ5R3K3 315 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 L1TD1Q5T7N2 865 aaKnown RBP8.12□□□□□ -1.11
LINC01049-201ENST00000426840 ATF7IP2Q5U623 682 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 SLC39A4Q6P5W5 647 aa8.12□□□□□ -1.11
LINC01049-201ENST00000426840 SLC27A1Q6PCB7 646 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms