RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 H2AFZP0C0S5 128 aa28.58■■■□□ 2.17
LDB1-202ENST00000425280 BIRC3Q13489 604 aa28.58■■■□□ 2.17
LDB1-202ENST00000425280 H2AFVQ71UI9 128 aa28.58■■■□□ 2.17
LDB1-202ENST00000425280 RSRC2Q7L4I2 434 aaKnown RBP28.58■■■□□ 2.17
LDB1-202ENST00000425280 SOCS4Q8WXH5 440 aa28.58■■■□□ 2.17
LDB1-202ENST00000425280 PPP1R16BQ96T49 567 aa28.58■■■□□ 2.17
LDB1-202ENST00000425280 FDXACB1Q9BRP7 624 aaPredicted RBP28.58■■■□□ 2.17
LDB1-202ENST00000425280 TNPO2O14787 897 aaKnown RBP28.58■■■□□ 2.17
LDB1-202ENST00000425280 SRGAP2O75044 1071 aa28.58■■■□□ 2.17
LDB1-202ENST00000425280 PIK3CAP42336 1068 aa28.58■■■□□ 2.17
LDB1-202ENST00000425280 TM4SF4P48230 202 aa28.58■■■□□ 2.17
LDB1-202ENST00000425280 GCNT1Q02742 428 aa28.58■■■□□ 2.17
LDB1-202ENST00000425280 EEF1DP3Q658K8 133 aa28.58■■■□□ 2.17
LDB1-202ENST00000425280 TLK2Q86UE8 772 aa28.58■■■□□ 2.17
LDB1-202ENST00000425280 OR5B17Q8NGF7 314 aa28.58■■■□□ 2.17
LDB1-202ENST00000425280 PRMT7Q9NVM4 692 aaPredicted RBP28.58■■■□□ 2.17
LDB1-202ENST00000425280 CPSF3Q9UKF6 684 aaKnown RBP28.58■■■□□ 2.17
LDB1-202ENST00000425280 CYP26A1O43174 497 aa28.57■■■□□ 2.16
LDB1-202ENST00000425280 SGPL1O95470 568 aa28.57■■■□□ 2.16
LDB1-202ENST00000425280 IGHA2P01877 340 aa28.57■■■□□ 2.16
LDB1-202ENST00000425280 CHMP4BP1P59074 171 aa28.57■■■□□ 2.16
LDB1-202ENST00000425280 FAM187BQ17R55 369 aa28.57■■■□□ 2.16
LDB1-202ENST00000425280 C1orf112Q9NSG2 853 aa28.57■■■□□ 2.16
LDB1-202ENST00000425280 TNFSF13BQ9Y275 285 aa28.57■■■□□ 2.16
LDB1-202ENST00000425280 PCDHGC5Q9Y5F6 944 aa28.57■■■□□ 2.16
LDB1-202ENST00000425280 CTGFP29279 349 aa28.57■■■□□ 2.16
LDB1-202ENST00000425280 GRM1Q13255 1194 aa28.57■■■□□ 2.16
LDB1-202ENST00000425280 ZNF568Q3ZCX4 644 aa28.57■■■□□ 2.16
LDB1-202ENST00000425280 PALB2Q86YC2 1186 aa28.57■■■□□ 2.16
LDB1-202ENST00000425280 CSDE1O75534 798 aaKnown RBP28.56■■■□□ 2.16
LDB1-202ENST00000425280 PALMO75781 387 aa28.56■■■□□ 2.16
LDB1-202ENST00000425280 GALCP54803 685 aa28.56■■■□□ 2.16
LDB1-202ENST00000425280 TMEM132AQ24JP5 1023 aa28.56■■■□□ 2.16
LDB1-202ENST00000425280 WDR44Q5JSH3 913 aa28.56■■■□□ 2.16
LDB1-202ENST00000425280 ENOSF1Q7L5Y1 443 aa28.56■■■□□ 2.16
LDB1-202ENST00000425280 CDR2LQ86X02 465 aaPredicted RBP28.56■■■□□ 2.16
LDB1-202ENST00000425280 EPS8L1Q8TE68 723 aa28.56■■■□□ 2.16
LDB1-202ENST00000425280 DHX38Q92620 1227 aaKnown RBP28.56■■■□□ 2.16
LDB1-202ENST00000425280 SEPT11Q9NVA2 429 aaKnown RBP28.56■■■□□ 2.16
LDB1-202ENST00000425280 NOCTQ9UK39 431 aaKnown RBP28.56■■■□□ 2.16
LDB1-202ENST00000425280 SNX12Q9UMY4 172 aa28.56■■■□□ 2.16
LDB1-202ENST00000425280 KAT6AQ92794 2004 aa28.56■■■□□ 2.16
LDB1-202ENST00000425280 AMHR2Q16671 573 aa28.55■■■□□ 2.16
LDB1-202ENST00000425280 GOLGA1Q92805 767 aa28.55■■■□□ 2.16
LDB1-202ENST00000425280 SETD4Q9NVD3 440 aa28.55■■■□□ 2.16
LDB1-202ENST00000425280 TMCO5BA8MYB1 307 aa28.55■■■□□ 2.16
LDB1-202ENST00000425280 F2P00734 622 aa28.55■■■□□ 2.16
LDB1-202ENST00000425280 IRX5P78411 483 aaPredicted RBP28.55■■■□□ 2.16
LDB1-202ENST00000425280 TEX35Q5T0J7 233 aa28.55■■■□□ 2.16
LDB1-202ENST00000425280 NOP9Q86U38 636 aaKnown RBP28.55■■■□□ 2.16
LDB1-202ENST00000425280 SLC47A2Q86VL8 602 aa28.55■■■□□ 2.16
LDB1-202ENST00000425280 WDR49Q8IV35 697 aa28.55■■■□□ 2.16
LDB1-202ENST00000425280 RPUSD2Q8IZ73 545 aaKnown RBP28.55■■■□□ 2.16
LDB1-202ENST00000425280 KIAA0319LQ8IZA0 1049 aa28.55■■■□□ 2.16
LDB1-202ENST00000425280 KAT2BQ92831 832 aa28.55■■■□□ 2.16
LDB1-202ENST00000425280 FAM81BQ96LP2 452 aa28.55■■■□□ 2.16
LDB1-202ENST00000425280 MAP7D2Q96T17 732 aa28.55■■■□□ 2.16
LDB1-202ENST00000425280 CDT1Q9H211 546 aa28.55■■■□□ 2.16
LDB1-202ENST00000425280 TAS2R14Q9NYV8 317 aa28.55■■■□□ 2.16
LDB1-202ENST00000425280 CA12O43570 354 aa28.54■■■□□ 2.16
LDB1-202ENST00000425280 THNSL1Q8IYQ7 743 aa28.54■■■□□ 2.16
LDB1-202ENST00000425280 ACP6Q9NPH0 428 aa28.54■■■□□ 2.16
LDB1-202ENST00000425280 GRID2IPA4D2P6 1211 aa28.54■■■□□ 2.16
LDB1-202ENST00000425280 RRN3P2A6NIE6 340 aa28.54■■■□□ 2.16
LDB1-202ENST00000425280 CHRNB2P17787 502 aa28.54■■■□□ 2.16
LDB1-202ENST00000425280 SPOPLQ6IQ16 392 aa28.54■■■□□ 2.16
LDB1-202ENST00000425280 LMBR1Q8WVP7 490 aa28.54■■■□□ 2.16
LDB1-202ENST00000425280 ARID3AQ99856 593 aa28.54■■■□□ 2.16
LDB1-202ENST00000425280 TLR10Q9BXR5 811 aa28.54■■■□□ 2.16
LDB1-202ENST00000425280 A0A0A6YYK5 440 aaPredicted RBP28.53■■■□□ 2.16
LDB1-202ENST00000425280 NCK2O43639 380 aa28.53■■■□□ 2.16
LDB1-202ENST00000425280 PRLRP16471 622 aa28.53■■■□□ 2.16
LDB1-202ENST00000425280 AP3M2P53677 418 aa28.53■■■□□ 2.16
LDB1-202ENST00000425280 NLRP7Q8WX94 980 aa28.53■■■□□ 2.16
LDB1-202ENST00000425280 FAM212AQ96EL1 285 aa28.53■■■□□ 2.16
LDB1-202ENST00000425280 GPBP1L1Q9HC44 474 aaPredicted RBP28.53■■■□□ 2.16
LDB1-202ENST00000425280 CTAGE15A4D2H0 777 aa28.52■■■□□ 2.16
LDB1-202ENST00000425280 ZNF185O15231 689 aa28.52■■■□□ 2.16
LDB1-202ENST00000425280 ZEB2O60315 1214 aa28.52■■■□□ 2.16
LDB1-202ENST00000425280 CTAGE8P0CG41 777 aa28.52■■■□□ 2.16
LDB1-202ENST00000425280 SMIM10L2AP0DMW4 78 aa28.52■■■□□ 2.16
LDB1-202ENST00000425280 SMIM10L2BP0DMW5 78 aa28.52■■■□□ 2.16
LDB1-202ENST00000425280 SURF1Q15526 300 aa28.52■■■□□ 2.16
LDB1-202ENST00000425280 CTAGE6Q86UF2 777 aa28.52■■■□□ 2.16
LDB1-202ENST00000425280 CTAGE4Q8IX94 777 aa28.52■■■□□ 2.16
LDB1-202ENST00000425280 CEP120Q8N960 986 aa28.52■■■□□ 2.16
LDB1-202ENST00000425280 APOBEC3GQ9HC16 384 aaKnown RBP28.52■■■□□ 2.16
LDB1-202ENST00000425280 MGAMO43451 1857 aa28.52■■■□□ 2.16
LDB1-202ENST00000425280 PHACTR2O75167 634 aa28.52■■■□□ 2.16
LDB1-202ENST00000425280 TMEM253P0C7T8 217 aa28.52■■■□□ 2.16
LDB1-202ENST00000425280 CYP11B1P15538 503 aa28.52■■■□□ 2.16
LDB1-202ENST00000425280 SMC1BQ8NDV3 1235 aa28.52■■■□□ 2.16
LDB1-202ENST00000425280 HHIPL1Q96JK4 782 aa28.52■■■□□ 2.16
LDB1-202ENST00000425280 CAPZA3Q96KX2 299 aa28.52■■■□□ 2.16
LDB1-202ENST00000425280 PCDHB18PQ96TA0 734 aa28.52■■■□□ 2.16
LDB1-202ENST00000425280 TMEM88BA6NKF7 163 aa28.51■■■□□ 2.15
LDB1-202ENST00000425280 GPR25O00155 361 aa28.51■■■□□ 2.15
LDB1-202ENST00000425280 KIF3CO14782 793 aa28.51■■■□□ 2.15
LDB1-202ENST00000425280 NOP2P46087 812 aaKnown RBP28.51■■■□□ 2.15
LDB1-202ENST00000425280 OSTNP61366 133 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms