RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 PAFAH1B1P43034 410 aa17.81■□□□□ 0.44
CMTM3-202ENST00000424011 LNX1Q8TBB1 728 aaPredicted RBP17.81■□□□□ 0.44
CMTM3-202ENST00000424011 HDAC7Q8WUI4 952 aa17.81■□□□□ 0.44
CMTM3-202ENST00000424011 POP1Q99575 1024 aaKnown RBP17.81■□□□□ 0.44
CMTM3-202ENST00000424011 AGPAT1Q99943 283 aa17.81■□□□□ 0.44
CMTM3-202ENST00000424011 HINFPQ9BQA5 517 aa17.81■□□□□ 0.44
CMTM3-202ENST00000424011 ERAP1Q9NZ08 941 aa17.81■□□□□ 0.44
CMTM3-202ENST00000424011 TRPC6Q9Y210 931 aa17.81■□□□□ 0.44
CMTM3-202ENST00000424011 A0A0B4J269 797 aa17.81■□□□□ 0.44
CMTM3-202ENST00000424011 MYBL2P10244 700 aa17.81■□□□□ 0.44
CMTM3-202ENST00000424011 MRPS25P82663 173 aaKnown RBP17.81■□□□□ 0.44
CMTM3-202ENST00000424011 CALR3Q96L12 384 aaKnown RBP17.81■□□□□ 0.44
CMTM3-202ENST00000424011 MSTO1Q9BUK6 570 aa17.81■□□□□ 0.44
CMTM3-202ENST00000424011 MRPL4Q9BYD3 311 aaKnown RBP17.81■□□□□ 0.44
CMTM3-202ENST00000424011 FAN1Q9Y2M0 1017 aa17.81■□□□□ 0.44
CMTM3-202ENST00000424011 MANSC4A6NHS7 340 aaPredicted RBP17.8■□□□□ 0.44
CMTM3-202ENST00000424011 KIF3CO14782 793 aa17.8■□□□□ 0.44
CMTM3-202ENST00000424011 GH1P01241 217 aa17.8■□□□□ 0.44
CMTM3-202ENST00000424011 TMEM253P0C7T8 217 aa17.8■□□□□ 0.44
CMTM3-202ENST00000424011 TFDP1Q14186 410 aa17.8■□□□□ 0.44
CMTM3-202ENST00000424011 CDCA2Q69YH5 1023 aaPredicted RBP17.8■□□□□ 0.44
CMTM3-202ENST00000424011 CCDC70Q6NSX1 233 aa17.8■□□□□ 0.44
CMTM3-202ENST00000424011 CCNI2Q6ZMN8 369 aaPredicted RBP17.8■□□□□ 0.44
CMTM3-202ENST00000424011 TRIM50Q86XT4 487 aa17.8■□□□□ 0.44
CMTM3-202ENST00000424011 GSPT2Q8IYD1 628 aaKnown RBP17.8■□□□□ 0.44
CMTM3-202ENST00000424011 FAM71AQ8IYT1 594 aa17.8■□□□□ 0.44
CMTM3-202ENST00000424011 SYCE1Q8N0S2 351 aa17.8■□□□□ 0.44
CMTM3-202ENST00000424011 CTNNBL1Q8WYA6 563 aaPredicted RBP17.8■□□□□ 0.44
CMTM3-202ENST00000424011 SEMA4DQ92854 862 aa17.8■□□□□ 0.44
CMTM3-202ENST00000424011 TARS2Q9BW92 718 aaKnown RBP17.8■□□□□ 0.44
CMTM3-202ENST00000424011 PDGFCQ9NRA1 345 aa17.8■□□□□ 0.44
CMTM3-202ENST00000424011 DMGDHQ9UI17 866 aaKnown RBP17.8■□□□□ 0.44
CMTM3-202ENST00000424011 LAMTOR4Q0VGL1 99 aa17.8■□□□□ 0.44
CMTM3-202ENST00000424011 CFAP221Q4G0U5 840 aa17.8■□□□□ 0.44
CMTM3-202ENST00000424011 TAS1R2Q8TE23 839 aa17.8■□□□□ 0.44
CMTM3-202ENST00000424011 SHC3Q92529 594 aa17.8■□□□□ 0.44
CMTM3-202ENST00000424011 GOLPH3Q9H4A6 298 aa17.8■□□□□ 0.44
CMTM3-202ENST00000424011 RBM12Q9NTZ6 932 aaKnown RBP17.8■□□□□ 0.44
CMTM3-202ENST00000424011 RBAKQ9NYW8 714 aaPredicted RBP17.8■□□□□ 0.44
CMTM3-202ENST00000424011 ANKFY1Q9P2R3 1169 aa17.8■□□□□ 0.44
CMTM3-202ENST00000424011 RBM47A0AV96 593 aaKnown RBP17.79■□□□□ 0.44
CMTM3-202ENST00000424011 ZBTB42B2RXF5 422 aa17.79■□□□□ 0.44
CMTM3-202ENST00000424011 ANKRD65E5RJM6 399 aa17.79■□□□□ 0.44
CMTM3-202ENST00000424011 PPFIA4O75335 1185 aa17.79■□□□□ 0.44
CMTM3-202ENST00000424011 TNNI1P19237 187 aa17.79■□□□□ 0.44
CMTM3-202ENST00000424011 GALCP54803 685 aa17.79■□□□□ 0.44
CMTM3-202ENST00000424011 SATB1Q01826 763 aa17.79■□□□□ 0.44
CMTM3-202ENST00000424011 GCNT1Q02742 428 aa17.79■□□□□ 0.44
CMTM3-202ENST00000424011 WDR44Q5JSH3 913 aa17.79■□□□□ 0.44
CMTM3-202ENST00000424011 TAPT1Q6NXT6 567 aa17.79■□□□□ 0.44
CMTM3-202ENST00000424011 C15orf39Q6ZRI6 1047 aa17.79■□□□□ 0.44
CMTM3-202ENST00000424011 RPAINQ86UA6 219 aa17.79■□□□□ 0.44
CMTM3-202ENST00000424011 COPS5Q92905 334 aa17.79■□□□□ 0.44
CMTM3-202ENST00000424011 EMID1Q96A84 441 aaPredicted RBP17.79■□□□□ 0.44
CMTM3-202ENST00000424011 SEPT11Q9NVA2 429 aaKnown RBP17.79■□□□□ 0.44
CMTM3-202ENST00000424011 TLL2Q9Y6L7 1015 aa17.79■□□□□ 0.44
CMTM3-202ENST00000424011 CLDN3O15551 220 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 ASAP2O43150 1006 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 TOM1L1O75674 476 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 MAPK4P31152 587 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 USP8P40818 1118 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 NLRP11P59045 1033 aaKnown RBP17.78■□□□□ 0.44
CMTM3-202ENST00000424011 ARHGAP1Q07960 439 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 MAPK6Q16659 721 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 FAM110CQ1W6H9 321 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 MAMDC4Q6UXC1 1216 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 DPP9Q86TI2 863 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 PPTC7Q8NI37 304 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 HELQQ8TDG4 1101 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 TOPORSQ9NS56 1045 aaPredicted RBP17.78■□□□□ 0.44
CMTM3-202ENST00000424011 C1orf112Q9NSG2 853 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 SUCLA2Q9P2R7 463 aaPredicted RBP17.78■□□□□ 0.44
CMTM3-202ENST00000424011 ANKRD62A6NC57 917 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 IGF2BP3O00425 579 aaKnown RBP eCLIP17.78■□□□□ 0.44
CMTM3-202ENST00000424011 CES2O00748 559 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 SLC10A3P09131 477 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 ACOT2P49753 483 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 SLC7A5Q01650 507 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 DRP2Q13474 957 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 PRPF4BQ13523 1007 aaKnown RBP17.78■□□□□ 0.44
CMTM3-202ENST00000424011 MAP9Q49MG5 647 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 ZNF484Q5JVG2 852 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 GPR142Q7Z601 462 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 LRRC57Q8N9N7 239 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 RNF149Q8NC42 400 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 RFFLQ8WZ73 363 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 TAF4BQ92750 862 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 KREMEN1Q96MU8 473 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 FAM107BQ9H098 131 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 CCDC113Q9H0I3 377 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.78■□□□□ 0.44
CMTM3-202ENST00000424011 ADGRA2Q96PE1 1338 aa17.78■□□□□ 0.44
CMTM3-202ENST00000424011 SRGAP2CP0DJJ0 459 aa17.77■□□□□ 0.44
CMTM3-202ENST00000424011 AP3M2P53677 418 aa17.77■□□□□ 0.44
CMTM3-202ENST00000424011 ZACNQ401N2 412 aa17.77■□□□□ 0.44
CMTM3-202ENST00000424011 DNAJC21Q5F1R6 531 aaKnown RBP17.77■□□□□ 0.44
CMTM3-202ENST00000424011 MICALL1Q8N3F8 863 aa17.77■□□□□ 0.44
CMTM3-202ENST00000424011 SMC1BQ8NDV3 1235 aa17.77■□□□□ 0.44
CMTM3-202ENST00000424011 TPCN2Q8NHX9 752 aa17.77■□□□□ 0.44
CMTM3-202ENST00000424011 FAM71BQ8TC56 605 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms