RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 AGAP11Q8TF27 550 aa15.18■□□□□ 0.02
TPM3P9-201ENST00000424846 ACCSQ96QU6 501 aa15.18■□□□□ 0.02
TPM3P9-201ENST00000424846 ECT2Q9H8V3 914 aa15.18■□□□□ 0.02
TPM3P9-201ENST00000424846 LARSQ9P2J5 1176 aaKnown RBP15.18■□□□□ 0.02
TPM3P9-201ENST00000424846 ANAPC7Q9UJX3 599 aa15.18■□□□□ 0.02
TPM3P9-201ENST00000424846 IGF2BP3O00425 579 aaKnown RBP eCLIP15.17■□□□□ 0.02
TPM3P9-201ENST00000424846 GGPS1O95749 300 aa15.17■□□□□ 0.02
TPM3P9-201ENST00000424846 NPR1P16066 1061 aa15.17■□□□□ 0.02
TPM3P9-201ENST00000424846 LDHDQ86WU2 507 aa15.17■□□□□ 0.02
TPM3P9-201ENST00000424846 FITM2Q8N6M3 262 aa15.17■□□□□ 0.02
TPM3P9-201ENST00000424846 MXRA8Q9BRK3 442 aa15.17■□□□□ 0.02
TPM3P9-201ENST00000424846 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.17■□□□□ 0.02
TPM3P9-201ENST00000424846 GTF3C4Q9UKN8 822 aa15.17■□□□□ 0.02
TPM3P9-201ENST00000424846 USP20Q9Y2K6 914 aa15.17■□□□□ 0.02
TPM3P9-201ENST00000424846 USP15Q9Y4E8 981 aaPredicted RBP15.17■□□□□ 0.02
TPM3P9-201ENST00000424846 NFIBO00712 420 aa15.17■□□□□ 0.02
TPM3P9-201ENST00000424846 FSCN2O14926 492 aa15.17■□□□□ 0.02
TPM3P9-201ENST00000424846 C21orf2O43822 256 aa15.17■□□□□ 0.02
TPM3P9-201ENST00000424846 KRT16P08779 473 aa15.17■□□□□ 0.02
TPM3P9-201ENST00000424846 MYO1EQ12965 1108 aa15.17■□□□□ 0.02
TPM3P9-201ENST00000424846 TMEM63BQ5T3F8 832 aa15.17■□□□□ 0.02
TPM3P9-201ENST00000424846 STRIP1Q5VSL9 837 aa15.17■□□□□ 0.02
TPM3P9-201ENST00000424846 C12orf50Q8NA57 414 aaPredicted RBP15.17■□□□□ 0.02
TPM3P9-201ENST00000424846 KCND2Q9NZV8 630 aa15.17■□□□□ 0.02
TPM3P9-201ENST00000424846 COL11A2P13942 1736 aaPredicted RBP15.17■□□□□ 0.02
TPM3P9-201ENST00000424846 GSTA1P08263 222 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 CFHP08603 1231 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 PLS3P13797 630 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 CDC25CP30307 473 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 PDE6CP51160 858 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 CETN1Q12798 172 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 SNRNP35Q16560 246 aaKnown RBP15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 KCTD17Q8N5Z5 321 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 MAGEC3Q8TD91 643 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 CPA5Q8WXQ8 436 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 C9orf72Q96LT7 481 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 RANBP17Q9H2T7 1088 aaKnown RBP15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 NINJ2Q9NZG7 142 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 BRAFP15056 766 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 CDR2Q01850 454 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 DGKZQ13574 1117 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 GALNTL6Q49A17 601 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 LMBRD2Q68DH5 695 aaPredicted RBP15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 TAOK1Q7L7X3 1001 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 ADAM33Q9BZ11 813 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 SCAF8Q9UPN6 1271 aaKnown RBP15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 MROH7Q68CQ1 1323 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 GJB6O95452 261 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 TTC4O95801 387 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 EZRP15311 586 aaKnown RBP15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 NQO1P15559 274 aaKnown RBP15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 RRM1P23921 792 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 CLUL1Q15846 466 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 AOC3Q16853 763 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 TRMT10CQ7L0Y3 403 aaKnown RBP15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 FMNL3Q8IVF7 1028 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 TMEM206Q9H813 350 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 TMX2Q9Y320 296 aa15.16■□□□□ 0.02
TPM3P9-201ENST00000424846 FOXN2P32314 431 aa15.15■□□□□ 0.02
TPM3P9-201ENST00000424846 GTF2BQ00403 316 aa15.15■□□□□ 0.02
TPM3P9-201ENST00000424846 MYBPC2Q14324 1141 aa15.15■□□□□ 0.02
TPM3P9-201ENST00000424846 HP1BP3Q5SSJ5 553 aaPredicted RBP15.15■□□□□ 0.02
TPM3P9-201ENST00000424846 CCDC50Q8IVM0 306 aa15.15■□□□□ 0.02
TPM3P9-201ENST00000424846 SRRM1Q8IYB3 904 aaKnown RBP15.15■□□□□ 0.02
TPM3P9-201ENST00000424846 PARD3BQ8TEW8 1205 aa15.15■□□□□ 0.02
TPM3P9-201ENST00000424846 POMGNT1Q8WZA1 660 aa15.15■□□□□ 0.02
TPM3P9-201ENST00000424846 SPOCK2Q92563 424 aa15.15■□□□□ 0.02
TPM3P9-201ENST00000424846 TAOK3Q9H2K8 898 aa15.15■□□□□ 0.02
TPM3P9-201ENST00000424846 HOMER3Q9NSC5 361 aa15.15■□□□□ 0.02
TPM3P9-201ENST00000424846 STK38LQ9Y2H1 464 aa15.15■□□□□ 0.02
TPM3P9-201ENST00000424846 LTBP4Q8N2S1 1624 aa15.15■□□□□ 0.02
TPM3P9-201ENST00000424846 KRT5P13647 590 aa15.15■□□□□ 0.02
TPM3P9-201ENST00000424846 MRPS9P82933 396 aaKnown RBP15.15■□□□□ 0.02
TPM3P9-201ENST00000424846 SLC39A4Q6P5W5 647 aa15.15■□□□□ 0.02
TPM3P9-201ENST00000424846 FAM47EQ6ZV65 393 aa15.15■□□□□ 0.02
TPM3P9-201ENST00000424846 SEPT12Q8IYM1 358 aa15.15■□□□□ 0.02
TPM3P9-201ENST00000424846 GLIS1Q8NBF1 620 aa15.15■□□□□ 0.02
TPM3P9-201ENST00000424846 GJD4Q96KN9 370 aaPredicted RBP15.15■□□□□ 0.02
TPM3P9-201ENST00000424846 RUNDC3BQ96NL0 473 aa15.15■□□□□ 0.02
TPM3P9-201ENST00000424846 WHRNQ9P202 907 aa15.15■□□□□ 0.02
TPM3P9-201ENST00000424846 ATRNL1Q5VV63 1379 aa15.15■□□□□ 0.02
TPM3P9-201ENST00000424846 P4HA2O15460 535 aa15.14■□□□□ 0.01
TPM3P9-201ENST00000424846 THAP12O43422 761 aa15.14■□□□□ 0.01
TPM3P9-201ENST00000424846 ATP9AO75110 1047 aa15.14■□□□□ 0.01
TPM3P9-201ENST00000424846 P4HBP07237 508 aaKnown RBP15.14■□□□□ 0.01
TPM3P9-201ENST00000424846 MAPK4P31152 587 aa15.14■□□□□ 0.01
TPM3P9-201ENST00000424846 GBP1P32455 592 aa15.14■□□□□ 0.01
TPM3P9-201ENST00000424846 GJC1P36383 396 aa15.14■□□□□ 0.01
TPM3P9-201ENST00000424846 MFAP3P55082 362 aa15.14■□□□□ 0.01
TPM3P9-201ENST00000424846 ACAD10Q6JQN1 1059 aa15.14■□□□□ 0.01
TPM3P9-201ENST00000424846 NSMCE1Q8WV22 266 aa15.14■□□□□ 0.01
TPM3P9-201ENST00000424846 CKAP2Q8WWK9 683 aa15.14■□□□□ 0.01
TPM3P9-201ENST00000424846 BSNDQ8WZ55 320 aa15.14■□□□□ 0.01
TPM3P9-201ENST00000424846 SERPINB12Q96P63 405 aa15.14■□□□□ 0.01
TPM3P9-201ENST00000424846 ROPN1BQ9BZX4 212 aaPredicted RBP15.14■□□□□ 0.01
TPM3P9-201ENST00000424846 DCLK3Q9C098 648 aa15.14■□□□□ 0.01
TPM3P9-201ENST00000424846 ROPN1Q9HAT0 212 aaPredicted RBP15.14■□□□□ 0.01
TPM3P9-201ENST00000424846 SUFUQ9UMX1 484 aa15.14■□□□□ 0.01
TPM3P9-201ENST00000424846 TELO2Q9Y4R8 837 aa15.14■□□□□ 0.01
TPM3P9-201ENST00000424846 ASTN2O75129 1339 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms