RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 PARK7Q99497 189 aaKnown RBP11.46□□□□□ -0.57
CUX1-205ENST00000425244 CARD9Q9H257 536 aa11.46□□□□□ -0.57
CUX1-205ENST00000425244 TBC1D22BQ9NU19 505 aa11.46□□□□□ -0.57
CUX1-205ENST00000425244 FAM169AQ9Y6X4 670 aa11.46□□□□□ -0.57
CUX1-205ENST00000425244 LCTP09848 1927 aa11.46□□□□□ -0.57
CUX1-205ENST00000425244 TRPM7Q96QT4 1865 aa11.46□□□□□ -0.57
CUX1-205ENST00000425244 ADORA2AP29274 412 aa11.46□□□□□ -0.58
CUX1-205ENST00000425244 SEC24CP53992 1094 aa11.46□□□□□ -0.58
CUX1-205ENST00000425244 GPC5P78333 572 aa11.46□□□□□ -0.58
CUX1-205ENST00000425244 CCNA1P78396 465 aa11.46□□□□□ -0.58
CUX1-205ENST00000425244 IFFO1Q0D2I5 559 aa11.46□□□□□ -0.58
CUX1-205ENST00000425244 SNRNP35Q16560 246 aaKnown RBP11.46□□□□□ -0.58
CUX1-205ENST00000425244 LY6KQ17RY6 165 aa11.46□□□□□ -0.58
CUX1-205ENST00000425244 TMC3Q7Z5M5 1100 aa11.46□□□□□ -0.58
CUX1-205ENST00000425244 NOP9Q86U38 636 aaKnown RBP11.46□□□□□ -0.58
CUX1-205ENST00000425244 SLC47A2Q86VL8 602 aa11.46□□□□□ -0.58
CUX1-205ENST00000425244 FBXO16Q8IX29 292 aaPredicted RBP11.46□□□□□ -0.58
CUX1-205ENST00000425244 BTBD6Q96KE9 485 aa11.46□□□□□ -0.58
CUX1-205ENST00000425244 FAM84AQ96KN4 292 aa11.46□□□□□ -0.58
CUX1-205ENST00000425244 PCDHB18PQ96TA0 734 aa11.46□□□□□ -0.58
CUX1-205ENST00000425244 NAP1L3Q99457 506 aaPredicted RBP11.46□□□□□ -0.58
CUX1-205ENST00000425244 MROH8Q9H579 483 aa11.46□□□□□ -0.58
CUX1-205ENST00000425244 FAM114A2Q9NRY5 505 aa11.46□□□□□ -0.58
CUX1-205ENST00000425244 TOPORSQ9NS56 1045 aaPredicted RBP11.46□□□□□ -0.58
CUX1-205ENST00000425244 A0A0G2JMZ2 1700 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 ANKRD63C9JTQ0 380 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 MYO1FO00160 1098 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 PTENP60484 403 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 KRT71Q3SY84 523 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 CYP4F22Q6NT55 531 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 LRIG3Q6UXM1 1119 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 NIPA1Q7RTP0 329 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 CPNE8Q86YQ8 564 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 UBL4BQ8N7F7 174 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 EIF1ADQ8N9N8 165 aaKnown RBP11.45□□□□□ -0.58
CUX1-205ENST00000425244 SEMA4DQ92854 862 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 GPRASP2Q96D09 838 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 C18orf8Q96DM3 657 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 IWS1Q96ST2 819 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 FMO2Q99518 471 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 RAB17Q9H0T7 212 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 SNX24Q9Y343 169 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 CEP83Q9Y592 693 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 WDR64B1ANS9 1081 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 H0YGN5 161 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 CLSTN1O94985 981 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 DLATP10515 647 aaKnown RBP11.45□□□□□ -0.58
CUX1-205ENST00000425244 KCNA2P16389 499 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 COMTP21964 271 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 MAGEA9P43362 315 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 PLTPP55058 493 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 PSMC5P62195 406 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 GTF2BQ00403 316 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 MTMR3Q13615 1198 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 TMEM63BQ5T3F8 832 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 CEP120Q8N960 986 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 KREMEN1Q96MU8 473 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 JPH1Q9HDC5 661 aaPredicted RBP11.45□□□□□ -0.58
CUX1-205ENST00000425244 PPANQ9NQ55 473 aaKnown RBP11.45□□□□□ -0.58
CUX1-205ENST00000425244 TTC7AQ9ULT0 858 aaPredicted RBP11.45□□□□□ -0.58
CUX1-205ENST00000425244 DAAM1Q9Y4D1 1078 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 NFS1Q9Y697 457 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 ZNFX1Q9P2E3 1918 aaKnown RBP11.45□□□□□ -0.58
CUX1-205ENST00000425244 DENND3A2RUS2 1198 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 A6NNZ2 444 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 SPOPO43791 374 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 CALCAP01258 141 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 MMEP08473 750 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 MAPTP10636 758 aaKnown RBP11.45□□□□□ -0.58
CUX1-205ENST00000425244 ADSSP30520 456 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 MDH1P40925 334 aaKnown RBP11.45□□□□□ -0.58
CUX1-205ENST00000425244 LIG3P49916 1009 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 SMTNP53814 917 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 POU5F1Q01860 360 aaKnown RBP11.45□□□□□ -0.58
CUX1-205ENST00000425244 DMP1Q13316 513 aaPredicted RBP11.45□□□□□ -0.58
CUX1-205ENST00000425244 TUBB8Q3ZCM7 444 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 SWSAP1Q6NVH7 229 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 DPP9Q86TI2 863 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 EPS8L1Q8TE68 723 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 DHX38Q92620 1227 aaKnown RBP11.45□□□□□ -0.58
CUX1-205ENST00000425244 TBX20Q9UMR3 447 aa11.45□□□□□ -0.58
CUX1-205ENST00000425244 NOVA2Q9UNW9 492 aaKnown RBP11.45□□□□□ -0.58
CUX1-205ENST00000425244 DIS3Q9Y2L1 958 aaKnown RBP11.45□□□□□ -0.58
CUX1-205ENST00000425244 PASKQ96RG2 1323 aa11.44□□□□□ -0.58
CUX1-205ENST00000425244 E7EVH7 732 aa11.44□□□□□ -0.58
CUX1-205ENST00000425244 P4HA2O15460 535 aa11.44□□□□□ -0.58
CUX1-205ENST00000425244 RTN2O75298 545 aa11.44□□□□□ -0.58
CUX1-205ENST00000425244 CHRNB2P17787 502 aa11.44□□□□□ -0.58
CUX1-205ENST00000425244 NPTX2P47972 431 aa11.44□□□□□ -0.58
CUX1-205ENST00000425244 GCLCP48506 637 aaPredicted RBP11.44□□□□□ -0.58
CUX1-205ENST00000425244 PTGISQ16647 500 aa11.44□□□□□ -0.58
CUX1-205ENST00000425244 ICE2Q659A1 982 aa11.44□□□□□ -0.58
CUX1-205ENST00000425244 XRRA1Q6P2D8 792 aa11.44□□□□□ -0.58
CUX1-205ENST00000425244 RUFY4Q6ZNE9 571 aa11.44□□□□□ -0.58
CUX1-205ENST00000425244 JAMLQ86YT9 394 aa11.44□□□□□ -0.58
CUX1-205ENST00000425244 SMC1BQ8NDV3 1235 aa11.44□□□□□ -0.58
CUX1-205ENST00000425244 ATP8B4Q8TF62 1192 aa11.44□□□□□ -0.58
CUX1-205ENST00000425244 MAGOHBQ96A72 148 aaKnown RBP11.44□□□□□ -0.58
CUX1-205ENST00000425244 ZNF653Q96CK0 615 aa11.44□□□□□ -0.58
CUX1-205ENST00000425244 ZSWIM1Q9BR11 485 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms