RNA–Protein interactions for RNA: ENST00000425989.5

HDLBP-211, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-211ENST00000425989 NT5C1BQ96P26 610 aa10.39□□□□□ -0.75
HDLBP-211ENST00000425989 EIF3CQ99613 913 aaKnown RBP10.39□□□□□ -0.75
HDLBP-211ENST00000425989 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.39□□□□□ -0.752e-10■■□□□ 13.3
HDLBP-211ENST00000425989 INTS2Q9H0H0 1204 aaKnown RBP10.39□□□□□ -0.75
HDLBP-211ENST00000425989 FAM49AQ9H0Q0 323 aaPredicted RBP10.39□□□□□ -0.75
HDLBP-211ENST00000425989 ANKFY1Q9P2R3 1169 aa10.39□□□□□ -0.75
HDLBP-211ENST00000425989 NOD1Q9Y239 953 aa10.39□□□□□ -0.75
HDLBP-211ENST00000425989 R3HCC1Q9Y3T6 440 aaKnown RBP10.39□□□□□ -0.75
HDLBP-211ENST00000425989 PTCH2Q9Y6C5 1203 aa10.39□□□□□ -0.75
HDLBP-211ENST00000425989 CITO14578 2027 aa10.39□□□□□ -0.75
HDLBP-211ENST00000425989 RNF225M0QZC1 329 aaPredicted RBP10.38□□□□□ -0.75
HDLBP-211ENST00000425989 ARVCFO00192 962 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 DNM1LO00429 736 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 XPOTO43592 962 aaKnown RBP10.38□□□□□ -0.75
HDLBP-211ENST00000425989 PHACTR2O75167 634 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 LCA5LO95447 670 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 PARNO95453 639 aaKnown RBP10.38□□□□□ -0.75
HDLBP-211ENST00000425989 GJB1P08034 283 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 IQCF3P0C7M6 154 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 TRIM49P0CI25 452 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 TRIM49CP0CI26 452 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 STAG3L1P0CL83 205 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 DLATP10515 647 aaKnown RBP10.38□□□□□ -0.75
HDLBP-211ENST00000425989 TBXAS1P24557 533 aaPredicted RBP10.38□□□□□ -0.75
HDLBP-211ENST00000425989 HOXA11P31270 313 aaPredicted RBP10.38□□□□□ -0.75
HDLBP-211ENST00000425989 ATICP31939 592 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 CLCN1P35523 988 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 YARSP54577 528 aaKnown RBP10.38□□□□□ -0.75
HDLBP-211ENST00000425989 JAM2P57087 298 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 DLG4P78352 724 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 GCNT1Q02742 428 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 SPA17Q15506 151 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 FAM47CQ5HY64 1035 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 GDF6Q6KF10 455 aaPredicted RBP10.38□□□□□ -0.75
HDLBP-211ENST00000425989 WDR59Q6PJI9 974 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 RUFY4Q6ZNE9 571 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 ZBTB33Q86T24 672 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 TTC39CQ8N584 583 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 CCDC155Q8N6L0 562 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 PLEKHO2Q8TD55 490 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 TRAIPQ9BWF2 469 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 IMPG2Q9BZV3 1241 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 HAPLN2Q9GZV7 340 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 CDT1Q9H211 546 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 PDZD7Q9H5P4 517 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 NHEJ1Q9H9Q4 299 aaPredicted RBP10.38□□□□□ -0.75
HDLBP-211ENST00000425989 PDE11AQ9HCR9 933 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 SIX2Q9NPC8 291 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 UBE2TQ9NPD8 197 aaPredicted RBP10.38□□□□□ -0.75
HDLBP-211ENST00000425989 NLRC4Q9NPP4 1024 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 PAK6Q9NQU5 681 aaPredicted RBP10.38□□□□□ -0.75
HDLBP-211ENST00000425989 TOPORSQ9NS56 1045 aaPredicted RBP10.38□□□□□ -0.75
HDLBP-211ENST00000425989 DNAJC12Q9UKB3 198 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 OGDHLQ9ULD0 1010 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 C2CD2Q9Y426 696 aa10.38□□□□□ -0.75
HDLBP-211ENST00000425989 MROH7Q68CQ1 1323 aa10.37□□□□□ -0.75
HDLBP-211ENST00000425989 LRRC53A6NM62 1247 aa10.37□□□□□ -0.75
HDLBP-211ENST00000425989 RPS6KA5O75582 802 aa10.37□□□□□ -0.75
HDLBP-211ENST00000425989 OFD1O75665 1012 aa10.37□□□□□ -0.75
HDLBP-211ENST00000425989 NDUFA10O95299 355 aa10.37□□□□□ -0.75
HDLBP-211ENST00000425989 ZSCAN20P17040 1043 aaPredicted RBP10.37□□□□□ -0.75
HDLBP-211ENST00000425989 PAX3P23760 479 aa10.37□□□□□ -0.75
HDLBP-211ENST00000425989 SOX5P35711 763 aa10.37□□□□□ -0.75
HDLBP-211ENST00000425989 KLK7P49862 253 aa10.37□□□□□ -0.75
HDLBP-211ENST00000425989 YWHAEP62258 255 aaKnown RBP10.37□□□□□ -0.75
HDLBP-211ENST00000425989 IRX5P78411 483 aaPredicted RBP10.37□□□□□ -0.75
HDLBP-211ENST00000425989 KLHL30Q0D2K2 578 aa10.37□□□□□ -0.75
HDLBP-211ENST00000425989 TRPC3Q13507 836 aa10.37□□□□□ -0.75
HDLBP-211ENST00000425989 ASIC2Q16515 512 aa10.37□□□□□ -0.75
HDLBP-211ENST00000425989 IRF2BP2Q7Z5L9 587 aa10.37□□□□□ -0.75
HDLBP-211ENST00000425989 THNSL1Q8IYQ7 743 aa10.37□□□□□ -0.75
HDLBP-211ENST00000425989 CAGE1Q8TC20 777 aa10.37□□□□□ -0.75
HDLBP-211ENST00000425989 ZNF516Q92618 1163 aa10.37□□□□□ -0.75
HDLBP-211ENST00000425989 CALR3Q96L12 384 aaKnown RBP10.37□□□□□ -0.75
HDLBP-211ENST00000425989 OSMRQ99650 979 aa10.37□□□□□ -0.75
HDLBP-211ENST00000425989 TRIM6Q9C030 488 aaPredicted RBP10.37□□□□□ -0.75
HDLBP-211ENST00000425989 DNAI2Q9GZS0 605 aa10.37□□□□□ -0.75
HDLBP-211ENST00000425989 DEF6Q9H4E7 631 aa10.37□□□□□ -0.75
HDLBP-211ENST00000425989 UBN1Q9NPG3 1134 aa10.37□□□□□ -0.75
HDLBP-211ENST00000425989 STARD7Q9NQZ5 370 aa10.37□□□□□ -0.75
HDLBP-211ENST00000425989 RNF216Q9NWF9 866 aaPredicted RBP10.37□□□□□ -0.75
HDLBP-211ENST00000425989 PYCARDQ9ULZ3 195 aa10.37□□□□□ -0.75
HDLBP-211ENST00000425989 GRIN2DO15399 1336 aa10.36□□□□□ -0.75
HDLBP-211ENST00000425989 TTLL13PA6NNM8 815 aa10.36□□□□□ -0.75
HDLBP-211ENST00000425989 TLR3O15455 904 aaKnown RBP10.36□□□□□ -0.75
HDLBP-211ENST00000425989 B4GALT5O43286 388 aa10.36□□□□□ -0.75
HDLBP-211ENST00000425989 AKR1B10O60218 316 aa10.36□□□□□ -0.75
HDLBP-211ENST00000425989 SLC34A2O95436 690 aa10.36□□□□□ -0.75
HDLBP-211ENST00000425989 STAU1O95793 577 aaKnown RBP10.36□□□□□ -0.75
HDLBP-211ENST00000425989 EDN1P05305 212 aa10.36□□□□□ -0.75
HDLBP-211ENST00000425989 FAM163BP0C2L3 166 aa10.36□□□□□ -0.75
HDLBP-211ENST00000425989 TMEM191BP0C7N4 346 aa10.36□□□□□ -0.75
HDLBP-211ENST00000425989 HSPA1AP0DMV8 641 aaKnown RBP10.36□□□□□ -0.75
HDLBP-211ENST00000425989 HSPA1BP0DMV9 641 aaKnown RBP10.36□□□□□ -0.75
HDLBP-211ENST00000425989 P4HA1P13674 534 aa10.36□□□□□ -0.75
HDLBP-211ENST00000425989 CDK7P50613 346 aa10.36□□□□□ -0.75
HDLBP-211ENST00000425989 RAB27AP51159 221 aa10.36□□□□□ -0.75
HDLBP-211ENST00000425989 ZNF200P98182 395 aaPredicted RBP10.36□□□□□ -0.75
HDLBP-211ENST00000425989 BIRC3Q13489 604 aa10.36□□□□□ -0.75
HDLBP-211ENST00000425989 BFSP2Q13515 415 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms