RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 PIDD1Q9HB75 910 aa16.56■□□□□ 0.24
ATG4B-209ENST00000425239 ZFP37Q9Y6Q3 630 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-209ENST00000425239 TRIP11Q15643 1979 aa16.56■□□□□ 0.24
ATG4B-209ENST00000425239 CACNA1AO00555 2505 aa16.55■□□□□ 0.24
ATG4B-209ENST00000425239 MYH15Q9Y2K3 1946 aa16.55■□□□□ 0.24
ATG4B-209ENST00000425239 RECQL4O94761 1208 aa16.55■□□□□ 0.24
ATG4B-209ENST00000425239 THP07101 528 aa16.55■□□□□ 0.24
ATG4B-209ENST00000425239 DCNP07585 359 aaKnown RBP16.55■□□□□ 0.24
ATG4B-209ENST00000425239 HNRNPA1P09651 372 aaKnown RBP eCLIP16.55■□□□□ 0.24
ATG4B-209ENST00000425239 FGFR3P22607 806 aa16.55■□□□□ 0.24
ATG4B-209ENST00000425239 FSHRP23945 695 aa16.55■□□□□ 0.24
ATG4B-209ENST00000425239 GPC5P78333 572 aa16.55■□□□□ 0.24
ATG4B-209ENST00000425239 NT5DC1Q5TFE4 455 aa16.55■□□□□ 0.24
ATG4B-209ENST00000425239 PADI6Q6TGC4 694 aa16.55■□□□□ 0.24
ATG4B-209ENST00000425239 PPP1R10Q96QC0 940 aaKnown RBP16.55■□□□□ 0.24
ATG4B-209ENST00000425239 DDX23Q9BUQ8 820 aaKnown RBP16.55■□□□□ 0.24
ATG4B-209ENST00000425239 POLD4Q9HCU8 107 aa16.55■□□□□ 0.24
ATG4B-209ENST00000425239 CDH7Q9ULB5 785 aa16.55■□□□□ 0.24
ATG4B-209ENST00000425239 N4BP3O15049 544 aa16.54■□□□□ 0.24
ATG4B-209ENST00000425239 POU2F2P09086 479 aa16.54■□□□□ 0.24
ATG4B-209ENST00000425239 HOXA9P31269 272 aa16.54■□□□□ 0.24
ATG4B-209ENST00000425239 MCM7P33993 719 aa16.54■□□□□ 0.24
ATG4B-209ENST00000425239 NAMPTP43490 491 aa16.54■□□□□ 0.24
ATG4B-209ENST00000425239 FOXK2Q01167 660 aa16.54■□□□□ 0.24
ATG4B-209ENST00000425239 PRPF4BQ13523 1007 aaKnown RBP16.54■□□□□ 0.24
ATG4B-209ENST00000425239 RAB33AQ14088 237 aa16.54■□□□□ 0.24
ATG4B-209ENST00000425239 PSMD5Q16401 504 aa16.54■□□□□ 0.24
ATG4B-209ENST00000425239 ALKAL1Q6UXT8 129 aa16.54■□□□□ 0.24
ATG4B-209ENST00000425239 ITFG1Q8TB96 612 aa16.54■□□□□ 0.24
ATG4B-209ENST00000425239 FGF13Q92913 245 aa16.54■□□□□ 0.24
ATG4B-209ENST00000425239 ARHGEF3Q9NR81 526 aa16.54■□□□□ 0.24
ATG4B-209ENST00000425239 SIT1Q9Y3P8 196 aa16.54■□□□□ 0.24
ATG4B-209ENST00000425239 TMEM189-UBE2V1I3L0A0 370 aa16.53■□□□□ 0.24
ATG4B-209ENST00000425239 LRRN2O75325 713 aa16.53■□□□□ 0.24
ATG4B-209ENST00000425239 PRKCBP05771 671 aa16.53■□□□□ 0.24
ATG4B-209ENST00000425239 C8AP07357 584 aa16.53■□□□□ 0.24
ATG4B-209ENST00000425239 RBM25P49756 843 aaKnown RBP16.53■□□□□ 0.24
ATG4B-209ENST00000425239 MAPK6Q16659 721 aa16.53■□□□□ 0.24
ATG4B-209ENST00000425239 UVSSAQ2YD98 709 aa16.53■□□□□ 0.24
ATG4B-209ENST00000425239 XKR4Q5GH76 650 aa16.53■□□□□ 0.24
ATG4B-209ENST00000425239 DCLRE1AQ6PJP8 1040 aa16.53■□□□□ 0.24
ATG4B-209ENST00000425239 CEP57Q86XR8 500 aa16.53■□□□□ 0.24
ATG4B-209ENST00000425239 ZBTB8OSQ8IWT0 167 aa16.53■□□□□ 0.24
ATG4B-209ENST00000425239 C3orf58Q8NDZ4 430 aa16.53■□□□□ 0.24
ATG4B-209ENST00000425239 C2orf40Q9H1Z8 148 aa16.53■□□□□ 0.24
ATG4B-209ENST00000425239 SEMA4AQ9H3S1 761 aa16.53■□□□□ 0.24
ATG4B-209ENST00000425239 PTPRHQ9HD43 1115 aa16.53■□□□□ 0.24
ATG4B-209ENST00000425239 DNMT3BQ9UBC3 853 aaKnown RBP16.53■□□□□ 0.24
ATG4B-209ENST00000425239 R4GN57 208 aa16.53■□□□□ 0.24
ATG4B-209ENST00000425239 OTOGLQ3ZCN5 2332 aa16.52■□□□□ 0.24
ATG4B-209ENST00000425239 SHISA7A6NL88 538 aa16.52■□□□□ 0.24
ATG4B-209ENST00000425239 STK25O00506 426 aa16.52■□□□□ 0.24
ATG4B-209ENST00000425239 SP9P0CG40 484 aa16.52■□□□□ 0.24
ATG4B-209ENST00000425239 MUTP22033 750 aa16.52■□□□□ 0.24
ATG4B-209ENST00000425239 OR1D2P34982 312 aa16.52■□□□□ 0.24
ATG4B-209ENST00000425239 CLCNKBP51801 687 aa16.52■□□□□ 0.24
ATG4B-209ENST00000425239 NEK4P51957 841 aa16.52■□□□□ 0.24
ATG4B-209ENST00000425239 FOSBP53539 338 aa16.52■□□□□ 0.24
ATG4B-209ENST00000425239 GUCY1B3Q02153 619 aa16.52■□□□□ 0.24
ATG4B-209ENST00000425239 UPP1Q16831 310 aa16.52■□□□□ 0.24
ATG4B-209ENST00000425239 AXDND1Q5T1B0 1012 aaPredicted RBP16.52■□□□□ 0.24
ATG4B-209ENST00000425239 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.52■□□□□ 0.24
ATG4B-209ENST00000425239 C1orf210Q8IVY1 113 aa16.52■□□□□ 0.24
ATG4B-209ENST00000425239 PJA1Q8NG27 643 aa16.52■□□□□ 0.24
ATG4B-209ENST00000425239 CCDC43Q96MW1 224 aaKnown RBP16.52■□□□□ 0.24
ATG4B-209ENST00000425239 KIFC3Q9BVG8 833 aa16.52■□□□□ 0.24
ATG4B-209ENST00000425239 FOXQ1Q9C009 403 aa16.52■□□□□ 0.24
ATG4B-209ENST00000425239 HCFC1R1Q9NWW0 138 aa16.52■□□□□ 0.24
ATG4B-209ENST00000425239 MTRRQ9UBK8 725 aa16.52■□□□□ 0.24
ATG4B-209ENST00000425239 CCL16O15467 120 aa16.51■□□□□ 0.23
ATG4B-209ENST00000425239 MEFVO15553 781 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-209ENST00000425239 TBC1D4O60343 1298 aa16.51■□□□□ 0.23
ATG4B-209ENST00000425239 SEC24BO95487 1268 aa16.51■□□□□ 0.23
ATG4B-209ENST00000425239 LMNAP02545 664 aaKnown RBP16.51■□□□□ 0.23
ATG4B-209ENST00000425239 SOX4Q06945 474 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-209ENST00000425239 ELAVL2Q12926 359 aaKnown RBP16.51■□□□□ 0.23
ATG4B-209ENST00000425239 ORC2Q13416 577 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-209ENST00000425239 ZNF174Q15697 407 aa16.51■□□□□ 0.23
ATG4B-209ENST00000425239 SPECC1Q5M775 1068 aa16.51■□□□□ 0.23
ATG4B-209ENST00000425239 PPM1LQ5SGD2 360 aa16.51■□□□□ 0.23
ATG4B-209ENST00000425239 GDAQ9Y2T3 454 aa16.51■□□□□ 0.23
ATG4B-209ENST00000425239 MTF2Q9Y483 593 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-209ENST00000425239 BACE2Q9Y5Z0 518 aa16.51■□□□□ 0.23
ATG4B-209ENST00000425239 SMIM28A0A1B0GU29 152 aa16.5■□□□□ 0.23
ATG4B-209ENST00000425239 ABLIM1O14639 778 aa16.5■□□□□ 0.23
ATG4B-209ENST00000425239 OR52Z1P0C646 297 aa16.5■□□□□ 0.23
ATG4B-209ENST00000425239 ID4P47928 161 aa16.5■□□□□ 0.23
ATG4B-209ENST00000425239 FZD5Q13467 585 aa16.5■□□□□ 0.23
ATG4B-209ENST00000425239 SNW1Q13573 536 aaKnown RBP16.5■□□□□ 0.23
ATG4B-209ENST00000425239 GLRA4Q5JXX5 417 aa16.5■□□□□ 0.23
ATG4B-209ENST00000425239 PDXDC1Q6P996 788 aa16.5■□□□□ 0.23
ATG4B-209ENST00000425239 RTL10Q7L3V2 364 aa16.5■□□□□ 0.23
ATG4B-209ENST00000425239 TAS1R3Q7RTX0 852 aa16.5■□□□□ 0.23
ATG4B-209ENST00000425239 ERMP1Q7Z2K6 904 aa16.5■□□□□ 0.23
ATG4B-209ENST00000425239 NPAS3Q8IXF0 933 aa16.5■□□□□ 0.23
ATG4B-209ENST00000425239 DAW1Q8N136 415 aa16.5■□□□□ 0.23
ATG4B-209ENST00000425239 CEP120Q8N960 986 aa16.5■□□□□ 0.23
ATG4B-209ENST00000425239 SUMF1Q8NBK3 374 aa16.5■□□□□ 0.23
ATG4B-209ENST00000425239 SLC7A14Q8TBB6 771 aa16.5■□□□□ 0.23
ATG4B-209ENST00000425239 DDX27Q96GQ7 796 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms