RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 SRFP11831 508 aa17.79■□□□□ 0.44
COL18A1-205ENST00000423214 NBL1P41271 181 aa17.79■□□□□ 0.44
COL18A1-205ENST00000423214 RBM25P49756 843 aaKnown RBP17.79■□□□□ 0.44
COL18A1-205ENST00000423214 EFNA5P52803 228 aa17.79■□□□□ 0.44
COL18A1-205ENST00000423214 LILRA6Q6PI73 481 aa17.79■□□□□ 0.44
COL18A1-205ENST00000423214 CCDC105Q8IYK2 499 aa17.79■□□□□ 0.44
COL18A1-205ENST00000423214 KIFC3Q9BVG8 833 aa17.79■□□□□ 0.44
COL18A1-205ENST00000423214 RAB34Q9BZG1 259 aa17.79■□□□□ 0.44
COL18A1-205ENST00000423214 BHMT2Q9H2M3 363 aa17.79■□□□□ 0.44
COL18A1-205ENST00000423214 CA14Q9ULX7 337 aa17.79■□□□□ 0.44
COL18A1-205ENST00000423214 PTPRZ1P23471 2315 aaPredicted RBP17.79■□□□□ 0.44
COL18A1-205ENST00000423214 PATJQ8NI35 1801 aa17.79■□□□□ 0.44
COL18A1-205ENST00000423214 NOTCH4Q99466 2003 aa17.79■□□□□ 0.44
COL18A1-205ENST00000423214 PHLPP2Q6ZVD8 1323 aa17.78■□□□□ 0.44
COL18A1-205ENST00000423214 PAPLNO95428 1278 aa17.78■□□□□ 0.44
COL18A1-205ENST00000423214 C8AP07357 584 aa17.78■□□□□ 0.44
COL18A1-205ENST00000423214 NPR3P17342 541 aa17.78■□□□□ 0.44
COL18A1-205ENST00000423214 FSHRP23945 695 aa17.78■□□□□ 0.44
COL18A1-205ENST00000423214 TRAPPC10P48553 1259 aa17.78■□□□□ 0.44
COL18A1-205ENST00000423214 FXR2P51116 673 aaKnown RBP eCLIP17.78■□□□□ 0.441e-6■■■■■ 30.2
COL18A1-205ENST00000423214 C8orf34Q49A92 452 aa17.78■□□□□ 0.44
COL18A1-205ENST00000423214 PPM1LQ5SGD2 360 aa17.78■□□□□ 0.44
COL18A1-205ENST00000423214 ATF7IP2Q5U623 682 aa17.78■□□□□ 0.44
COL18A1-205ENST00000423214 EEF1DP3Q658K8 133 aa17.78■□□□□ 0.44
COL18A1-205ENST00000423214 SNX29Q8TEQ0 813 aa17.78■□□□□ 0.44
COL18A1-205ENST00000423214 WNT16Q9UBV4 365 aa17.78■□□□□ 0.44
COL18A1-205ENST00000423214 LRWD1Q9UFC0 647 aa17.78■□□□□ 0.44
COL18A1-205ENST00000423214 USP20Q9Y2K6 914 aa17.78■□□□□ 0.44
COL18A1-205ENST00000423214 STK24Q9Y6E0 443 aa17.78■□□□□ 0.44
COL18A1-205ENST00000423214 SPTBN4Q9H254 2564 aa17.77■□□□□ 0.44
COL18A1-205ENST00000423214 PRR23AA6NEV1 266 aa17.77■□□□□ 0.44
COL18A1-205ENST00000423214 XYLBO75191 536 aa17.77■□□□□ 0.44
COL18A1-205ENST00000423214 EDN1P05305 212 aa17.77■□□□□ 0.44
COL18A1-205ENST00000423214 HNRNPA1P09651 372 aaKnown RBP eCLIP17.77■□□□□ 0.44
COL18A1-205ENST00000423214 LAMP2P13473 410 aa17.77■□□□□ 0.44
COL18A1-205ENST00000423214 NBR1Q14596 966 aa17.77■□□□□ 0.44
COL18A1-205ENST00000423214 GLRA4Q5JXX5 417 aa17.77■□□□□ 0.44
COL18A1-205ENST00000423214 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.77■□□□□ 0.44
COL18A1-205ENST00000423214 ASCL5Q7RTU5 278 aa17.77■□□□□ 0.44
COL18A1-205ENST00000423214 FRMD5Q7Z6J6 570 aa17.77■□□□□ 0.44
COL18A1-205ENST00000423214 SLC44A3Q8N4M1 653 aa17.77■□□□□ 0.44
COL18A1-205ENST00000423214 DTWD2Q8NBA8 298 aa17.77■□□□□ 0.44
COL18A1-205ENST00000423214 FBXO18Q8NFZ0 1043 aa17.77■□□□□ 0.44
COL18A1-205ENST00000423214 ZSCAN31Q96LW9 406 aaPredicted RBP17.77■□□□□ 0.44
COL18A1-205ENST00000423214 CLSTN3Q9BQT9 956 aa17.77■□□□□ 0.44
COL18A1-205ENST00000423214 DAXXQ9UER7 740 aaPredicted RBP17.77■□□□□ 0.44
COL18A1-205ENST00000423214 POLIQ9UNA4 740 aa17.77■□□□□ 0.44
COL18A1-205ENST00000423214 KIAA1024Q9UPX6 916 aa17.77■□□□□ 0.44
COL18A1-205ENST00000423214 DMDP11532 3685 aa17.77■□□□□ 0.43
COL18A1-205ENST00000423214 KRBA1A5PL33 1030 aa17.76■□□□□ 0.43
COL18A1-205ENST00000423214 PI15O43692 258 aa17.76■□□□□ 0.43
COL18A1-205ENST00000423214 HOXA9P31269 272 aa17.76■□□□□ 0.43
COL18A1-205ENST00000423214 HTR4Q13639 388 aa17.76■□□□□ 0.43
COL18A1-205ENST00000423214 ANGPT1Q15389 498 aa17.76■□□□□ 0.43
COL18A1-205ENST00000423214 NAB2Q15742 525 aa17.76■□□□□ 0.43
COL18A1-205ENST00000423214 GRASPQ7Z6J2 395 aaPredicted RBP17.76■□□□□ 0.43
COL18A1-205ENST00000423214 LNX1Q8TBB1 728 aaPredicted RBP17.76■□□□□ 0.43
COL18A1-205ENST00000423214 GPR152Q8TDT2 470 aa17.76■□□□□ 0.43
COL18A1-205ENST00000423214 NKD2Q969F2 451 aaPredicted RBP17.76■□□□□ 0.43
COL18A1-205ENST00000423214 UROC1Q96N76 676 aa17.76■□□□□ 0.43
COL18A1-205ENST00000423214 TBC1D17Q9HA65 648 aa17.76■□□□□ 0.43
COL18A1-205ENST00000423214 SH2B1Q9NRF2 756 aaPredicted RBP17.76■□□□□ 0.43
COL18A1-205ENST00000423214 DDX19AQ9NUU7 478 aaKnown RBP17.76■□□□□ 0.43
COL18A1-205ENST00000423214 ZFP37Q9Y6Q3 630 aaPredicted RBP17.76■□□□□ 0.43
COL18A1-205ENST00000423214 NUMBLQ9Y6R0 609 aa17.76■□□□□ 0.43
COL18A1-205ENST00000423214 CCDC169A6NNP5 214 aa17.75■□□□□ 0.43
COL18A1-205ENST00000423214 TMEM189-UBE2V1I3L0A0 370 aa17.75■□□□□ 0.43
COL18A1-205ENST00000423214 K7ERI5 159 aa17.75■□□□□ 0.43
COL18A1-205ENST00000423214 CCL16O15467 120 aa17.75■□□□□ 0.43
COL18A1-205ENST00000423214 B3GAT3O94766 335 aa17.75■□□□□ 0.43
COL18A1-205ENST00000423214 YARSP54577 528 aaKnown RBP17.75■□□□□ 0.43
COL18A1-205ENST00000423214 DMP1Q13316 513 aaPredicted RBP17.75■□□□□ 0.43
COL18A1-205ENST00000423214 ECM1Q16610 540 aa17.75■□□□□ 0.43
COL18A1-205ENST00000423214 ZNF568Q3ZCX4 644 aa17.75■□□□□ 0.43
COL18A1-205ENST00000423214 SLC7A14Q8TBB6 771 aa17.75■□□□□ 0.43
COL18A1-205ENST00000423214 CCDC94Q9BW85 323 aaPredicted RBP17.75■□□□□ 0.43
COL18A1-205ENST00000423214 CXCL16Q9H2A7 254 aa17.75■□□□□ 0.43
COL18A1-205ENST00000423214 POLD4Q9HCU8 107 aa17.75■□□□□ 0.43
COL18A1-205ENST00000423214 ARHGEF3Q9NR81 526 aa17.75■□□□□ 0.43
COL18A1-205ENST00000423214 TOPORSQ9NS56 1045 aaPredicted RBP17.75■□□□□ 0.43
COL18A1-205ENST00000423214 ANHXE9PGG2 379 aa17.74■□□□□ 0.43
COL18A1-205ENST00000423214 TRAPPC3O43617 180 aa17.74■□□□□ 0.43
COL18A1-205ENST00000423214 PEX3P56589 373 aa17.74■□□□□ 0.43
COL18A1-205ENST00000423214 NT5DC1Q5TFE4 455 aa17.74■□□□□ 0.43
COL18A1-205ENST00000423214 KRT79Q5XKE5 535 aa17.74■□□□□ 0.43
COL18A1-205ENST00000423214 MTSS1LQ765P7 747 aa17.74■□□□□ 0.43
COL18A1-205ENST00000423214 PPP1R10Q96QC0 940 aaKnown RBP17.74■□□□□ 0.43
COL18A1-205ENST00000423214 MTRRQ9UBK8 725 aa17.74■□□□□ 0.43
COL18A1-205ENST00000423214 CDH7Q9ULB5 785 aa17.74■□□□□ 0.43
COL18A1-205ENST00000423214 TNFSF13BQ9Y275 285 aa17.74■□□□□ 0.43
COL18A1-205ENST00000423214 ANK1P16157 1881 aa17.73■□□□□ 0.43
COL18A1-205ENST00000423214 ADAM12O43184 909 aa17.73■□□□□ 0.43
COL18A1-205ENST00000423214 OR1D2P34982 312 aa17.73■□□□□ 0.43
COL18A1-205ENST00000423214 CLCNKBP51801 687 aa17.73■□□□□ 0.43
COL18A1-205ENST00000423214 NTHL1P78549 312 aa17.73■□□□□ 0.43
COL18A1-205ENST00000423214 PTGDRQ13258 359 aa17.73■□□□□ 0.43
COL18A1-205ENST00000423214 PDIA5Q14554 519 aa17.73■□□□□ 0.43
COL18A1-205ENST00000423214 AXDND1Q5T1B0 1012 aaPredicted RBP17.73■□□□□ 0.43
COL18A1-205ENST00000423214 IGSF22Q8N9C0 903 aa17.73■□□□□ 0.43
COL18A1-205ENST00000423214 ST13P5Q8NFI4 369 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms