RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 SCAPQ12770 1279 aa6.82□□□□□ -1.32
LINC01040-201ENST00000425048 ZNF169Q14929 603 aaPredicted RBP6.82□□□□□ -1.32
LINC01040-201ENST00000425048 MED25Q71SY5 747 aa6.82□□□□□ -1.32
LINC01040-201ENST00000425048 EAF2Q96CJ1 260 aaPredicted RBP6.82□□□□□ -1.32
LINC01040-201ENST00000425048 KIAA1586Q9HCI6 787 aa6.82□□□□□ -1.32
LINC01040-201ENST00000425048 ADCY6O43306 1168 aa6.81□□□□□ -1.32
LINC01040-201ENST00000425048 AKR1B10O60218 316 aa6.81□□□□□ -1.32
LINC01040-201ENST00000425048 IGLV2-14P01704 120 aa6.81□□□□□ -1.32
LINC01040-201ENST00000425048 ADSLP30566 484 aaPredicted RBP6.81□□□□□ -1.32
LINC01040-201ENST00000425048 RARRES1P49788 294 aa6.81□□□□□ -1.32
LINC01040-201ENST00000425048 KRTAP10-11P60412 298 aa6.81□□□□□ -1.32
LINC01040-201ENST00000425048 PDCD1Q15116 288 aa6.81□□□□□ -1.32
LINC01040-201ENST00000425048 ATP13A4Q4VNC1 1196 aa6.81□□□□□ -1.32
LINC01040-201ENST00000425048 RRP12Q5JTH9 1297 aaKnown RBP6.81□□□□□ -1.32
LINC01040-201ENST00000425048 ZNF362Q5T0B9 420 aaPredicted RBP6.81□□□□□ -1.32
LINC01040-201ENST00000425048 B3GNTL1Q67FW5 361 aaPredicted RBP6.81□□□□□ -1.32
LINC01040-201ENST00000425048 ZNF572Q7Z3I7 529 aaPredicted RBP6.81□□□□□ -1.32
LINC01040-201ENST00000425048 FAM43AQ8N2R8 423 aa6.81□□□□□ -1.32
LINC01040-201ENST00000425048 REPS2Q8NFH8 660 aa6.81□□□□□ -1.32
LINC01040-201ENST00000425048 BOD1Q96IK1 185 aa6.81□□□□□ -1.32
LINC01040-201ENST00000425048 FEZ1Q99689 392 aa6.81□□□□□ -1.32
LINC01040-201ENST00000425048 TBCCD1Q9NVR7 557 aa6.81□□□□□ -1.32
LINC01040-201ENST00000425048 PLAAQ9Y263 795 aa6.81□□□□□ -1.32
LINC01040-201ENST00000425048 PNPLA7Q6ZV29 1317 aa6.8□□□□□ -1.32
LINC01040-201ENST00000425048 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.8□□□□□ -1.32
LINC01040-201ENST00000425048 FSCN1Q16658 493 aaKnown RBP6.8□□□□□ -1.32
LINC01040-201ENST00000425048 MST1LQ2TV78 715 aa6.8□□□□□ -1.32
LINC01040-201ENST00000425048 FAM180AQ6UWF9 173 aa6.8□□□□□ -1.32
LINC01040-201ENST00000425048 Q6ZNX1 250 aa6.8□□□□□ -1.32
LINC01040-201ENST00000425048 GLCCI1Q86VQ1 547 aa6.8□□□□□ -1.32
LINC01040-201ENST00000425048 GPR156Q8NFN8 814 aa6.8□□□□□ -1.32
LINC01040-201ENST00000425048 OR7D4Q8NG98 312 aa6.8□□□□□ -1.32
LINC01040-201ENST00000425048 LEO1Q8WVC0 666 aaPredicted RBP6.8□□□□□ -1.32
LINC01040-201ENST00000425048 RIN2Q8WYP3 895 aaPredicted RBP6.8□□□□□ -1.32
LINC01040-201ENST00000425048 FUBP1Q96AE4 644 aaKnown RBP6.8□□□□□ -1.32
LINC01040-201ENST00000425048 MFSD3Q96ES6 412 aa6.8□□□□□ -1.32
LINC01040-201ENST00000425048 RAX2Q96IS3 184 aa6.8□□□□□ -1.32
LINC01040-201ENST00000425048 BCO1Q9HAY6 547 aa6.8□□□□□ -1.32
LINC01040-201ENST00000425048 TMEM74BQ9NUR3 256 aa6.8□□□□□ -1.32
LINC01040-201ENST00000425048 A0A1B0GTW7 788 aa6.79□□□□□ -1.32
LINC01040-201ENST00000425048 RAP2BP61225 183 aa6.79□□□□□ -1.32
LINC01040-201ENST00000425048 SIM1P81133 766 aaPredicted RBP6.79□□□□□ -1.32
LINC01040-201ENST00000425048 DALRD3Q5D0E6 543 aaKnown RBP6.79□□□□□ -1.32
LINC01040-201ENST00000425048 GJC2Q5T442 439 aaPredicted RBP6.79□□□□□ -1.32
LINC01040-201ENST00000425048 TRMT2AQ8IZ69 625 aaKnown RBP6.79□□□□□ -1.32
LINC01040-201ENST00000425048 FUBP3Q96I24 572 aaKnown RBP eCLIP6.79□□□□□ -1.32
LINC01040-201ENST00000425048 ACAP3Q96P50 834 aa6.79□□□□□ -1.32
LINC01040-201ENST00000425048 PIF1Q9H611 641 aa6.79□□□□□ -1.32
LINC01040-201ENST00000425048 GALNT9Q9HCQ5 603 aa6.79□□□□□ -1.32
LINC01040-201ENST00000425048 CASS4Q9NQ75 786 aa6.79□□□□□ -1.32
LINC01040-201ENST00000425048 DPP7Q9UHL4 492 aa6.79□□□□□ -1.32
LINC01040-201ENST00000425048 ALOX15P16050 662 aaPredicted RBP6.78□□□□□ -1.32
LINC01040-201ENST00000425048 CDK17Q00537 523 aa6.78□□□□□ -1.32
LINC01040-201ENST00000425048 NHLH1Q02575 133 aa6.78□□□□□ -1.32
LINC01040-201ENST00000425048 SP140Q13342 867 aa6.78□□□□□ -1.32
LINC01040-201ENST00000425048 DRC7Q8IY82 874 aa6.78□□□□□ -1.32
LINC01040-201ENST00000425048 ZNF384Q8TF68 577 aa6.78□□□□□ -1.32
LINC01040-201ENST00000425048 RNF31Q96EP0 1072 aa6.78□□□□□ -1.32
LINC01040-201ENST00000425048 MRI1Q9BV20 369 aa6.78□□□□□ -1.32
LINC01040-201ENST00000425048 RNPEPQ9H4A4 650 aa6.78□□□□□ -1.32
LINC01040-201ENST00000425048 SEMA4GQ9NTN9 838 aa6.78□□□□□ -1.32
LINC01040-201ENST00000425048 LRIT1Q9P2V4 623 aa6.78□□□□□ -1.32
LINC01040-201ENST00000425048 EDARQ9UNE0 448 aa6.78□□□□□ -1.32
LINC01040-201ENST00000425048 FRMD4BQ9Y2L6 1034 aa6.78□□□□□ -1.32
LINC01040-201ENST00000425048 ATRNL1Q5VV63 1379 aa6.78□□□□□ -1.32
LINC01040-201ENST00000425048 POMCP01189 267 aa6.77□□□□□ -1.33
LINC01040-201ENST00000425048 CXADRP78310 365 aa6.77□□□□□ -1.33
LINC01040-201ENST00000425048 OCA2Q04671 838 aa6.77□□□□□ -1.33
LINC01040-201ENST00000425048 UBXN2BQ14CS0 331 aa6.77□□□□□ -1.33
LINC01040-201ENST00000425048 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.77□□□□□ -1.33
LINC01040-201ENST00000425048 SP5Q6BEB4 398 aaPredicted RBP6.77□□□□□ -1.33
LINC01040-201ENST00000425048 UBXN4Q92575 508 aa6.77□□□□□ -1.33
LINC01040-201ENST00000425048 DRC1Q96MC2 740 aa6.77□□□□□ -1.33
LINC01040-201ENST00000425048 ZSWIM1Q9BR11 485 aa6.77□□□□□ -1.33
LINC01040-201ENST00000425048 TOPORSQ9NS56 1045 aaPredicted RBP6.77□□□□□ -1.33
LINC01040-201ENST00000425048 MOCS1Q9NZB8 636 aa6.77□□□□□ -1.33
LINC01040-201ENST00000425048 FAM30AQ9NZY2 134 aa6.77□□□□□ -1.33
LINC01040-201ENST00000425048 CDC45O75419 566 aa6.76□□□□□ -1.33
LINC01040-201ENST00000425048 MATN4O95460 622 aa6.76□□□□□ -1.33
LINC01040-201ENST00000425048 IL2RBP14784 551 aa6.76□□□□□ -1.33
LINC01040-201ENST00000425048 ENPP1P22413 925 aa6.76□□□□□ -1.33
LINC01040-201ENST00000425048 ECHS1P30084 290 aa6.76□□□□□ -1.33
LINC01040-201ENST00000425048 CACNA2D1P54289 1103 aa6.76□□□□□ -1.33
LINC01040-201ENST00000425048 PER3P56645 1201 aa6.76□□□□□ -1.33
LINC01040-201ENST00000425048 FOXR2Q6PJQ5 311 aa6.76□□□□□ -1.33
LINC01040-201ENST00000425048 Q6ZVL8 140 aa6.76□□□□□ -1.33
LINC01040-201ENST00000425048 ARHGEF25Q86VW2 580 aa6.76□□□□□ -1.33
LINC01040-201ENST00000425048 USP7Q93009 1102 aa6.76□□□□□ -1.33
LINC01040-201ENST00000425048 FATE1Q969F0 183 aa6.76□□□□□ -1.33
LINC01040-201ENST00000425048 UHRF1Q96T88 793 aaPredicted RBP6.76□□□□□ -1.33
LINC01040-201ENST00000425048 DMTF1Q9Y222 760 aa6.76□□□□□ -1.33
LINC01040-201ENST00000425048 GSG1L2A8MUP6 293 aa6.75□□□□□ -1.33
LINC01040-201ENST00000425048 ULK1O75385 1050 aa6.75□□□□□ -1.33
LINC01040-201ENST00000425048 GPANK1O95872 356 aa6.75□□□□□ -1.33
LINC01040-201ENST00000425048 BPIP17213 487 aa6.75□□□□□ -1.33
LINC01040-201ENST00000425048 GCSHP23434 173 aa6.75□□□□□ -1.33
LINC01040-201ENST00000425048 SESN3P58005 492 aa6.75□□□□□ -1.33
LINC01040-201ENST00000425048 MRPS35P82673 323 aaKnown RBP6.75□□□□□ -1.33
LINC01040-201ENST00000425048 PAPD7Q5XG87 772 aaKnown RBP6.75□□□□□ -1.33
LINC01040-201ENST00000425048 AFMIDQ63HM1 303 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms