RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 ADAM9Q13443 819 aa6.74□□□□□ -1.33
LINC00458-201ENST00000423442 ICAM4Q14773 271 aa6.74□□□□□ -1.33
LINC00458-201ENST00000423442 CR1LQ2VPA4 569 aa6.74□□□□□ -1.33
LINC00458-201ENST00000423442 C20orf194Q5TEA3 1177 aa6.74□□□□□ -1.33
LINC00458-201ENST00000423442 VHLLQ6RSH7 139 aa6.74□□□□□ -1.33
LINC00458-201ENST00000423442 FAM126BQ8IXS8 530 aa6.74□□□□□ -1.33
LINC00458-201ENST00000423442 AMOTL1Q8IY63 956 aa6.74□□□□□ -1.33
LINC00458-201ENST00000423442 MAGEB6Q8N7X4 407 aa6.74□□□□□ -1.33
LINC00458-201ENST00000423442 OR6P1Q8NGX9 317 aa6.74□□□□□ -1.33
LINC00458-201ENST00000423442 TGFBRAP1Q8WUH2 860 aa6.74□□□□□ -1.33
LINC00458-201ENST00000423442 DNAJC2Q99543 621 aaKnown RBP6.74□□□□□ -1.33
LINC00458-201ENST00000423442 AATFQ9NY61 560 aaKnown RBP eCLIP6.74□□□□□ -1.33
LINC00458-201ENST00000423442 ZHX2Q9Y6X8 837 aa6.74□□□□□ -1.33
LINC00458-201ENST00000423442 RPTORQ8N122 1335 aa6.74□□□□□ -1.33
LINC00458-201ENST00000423442 MYO5AQ9Y4I1 1855 aaKnown RBP6.73□□□□□ -1.33
LINC00458-201ENST00000423442 DDTLA6NHG4 134 aaPredicted RBP6.73□□□□□ -1.33
LINC00458-201ENST00000423442 GOLIM4O00461 696 aa6.73□□□□□ -1.33
LINC00458-201ENST00000423442 CXCL11O14625 94 aa6.73□□□□□ -1.33
LINC00458-201ENST00000423442 LAMTOR5O43504 91 aa6.73□□□□□ -1.33
LINC00458-201ENST00000423442 CAPN2P17655 700 aa6.73□□□□□ -1.33
LINC00458-201ENST00000423442 TACR2P21452 398 aa6.73□□□□□ -1.33
LINC00458-201ENST00000423442 SLC6A11P48066 632 aa6.73□□□□□ -1.33
LINC00458-201ENST00000423442 MOGSQ13724 837 aa6.73□□□□□ -1.33
LINC00458-201ENST00000423442 GTF2IRD2BQ6EKJ0 949 aa6.73□□□□□ -1.33
LINC00458-201ENST00000423442 GTF2IRD2Q86UP8 949 aa6.73□□□□□ -1.33
LINC00458-201ENST00000423442 ZFPM1Q8IX07 1006 aa6.73□□□□□ -1.33
LINC00458-201ENST00000423442 SCYL3Q8IZE3 742 aa6.73□□□□□ -1.33
LINC00458-201ENST00000423442 ZNF654Q8IZM8 581 aa6.73□□□□□ -1.33
LINC00458-201ENST00000423442 BVESQ8NE79 360 aa6.73□□□□□ -1.33
LINC00458-201ENST00000423442 FRS2Q8WU20 508 aa6.73□□□□□ -1.33
LINC00458-201ENST00000423442 KISS1RQ969F8 398 aaPredicted RBP6.73□□□□□ -1.33
LINC00458-201ENST00000423442 SHDQ96IW2 340 aa6.73□□□□□ -1.33
LINC00458-201ENST00000423442 OSBPL5Q9H0X9 879 aaPredicted RBP6.73□□□□□ -1.33
LINC00458-201ENST00000423442 RWDD1Q9H446 243 aaPredicted RBP6.73□□□□□ -1.33
LINC00458-201ENST00000423442 DCTPP1Q9H773 170 aa6.73□□□□□ -1.33
LINC00458-201ENST00000423442 AS3MTQ9HBK9 375 aa6.73□□□□□ -1.33
LINC00458-201ENST00000423442 HERC5Q9UII4 1024 aaKnown RBP6.73□□□□□ -1.33
LINC00458-201ENST00000423442 ZNF112Q9UJU3 913 aa6.73□□□□□ -1.33
LINC00458-201ENST00000423442 LAMA2P24043 3122 aaKnown RBP6.72□□□□□ -1.33
LINC00458-201ENST00000423442 MYH1P12882 1939 aa6.72□□□□□ -1.33
LINC00458-201ENST00000423442 RPAP1Q9BWH6 1393 aaPredicted RBP6.72□□□□□ -1.33
LINC00458-201ENST00000423442 TNPO2O14787 897 aaKnown RBP6.72□□□□□ -1.33
LINC00458-201ENST00000423442 ERC2O15083 957 aa6.72□□□□□ -1.33
LINC00458-201ENST00000423442 SLPIP03973 132 aa6.72□□□□□ -1.33
LINC00458-201ENST00000423442 ZNF28P17035 718 aa6.72□□□□□ -1.33
LINC00458-201ENST00000423442 ATP5JP18859 108 aa6.72□□□□□ -1.33
LINC00458-201ENST00000423442 PABPC4Q13310 644 aaKnown RBP eCLIP6.72□□□□□ -1.33
LINC00458-201ENST00000423442 GADL1Q6ZQY3 521 aa6.72□□□□□ -1.33
LINC00458-201ENST00000423442 CEP68Q76N32 757 aa6.72□□□□□ -1.33
LINC00458-201ENST00000423442 MAPKAPK5Q8IW41 473 aa6.72□□□□□ -1.33
LINC00458-201ENST00000423442 MIGA1Q8NAN2 632 aa6.72□□□□□ -1.33
LINC00458-201ENST00000423442 NPLOC4Q8TAT6 608 aa6.72□□□□□ -1.33
LINC00458-201ENST00000423442 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.72□□□□□ -1.33
LINC00458-201ENST00000423442 GPRASP2Q96D09 838 aa6.72□□□□□ -1.33
LINC00458-201ENST00000423442 ZSWIM3Q96MP5 696 aa6.72□□□□□ -1.33
LINC00458-201ENST00000423442 PARK7Q99497 189 aaKnown RBP6.72□□□□□ -1.33
LINC00458-201ENST00000423442 APBA2Q99767 749 aa6.72□□□□□ -1.33
LINC00458-201ENST00000423442 CRNKL1Q9BZJ0 848 aaKnown RBP6.72□□□□□ -1.33
LINC00458-201ENST00000423442 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.72□□□□□ -1.33
LINC00458-201ENST00000423442 BOLA2Q9H3K6 86 aa6.72□□□□□ -1.33
LINC00458-201ENST00000423442 CABP5Q9NP86 173 aa6.72□□□□□ -1.33
LINC00458-201ENST00000423442 PIH1D3Q9NQM4 214 aaKnown RBP6.72□□□□□ -1.33
LINC00458-201ENST00000423442 ECHDC1Q9NTX5 307 aa6.72□□□□□ -1.33
LINC00458-201ENST00000423442 PAG1Q9NWQ8 432 aa6.72□□□□□ -1.33
LINC00458-201ENST00000423442 TSC22D4Q9Y3Q8 395 aa6.72□□□□□ -1.33
LINC00458-201ENST00000423442 DDX60LQ5H9U9 1706 aaKnown RBP6.71□□□□□ -1.34
LINC00458-201ENST00000423442 C9orf118A6NHY6 69 aa6.71□□□□□ -1.34
LINC00458-201ENST00000423442 ARNTLO00327 626 aa6.71□□□□□ -1.34
LINC00458-201ENST00000423442 CYP1A1P04798 512 aaPredicted RBP6.71□□□□□ -1.34
LINC00458-201ENST00000423442 ASNSP08243 561 aa6.71□□□□□ -1.34
LINC00458-201ENST00000423442 HMGA2P52926 109 aa6.71□□□□□ -1.34
LINC00458-201ENST00000423442 RRP1P56182 461 aaKnown RBP6.71□□□□□ -1.34
LINC00458-201ENST00000423442 RHBDL3P58872 404 aa6.71□□□□□ -1.34
LINC00458-201ENST00000423442 FAM109BQ6ICB4 259 aaPredicted RBP6.71□□□□□ -1.34
LINC00458-201ENST00000423442 POMZP3Q6PJE2 187 aa6.71□□□□□ -1.34
LINC00458-201ENST00000423442 TRIM59Q8IWR1 403 aa6.71□□□□□ -1.34
LINC00458-201ENST00000423442 FAM169BQ8N8A8 192 aa6.71□□□□□ -1.34
LINC00458-201ENST00000423442 SMCR8Q8TEV9 937 aaPredicted RBP6.71□□□□□ -1.34
LINC00458-201ENST00000423442 PPP1R14AQ96A00 147 aa6.71□□□□□ -1.34
LINC00458-201ENST00000423442 MBD6Q96DN6 1003 aa6.71□□□□□ -1.34
LINC00458-201ENST00000423442 SPATA32Q96LK8 384 aa6.71□□□□□ -1.34
LINC00458-201ENST00000423442 C11orf49Q9H6J7 331 aa6.71□□□□□ -1.34
LINC00458-201ENST00000423442 CD248Q9HCU0 757 aa6.71□□□□□ -1.34
LINC00458-201ENST00000423442 DDX4Q9NQI0 724 aaKnown RBP6.71□□□□□ -1.34
LINC00458-201ENST00000423442 CYP26B1Q9NR63 512 aa6.71□□□□□ -1.34
LINC00458-201ENST00000423442 TMOD4Q9NZQ9 345 aa6.71□□□□□ -1.34
LINC00458-201ENST00000423442 SAP30BPQ9UHR5 308 aaKnown RBP6.71□□□□□ -1.34
LINC00458-201ENST00000423442 TMEFF2Q9UIK5 374 aaPredicted RBP6.71□□□□□ -1.34
LINC00458-201ENST00000423442 TIMM13Q9Y5L4 95 aaPredicted RBP6.71□□□□□ -1.34
LINC00458-201ENST00000423442 PRUNE2Q8WUY3 3088 aa6.71□□□□□ -1.34
LINC00458-201ENST00000423442 DOCK3Q8IZD9 2030 aa6.71□□□□□ -1.34
LINC00458-201ENST00000423442 NPEPPSL1A6NEC2 478 aa6.7□□□□□ -1.34
LINC00458-201ENST00000423442 TRIM75PA6NK02 468 aa6.7□□□□□ -1.34
LINC00458-201ENST00000423442 C19orf81C9J6K1 198 aa6.7□□□□□ -1.34
LINC00458-201ENST00000423442 NOP56O00567 594 aaKnown RBP6.7□□□□□ -1.34
LINC00458-201ENST00000423442 GPR42O15529 346 aa6.7□□□□□ -1.34
LINC00458-201ENST00000423442 APPP05067 770 aa6.7□□□□□ -1.34
LINC00458-201ENST00000423442 PDE6AP16499 860 aa6.7□□□□□ -1.34
LINC00458-201ENST00000423442 BCL6P41182 706 aa6.7□□□□□ -1.34
LINC00458-201ENST00000423442 GDF5P43026 501 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms