RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 TUSC3Q13454 348 aa10.56□□□□□ -0.72
HERC3-204ENST00000422770 CAMK1Q14012 370 aa10.56□□□□□ -0.72
HERC3-204ENST00000422770 AAK1Q2M2I8 961 aa10.56□□□□□ -0.72
HERC3-204ENST00000422770 KIAA1841Q6NSI8 718 aa10.56□□□□□ -0.72
HERC3-204ENST00000422770 ZPBP2Q6X784 338 aa10.56□□□□□ -0.72
HERC3-204ENST00000422770 STXBP4Q6ZWJ1 553 aa10.56□□□□□ -0.72
HERC3-204ENST00000422770 COLGALT2Q8IYK4 626 aa10.56□□□□□ -0.72
HERC3-204ENST00000422770 POMGNT1Q8WZA1 660 aa10.56□□□□□ -0.72
HERC3-204ENST00000422770 SYAP1Q96A49 352 aaPredicted RBP10.56□□□□□ -0.72
HERC3-204ENST00000422770 ACCSQ96QU6 501 aa10.56□□□□□ -0.72
HERC3-204ENST00000422770 COLEC11Q9BWP8 271 aa10.56□□□□□ -0.72
HERC3-204ENST00000422770 NUP62CLQ9H1M0 184 aa10.56□□□□□ -0.72
HERC3-204ENST00000422770 CXCL16Q9H2A7 254 aa10.56□□□□□ -0.72
HERC3-204ENST00000422770 MAGEF1Q9HAY2 307 aa10.56□□□□□ -0.72
HERC3-204ENST00000422770 COG5Q9UP83 839 aa10.56□□□□□ -0.72
HERC3-204ENST00000422770 VCANP13611 3396 aa10.56□□□□□ -0.72
HERC3-204ENST00000422770 PLXNA3P51805 1871 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 ZMYM2Q9UBW7 1377 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 HIDE1A8MVS5 230 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 TISP43B9A030 160 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 ANKRD63C9JTQ0 380 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 H3BQ06 376 aaPredicted RBP10.55□□□□□ -0.72
HERC3-204ENST00000422770 PTGESO14684 152 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 LINC01565O15544 149 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 TADA2AO75478 443 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 PRPF6O94906 941 aaKnown RBP10.55□□□□□ -0.72
HERC3-204ENST00000422770 URODP06132 367 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 SRGAP2BP0DMP2 458 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 CXCL8P10145 99 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 PROZP22891 400 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 TNFSF9P41273 254 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 KCNQ1P51787 676 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 GTF2BQ00403 316 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 PPP2R3AQ06190 1150 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 SPAG1Q07617 926 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 DSC1Q08554 894 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 HSP90AA2PQ14568 343 aaPredicted RBP10.55□□□□□ -0.72
HERC3-204ENST00000422770 SKOR2Q2VWA4 1001 aaPredicted RBP10.55□□□□□ -0.72
HERC3-204ENST00000422770 CCDC183Q5T5S1 534 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 PDE12Q6L8Q7 609 aaKnown RBP10.55□□□□□ -0.72
HERC3-204ENST00000422770 ZNF720Q7Z2F6 126 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 DDX53Q86TM3 631 aaKnown RBP10.55□□□□□ -0.72
HERC3-204ENST00000422770 CEP57Q86XR8 500 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 MAP4K3Q8IVH8 894 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 HPS3Q969F9 1004 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 HVCN1Q96D96 273 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 SNX27Q96L92 541 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 TRIM9Q9C026 710 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 GZF1Q9H116 711 aaPredicted RBP10.55□□□□□ -0.72
HERC3-204ENST00000422770 CLSTN2Q9H4D0 955 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 RPF1Q9H9Y2 349 aaKnown RBP10.55□□□□□ -0.72
HERC3-204ENST00000422770 GOLGA2P5Q9HBQ8 144 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 PTPRHQ9HD43 1115 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 NGRNQ9NPE2 291 aaKnown RBP10.55□□□□□ -0.72
HERC3-204ENST00000422770 EXOC1Q9NV70 894 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 KBTBD4Q9NVX7 518 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 HPSEQ9Y251 543 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 PCDHB13Q9Y5F0 798 aa10.55□□□□□ -0.72
HERC3-204ENST00000422770 SMIM28A0A1B0GU29 152 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 OGTO15294 1046 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 INPPL1O15357 1258 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 SLFN14P0C7P3 912 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 GLUD2P49448 558 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 CASP5P51878 434 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 MCL1Q07820 350 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 CUL4BQ13620 913 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 ALCAMQ13740 583 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 FAM26FQ5R3K3 315 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 L1TD1Q5T7N2 865 aaKnown RBP10.54□□□□□ -0.72
HERC3-204ENST00000422770 SLFN12LQ6IEE8 588 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 GLYCTKQ8IVS8 523 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 NELFCDQ8IXH7 590 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 FMR1NBQ8N0W7 255 aaPredicted RBP10.54□□□□□ -0.72
HERC3-204ENST00000422770 GSTCDQ8NEC7 633 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 ATXN2LQ8WWM7 1075 aaKnown RBP10.54□□□□□ -0.72
HERC3-204ENST00000422770 PABPC5Q96DU9 382 aaKnown RBP10.54□□□□□ -0.72
HERC3-204ENST00000422770 B3GALT6Q96L58 329 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 FIZ1Q96SL8 496 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 PAAF1Q9BRP4 392 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 APOL5Q9BWW9 433 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 COL25A1Q9BXS0 654 aaPredicted RBP10.54□□□□□ -0.72
HERC3-204ENST00000422770 FGFBP2Q9BYJ0 223 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 HAPLN2Q9GZV7 340 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 ZBP1Q9H171 429 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 IKZF4Q9H2S9 585 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 OLFML3Q9NRN5 406 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 MRPL17Q9NRX2 175 aaKnown RBP10.54□□□□□ -0.72
HERC3-204ENST00000422770 SLC38A7Q9NVC3 462 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 MARCH5Q9NX47 278 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 TMEM63CQ9P1W3 806 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 ADAM28Q9UKQ2 775 aa10.54□□□□□ -0.72
HERC3-204ENST00000422770 BARX2Q9UMQ3 279 aaPredicted RBP10.54□□□□□ -0.72
HERC3-204ENST00000422770 VWA8A3KMH1 1905 aa10.53□□□□□ -0.72
HERC3-204ENST00000422770 FAM237AA0A1B0GTK4 181 aa10.53□□□□□ -0.72
HERC3-204ENST00000422770 C2orf71A6NGG8 1288 aa10.53□□□□□ -0.72
HERC3-204ENST00000422770 ABLIM1O14639 778 aa10.53□□□□□ -0.72
HERC3-204ENST00000422770 FSCN2O14926 492 aa10.53□□□□□ -0.72
HERC3-204ENST00000422770 NCK2O43639 380 aa10.53□□□□□ -0.72
HERC3-204ENST00000422770 ACTN4O43707 911 aaKnown RBP10.53□□□□□ -0.72
HERC3-204ENST00000422770 KIF4AO95239 1232 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms