RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 STRIP2Q9ULQ0 834 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 A0A1W2PQC6 194 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 TUBBP07437 444 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 FMO5P49326 533 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 KLK7P49862 253 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 KCNA1Q09470 495 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 CLUL1Q15846 466 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 NT5DC1Q5TFE4 455 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 IQSEC1Q6DN90 963 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 IFT20Q8IY31 132 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 KCTD6Q8NC69 237 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 APPL2Q8NEU8 664 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 MAGOHBQ96A72 148 aaKnown RBP10.4□□□□□ -0.74
CMSS1-201ENST00000421999 ZWILCHQ9H900 591 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 VPS37BQ9H9H4 285 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 SLC38A7Q9NVC3 462 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 SLC8A2Q9UPR5 921 aa10.4□□□□□ -0.74
CMSS1-201ENST00000421999 UBR3Q6ZT12 1888 aa10.4□□□□□ -0.75
CMSS1-201ENST00000421999 IGLV3-22A0A075B6J6 115 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 CCDC85CA6NKD9 419 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 TOMM70O94826 608 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 FTCDO95954 541 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 CCNE2O96020 404 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 ELNP15502 786 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 MAN1A1P33908 653 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 GRIK1P39086 918 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 KRT17Q04695 432 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 UGCGQ16739 394 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 CBWD2Q8IUF1 395 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 SPATA2LQ8IUW3 424 aaPredicted RBP10.39□□□□□ -0.75
CMSS1-201ENST00000421999 HINFPQ9BQA5 517 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 DPH5Q9H2P9 285 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 OLFML3Q9NRN5 406 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 ANAPC7Q9UJX3 599 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 SOWAHBA6NEL2 793 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 RIOK3O14730 519 aaKnown RBP10.39□□□□□ -0.75
CMSS1-201ENST00000421999 SLC16A3O15427 465 aaKnown RBP10.39□□□□□ -0.75
CMSS1-201ENST00000421999 OPA1O60313 960 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 NAMPTP43490 491 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 PPARDQ03181 441 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 SGO2Q562F6 1265 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 C1orf186Q6ZWK4 172 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 TTC39CQ8N584 583 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 SIK2Q9H0K1 926 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 NR2E3Q9Y5X4 410 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 MAD1L1Q9Y6D9 718 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 M0R2N6 131 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 ZC3H11AO75152 810 aaKnown RBP eCLIP10.39□□□□□ -0.75
CMSS1-201ENST00000421999 CD4P01730 458 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 LGALS2P05162 132 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 SDC4P31431 198 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 PSMC1P62191 440 aaKnown RBP10.39□□□□□ -0.75
CMSS1-201ENST00000421999 TUBB2AQ13885 445 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 GRIK4Q16099 956 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 CCDC170Q8IYT3 715 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 SLC35F6Q8N357 371 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 GDAP1L1Q96MZ0 367 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 DEFB118Q96PH6 123 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 TUBB2BQ9BVA1 445 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 DDX41Q9UJV9 622 aaKnown RBP10.39□□□□□ -0.75
CMSS1-201ENST00000421999 STAP1Q9ULZ2 295 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 ZNF500O60304 480 aaPredicted RBP10.39□□□□□ -0.75
CMSS1-201ENST00000421999 EPHB1P54762 984 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 MTF1Q14872 753 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 MGAT5BQ3V5L5 792 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 RNF219Q5W0B1 726 aaPredicted RBP10.39□□□□□ -0.75
CMSS1-201ENST00000421999 CEP128Q6ZU80 1094 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 DNAJC19Q96DA6 116 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 SEPT5Q99719 369 aaPredicted RBP10.39□□□□□ -0.75
CMSS1-201ENST00000421999 FRMPD4Q14CM0 1322 aa10.39□□□□□ -0.75
CMSS1-201ENST00000421999 ERICH4A6NGS2 130 aa10.38□□□□□ -0.75
CMSS1-201ENST00000421999 SGK1O00141 431 aa10.38□□□□□ -0.75
CMSS1-201ENST00000421999 GIPC1O14908 333 aa10.38□□□□□ -0.75
CMSS1-201ENST00000421999 AP5Z1O43299 807 aa10.38□□□□□ -0.75
CMSS1-201ENST00000421999 MSCO60682 206 aa10.38□□□□□ -0.75
CMSS1-201ENST00000421999 AKAP3O75969 853 aa10.38□□□□□ -0.75
CMSS1-201ENST00000421999 STAMBPO95630 424 aa10.38□□□□□ -0.75
CMSS1-201ENST00000421999 CLTAP09496 248 aa10.38□□□□□ -0.75
CMSS1-201ENST00000421999 CASP5P51878 434 aa10.38□□□□□ -0.75
CMSS1-201ENST00000421999 LAMTOR4Q0VGL1 99 aa10.38□□□□□ -0.75
CMSS1-201ENST00000421999 RPUSD2Q8IZ73 545 aaKnown RBP10.38□□□□□ -0.75
CMSS1-201ENST00000421999 ATRIPQ8WXE1 791 aa10.38□□□□□ -0.75
CMSS1-201ENST00000421999 CHP1Q99653 195 aa10.38□□□□□ -0.75
CMSS1-201ENST00000421999 RAB17Q9H0T7 212 aa10.38□□□□□ -0.75
CMSS1-201ENST00000421999 PCSK1NQ9UHG2 260 aa10.38□□□□□ -0.75
CMSS1-201ENST00000421999 COL5A3P25940 1745 aaPredicted RBP10.38□□□□□ -0.75
CMSS1-201ENST00000421999 PIK3R2O00459 728 aa10.38□□□□□ -0.75
CMSS1-201ENST00000421999 RECQLP46063 649 aaPredicted RBP10.38□□□□□ -0.75
CMSS1-201ENST00000421999 SNX1Q13596 522 aa10.38□□□□□ -0.75
CMSS1-201ENST00000421999 MFSD10Q14728 455 aa10.38□□□□□ -0.75
CMSS1-201ENST00000421999 BTBD8Q5XKL5 378 aa10.38□□□□□ -0.75
CMSS1-201ENST00000421999 CC2D1AQ6P1N0 951 aaPredicted RBP10.38□□□□□ -0.75
CMSS1-201ENST00000421999 PALM2Q8IXS6 379 aa10.38□□□□□ -0.75
CMSS1-201ENST00000421999 HSPH1Q92598 858 aa10.38□□□□□ -0.75
CMSS1-201ENST00000421999 ZNF512Q96ME7 567 aaPredicted RBP10.38□□□□□ -0.75
CMSS1-201ENST00000421999 FAM49BQ9NUQ9 324 aa10.38□□□□□ -0.75
CMSS1-201ENST00000421999 PTPN22Q9Y2R2 807 aa10.38□□□□□ -0.75
CMSS1-201ENST00000421999 SCINQ9Y6U3 715 aa10.38□□□□□ -0.75
CMSS1-201ENST00000421999 SYNGAP1Q96PV0 1343 aa10.38□□□□□ -0.75
CMSS1-201ENST00000421999 LRP5O75197 1615 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms