RNA–Protein interactions for RNA: ENST00000426530.2

PTPMT1-203, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-203ENST00000426530 CDK5RAP3Q96JB5 506 aa27.42■■□□□ 1.98
PTPMT1-203ENST00000426530 TMEM134Q9H6X4 195 aa27.42■■□□□ 1.98
PTPMT1-203ENST00000426530 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.42■■□□□ 1.98
PTPMT1-203ENST00000426530 USTQ9Y2C2 406 aa27.42■■□□□ 1.98
PTPMT1-203ENST00000426530 GUCY2CP25092 1073 aa27.41■■□□□ 1.98
PTPMT1-203ENST00000426530 SLC12A3P55017 1021 aa27.41■■□□□ 1.98
PTPMT1-203ENST00000426530 TMEM119Q4V9L6 283 aa27.41■■□□□ 1.98
PTPMT1-203ENST00000426530 FBXL6Q8N531 539 aa27.41■■□□□ 1.98
PTPMT1-203ENST00000426530 PPP1R10Q96QC0 940 aaKnown RBP27.41■■□□□ 1.98
PTPMT1-203ENST00000426530 TTPALQ9BTX7 342 aa27.41■■□□□ 1.98
PTPMT1-203ENST00000426530 NT5C3AQ9H0P0 336 aa27.41■■□□□ 1.98
PTPMT1-203ENST00000426530 PTPRHQ9HD43 1115 aa27.41■■□□□ 1.98
PTPMT1-203ENST00000426530 FNIP2Q9P278 1114 aa27.41■■□□□ 1.98
PTPMT1-203ENST00000426530 CITO14578 2027 aa27.4■■□□□ 1.98
PTPMT1-203ENST00000426530 PLA2G4BP0C869 781 aa27.4■■□□□ 1.98
PTPMT1-203ENST00000426530 GRM5P41594 1212 aa27.4■■□□□ 1.98
PTPMT1-203ENST00000426530 CLCNKBP51801 687 aa27.4■■□□□ 1.98
PTPMT1-203ENST00000426530 GRIN1Q05586 938 aa27.4■■□□□ 1.98
PTPMT1-203ENST00000426530 IER5LQ5T953 404 aa27.4■■□□□ 1.98
PTPMT1-203ENST00000426530 ARL6IP4Q66PJ3 421 aaKnown RBP27.4■■□□□ 1.98
PTPMT1-203ENST00000426530 APBB1IPQ7Z5R6 666 aaPredicted RBP27.4■■□□□ 1.98
PTPMT1-203ENST00000426530 SYT2Q8N9I0 419 aaPredicted RBP27.4■■□□□ 1.98
PTPMT1-203ENST00000426530 CMASQ8NFW8 434 aaPredicted RBP27.4■■□□□ 1.98
PTPMT1-203ENST00000426530 LRRC15Q8TF66 581 aa27.4■■□□□ 1.98
PTPMT1-203ENST00000426530 SMG7Q92540 1137 aaKnown RBP27.4■■□□□ 1.98
PTPMT1-203ENST00000426530 ZNF707Q96C28 371 aaPredicted RBP27.4■■□□□ 1.98
PTPMT1-203ENST00000426530 VPS37CA5D8V6 355 aaPredicted RBP27.39■■□□□ 1.98
PTPMT1-203ENST00000426530 VCPP55072 806 aaKnown RBP27.39■■□□□ 1.98
PTPMT1-203ENST00000426530 SOX4Q06945 474 aaPredicted RBP27.39■■□□□ 1.98
PTPMT1-203ENST00000426530 PSMD5Q16401 504 aa27.39■■□□□ 1.98
PTPMT1-203ENST00000426530 LILRA6Q6PI73 481 aa27.39■■□□□ 1.98
PTPMT1-203ENST00000426530 ELMSAN1Q6PJG2 1045 aa27.39■■□□□ 1.98
PTPMT1-203ENST00000426530 PLCD3Q8N3E9 789 aa27.39■■□□□ 1.98
PTPMT1-203ENST00000426530 LNX1Q8TBB1 728 aaPredicted RBP27.39■■□□□ 1.98
PTPMT1-203ENST00000426530 ACSF2Q96CM8 615 aaPredicted RBP27.39■■□□□ 1.98
PTPMT1-203ENST00000426530 ZBTB45Q96K62 511 aaPredicted RBP27.39■■□□□ 1.98
PTPMT1-203ENST00000426530 TCHPQ9BT92 498 aa27.39■■□□□ 1.98
PTPMT1-203ENST00000426530 CCDC94Q9BW85 323 aaPredicted RBP27.39■■□□□ 1.98
PTPMT1-203ENST00000426530 ABLIM1O14639 778 aa27.38■■□□□ 1.97
PTPMT1-203ENST00000426530 ADAM12O43184 909 aa27.38■■□□□ 1.97
PTPMT1-203ENST00000426530 N4BP1O75113 896 aaKnown RBP27.38■■□□□ 1.97
PTPMT1-203ENST00000426530 PLS3P13797 630 aa27.38■■□□□ 1.97
PTPMT1-203ENST00000426530 YARSP54577 528 aaKnown RBP27.38■■□□□ 1.97
PTPMT1-203ENST00000426530 OTOP3Q7RTS5 596 aa27.38■■□□□ 1.97
PTPMT1-203ENST00000426530 GPR65Q8IYL9 337 aa27.38■■□□□ 1.97
PTPMT1-203ENST00000426530 PIK3R5Q8WYR1 880 aa27.38■■□□□ 1.97
PTPMT1-203ENST00000426530 CLSTN3Q9BQT9 956 aa27.38■■□□□ 1.97
PTPMT1-203ENST00000426530 TIPINQ9BVW5 301 aa27.38■■□□□ 1.97
PTPMT1-203ENST00000426530 C17orf75Q9HAS0 396 aa27.38■■□□□ 1.97
PTPMT1-203ENST00000426530 ANKFY1Q9P2R3 1169 aa27.38■■□□□ 1.97
PTPMT1-203ENST00000426530 DPP7Q9UHL4 492 aa27.38■■□□□ 1.97
PTPMT1-203ENST00000426530 RBM19Q9Y4C8 960 aaKnown RBP27.38■■□□□ 1.97
PTPMT1-203ENST00000426530 CLUHO75153 1309 aa27.38■■□□□ 1.97
PTPMT1-203ENST00000426530 SMIM28A0A1B0GU29 152 aa27.37■■□□□ 1.97
PTPMT1-203ENST00000426530 I3L4J1 428 aa27.37■■□□□ 1.97
PTPMT1-203ENST00000426530 B3GAT3O94766 335 aa27.37■■□□□ 1.97
PTPMT1-203ENST00000426530 PROZP22891 400 aa27.37■■□□□ 1.97
PTPMT1-203ENST00000426530 CREMQ03060 361 aa27.37■■□□□ 1.97
PTPMT1-203ENST00000426530 DHX8Q14562 1220 aaKnown RBP27.37■■□□□ 1.97
PTPMT1-203ENST00000426530 SEZ6Q53EL9 994 aa27.37■■□□□ 1.97
PTPMT1-203ENST00000426530 ARSHQ5FYA8 562 aa27.37■■□□□ 1.97
PTPMT1-203ENST00000426530 MPZL3Q6UWV2 235 aa27.37■■□□□ 1.97
PTPMT1-203ENST00000426530 UBALD2Q8IYN6 164 aa27.37■■□□□ 1.97
PTPMT1-203ENST00000426530 C3orf58Q8NDZ4 430 aa27.37■■□□□ 1.97
PTPMT1-203ENST00000426530 TMEM161BQ8NDZ6 487 aa27.37■■□□□ 1.97
PTPMT1-203ENST00000426530 PRSS33Q8NF86 280 aa27.37■■□□□ 1.97
PTPMT1-203ENST00000426530 DOCK6Q96HP0 2047 aa27.37■■□□□ 1.97
PTPMT1-203ENST00000426530 ZMAT2Q96NC0 199 aaKnown RBP27.37■■□□□ 1.97
PTPMT1-203ENST00000426530 PLEKHA4Q9H4M7 779 aa27.37■■□□□ 1.97
PTPMT1-203ENST00000426530 PIDD1Q9HB75 910 aa27.37■■□□□ 1.97
PTPMT1-203ENST00000426530 PDCD11Q14690 1871 aaKnown RBP27.36■■□□□ 1.97
PTPMT1-203ENST00000426530 DOCK8Q8NF50 2099 aa27.36■■□□□ 1.97
PTPMT1-203ENST00000426530 MEFVO15553 781 aaPredicted RBP27.36■■□□□ 1.97
PTPMT1-203ENST00000426530 MCF2P10911 925 aa27.36■■□□□ 1.97
PTPMT1-203ENST00000426530 HOXD11P31277 338 aaPredicted RBP27.36■■□□□ 1.97
PTPMT1-203ENST00000426530 NHLH1Q02575 133 aa27.36■■□□□ 1.97
PTPMT1-203ENST00000426530 CUL4AQ13619 759 aa27.36■■□□□ 1.97
PTPMT1-203ENST00000426530 SF3A1Q15459 793 aaKnown RBP27.36■■□□□ 1.97
PTPMT1-203ENST00000426530 CD300LGQ6UXG3 332 aa27.36■■□□□ 1.97
PTPMT1-203ENST00000426530 HDAC7Q8WUI4 952 aa27.36■■□□□ 1.97
PTPMT1-203ENST00000426530 SPIRE2Q8WWL2 714 aa27.36■■□□□ 1.97
PTPMT1-203ENST00000426530 SNX27Q96L92 541 aa27.36■■□□□ 1.97
PTPMT1-203ENST00000426530 WDR6Q9NNW5 1121 aaKnown RBP27.36■■□□□ 1.97
PTPMT1-203ENST00000426530 TOPORSQ9NS56 1045 aaPredicted RBP27.36■■□□□ 1.97
PTPMT1-203ENST00000426530 MAPTP10636 758 aaKnown RBP27.35■■□□□ 1.97
PTPMT1-203ENST00000426530 GBP2P32456 591 aaPredicted RBP27.35■■□□□ 1.97
PTPMT1-203ENST00000426530 BRCC3P46736 316 aa27.35■■□□□ 1.97
PTPMT1-203ENST00000426530 ELAVL2Q12926 359 aaKnown RBP27.35■■□□□ 1.97
PTPMT1-203ENST00000426530 STRN3Q13033 797 aa27.35■■□□□ 1.97
PTPMT1-203ENST00000426530 UPP1Q16831 310 aa27.35■■□□□ 1.97
PTPMT1-203ENST00000426530 ALKAL1Q6UXT8 129 aa27.35■■□□□ 1.97
PTPMT1-203ENST00000426530 BRAPQ7Z569 592 aa27.35■■□□□ 1.97
PTPMT1-203ENST00000426530 AK8Q96MA6 479 aa27.35■■□□□ 1.97
PTPMT1-203ENST00000426530 NTPCRQ9BSD7 190 aaKnown RBP27.35■■□□□ 1.97
PTPMT1-203ENST00000426530 FBXW11Q9UKB1 542 aa27.35■■□□□ 1.97
PTPMT1-203ENST00000426530 TMEM189-UBE2V1I3L0A0 370 aa27.34■■□□□ 1.97
PTPMT1-203ENST00000426530 TKTP29401 623 aaKnown RBP27.34■■□□□ 1.97
PTPMT1-203ENST00000426530 UBA7P41226 1012 aa27.34■■□□□ 1.97
PTPMT1-203ENST00000426530 KARSQ15046 597 aaKnown RBP27.34■■□□□ 1.97
PTPMT1-203ENST00000426530 XKR4Q5GH76 650 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms