RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 TMC2Q8TDI7 906 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 WHAMMQ8TF30 809 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 FBXL18Q96ME1 805 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 SH3GL2Q99962 352 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 ZSWIM1Q9BR11 485 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 CARD9Q9H257 536 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 RBAKQ9NYW8 714 aaPredicted RBP12.41□□□□□ -0.42
UBR4-207ENST00000425413 ATP8A1Q9Y2Q0 1164 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 NFASCO94856 1347 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 GOLGA6L10A0A0M3HER8 536 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 GOLGA8KD6RF30 607 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 MAPK13O15264 365 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 ECM2O94769 699 aaPredicted RBP12.41□□□□□ -0.42
UBR4-207ENST00000425413 PLTPP55058 493 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 OSTNP61366 133 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 DHX9Q08211 1270 aaKnown RBP12.41□□□□□ -0.42
UBR4-207ENST00000425413 UAP1Q16222 522 aaPredicted RBP12.41□□□□□ -0.42
UBR4-207ENST00000425413 WDR44Q5JSH3 913 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 USP37Q86T82 979 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 SULF1Q8IWU6 871 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 OR5B17Q8NGF7 314 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 TRAPPC12Q8WVT3 735 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 MAGOHBQ96A72 148 aaKnown RBP12.41□□□□□ -0.42
UBR4-207ENST00000425413 PPP1R16BQ96T49 567 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 PCYT2Q99447 389 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 C17orf75Q9HAS0 396 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 LRRC4CQ9HCJ2 640 aa12.41□□□□□ -0.42
UBR4-207ENST00000425413 GSTTP1A0A1W2PQM5 241 aa12.4□□□□□ -0.42
UBR4-207ENST00000425413 EXTL3O43909 919 aa12.4□□□□□ -0.42
UBR4-207ENST00000425413 GJB6O95452 261 aa12.4□□□□□ -0.42
UBR4-207ENST00000425413 TCF7P36402 384 aaPredicted RBP12.4□□□□□ -0.42
UBR4-207ENST00000425413 SNRPFP62306 86 aaKnown RBP12.4□□□□□ -0.42
UBR4-207ENST00000425413 TMEM270Q6UE05 265 aa12.4□□□□□ -0.42
UBR4-207ENST00000425413 LBX2Q6XYB7 198 aa12.4□□□□□ -0.42
UBR4-207ENST00000425413 GPC2Q8N158 579 aa12.4□□□□□ -0.42
UBR4-207ENST00000425413 HVCN1Q96D96 273 aa12.4□□□□□ -0.42
UBR4-207ENST00000425413 CAPS2Q9BXY5 557 aa12.4□□□□□ -0.42
UBR4-207ENST00000425413 SPATC1LQ9H0A9 340 aa12.4□□□□□ -0.42
UBR4-207ENST00000425413 ANAPC7Q9UJX3 599 aa12.4□□□□□ -0.42
UBR4-207ENST00000425413 COQ4Q9Y3A0 265 aa12.4□□□□□ -0.42
UBR4-207ENST00000425413 LTBP3Q9NS15 1303 aa12.4□□□□□ -0.42
UBR4-207ENST00000425413 ATP2A1O14983 1001 aa12.4□□□□□ -0.42
UBR4-207ENST00000425413 GARTP22102 1010 aa12.4□□□□□ -0.42
UBR4-207ENST00000425413 TNFSF9P41273 254 aa12.4□□□□□ -0.42
UBR4-207ENST00000425413 SSR1P43307 286 aaKnown RBP12.4□□□□□ -0.42
UBR4-207ENST00000425413 STAT5BP51692 787 aa12.4□□□□□ -0.42
UBR4-207ENST00000425413 SNX1Q13596 522 aa12.4□□□□□ -0.42
UBR4-207ENST00000425413 CUL1Q13616 776 aa12.4□□□□□ -0.42
UBR4-207ENST00000425413 ZNF394Q53GI3 561 aa12.4□□□□□ -0.42
UBR4-207ENST00000425413 DDX1Q92499 740 aaKnown RBP12.4□□□□□ -0.42
UBR4-207ENST00000425413 CYFIP2Q96F07 1278 aa12.4□□□□□ -0.42
UBR4-207ENST00000425413 SGIP1Q9BQI5 828 aa12.4□□□□□ -0.42
UBR4-207ENST00000425413 PORCNQ9H237 461 aa12.4□□□□□ -0.42
UBR4-207ENST00000425413 SLITRK6Q9H5Y7 841 aa12.4□□□□□ -0.42
UBR4-207ENST00000425413 RRP15Q9Y3B9 282 aaKnown RBP12.4□□□□□ -0.42
UBR4-207ENST00000425413 PHIPQ8WWQ0 1821 aa12.4□□□□□ -0.43
UBR4-207ENST00000425413 SMIM23A6NLE4 172 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 CLDN3O15551 220 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 ARIH2O95376 493 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 IVLP07476 585 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 RRM1P23921 792 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 IRAK1P51617 712 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 PTENP60484 403 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 CRELD2Q6UXH1 353 aaPredicted RBP12.39□□□□□ -0.43
UBR4-207ENST00000425413 TMEM130Q8N3G9 435 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 PRELID2Q8N945 189 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 PRPF31Q8WWY3 499 aaKnown RBP12.39□□□□□ -0.43
UBR4-207ENST00000425413 COPS5Q92905 334 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 DCPSQ96C86 337 aaKnown RBP12.39□□□□□ -0.43
UBR4-207ENST00000425413 FAM118BQ9BPY3 351 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 APOBEC3GQ9HC16 384 aaKnown RBP12.39□□□□□ -0.43
UBR4-207ENST00000425413 DAAM1Q9Y4D1 1078 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 PCDHB4Q9Y5E5 795 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 MAFBQ9Y5Q3 323 aaPredicted RBP12.39□□□□□ -0.43
UBR4-207ENST00000425413 POLR2AP24928 1970 aaKnown RBP12.39□□□□□ -0.43
UBR4-207ENST00000425413 DOCK1Q14185 1865 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 MYO1CO00159 1063 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 CSDE1O75534 798 aaKnown RBP12.39□□□□□ -0.43
UBR4-207ENST00000425413 FARP2O94887 1054 aaPredicted RBP12.39□□□□□ -0.43
UBR4-207ENST00000425413 VNN1O95497 513 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 CD58P19256 250 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 GUCY1A3Q02108 690 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 CAPSQ13938 189 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 SEL1L2Q5TEA6 688 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 TTC27Q6P3X3 843 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 CHST13Q8NET6 341 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 C1orf54Q8WWF1 131 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 PSPC1Q8WXF1 523 aaKnown RBP12.39□□□□□ -0.43
UBR4-207ENST00000425413 C11orf70Q9BRQ4 267 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 DHX33Q9H6R0 707 aaKnown RBP12.39□□□□□ -0.43
UBR4-207ENST00000425413 GRIN3BO60391 1043 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 GZMAP12544 262 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 MAPK4P31152 587 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 HSPA9P38646 679 aaKnown RBP12.39□□□□□ -0.43
UBR4-207ENST00000425413 HSDL1Q3SXM5 330 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 ACAD10Q6JQN1 1059 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 C11orf63Q6NUN7 778 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 JAMLQ86YT9 394 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 ATP8B4Q8TF62 1192 aa12.39□□□□□ -0.43
UBR4-207ENST00000425413 FAM107BQ9H098 131 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms