RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 IDEP14735 1019 aa28.87■■■□□ 2.21
CDK9-202ENST00000421939 RBM10P98175 930 aaKnown RBP28.87■■■□□ 2.21
CDK9-202ENST00000421939 HSP90AA2PQ14568 343 aaPredicted RBP28.87■■■□□ 2.21
CDK9-202ENST00000421939 RESP18Q5W5W9 173 aa28.87■■■□□ 2.21
CDK9-202ENST00000421939 RNF168Q8IYW5 571 aaPredicted RBP28.87■■■□□ 2.21
CDK9-202ENST00000421939 RABGGTAQ92696 567 aa28.87■■■□□ 2.21
CDK9-202ENST00000421939 MSLNLQ96KJ4 702 aa28.87■■■□□ 2.21
CDK9-202ENST00000421939 PAAF1Q9BRP4 392 aa28.87■■■□□ 2.21
CDK9-202ENST00000421939 KBTBD4Q9NVX7 518 aa28.87■■■□□ 2.21
CDK9-202ENST00000421939 FAM13BQ9NYF5 915 aa28.87■■■□□ 2.21
CDK9-202ENST00000421939 CD207Q9UJ71 328 aa28.87■■■□□ 2.21
CDK9-202ENST00000421939 ADAM28Q9UKQ2 775 aa28.87■■■□□ 2.21
CDK9-202ENST00000421939 NCOR1O75376 2440 aa28.86■■■□□ 2.21
CDK9-202ENST00000421939 FRMD3A2A2Y4 597 aa28.86■■■□□ 2.21
CDK9-202ENST00000421939 GRXCR2A6NFK2 248 aa28.86■■■□□ 2.21
CDK9-202ENST00000421939 URODP06132 367 aa28.86■■■□□ 2.21
CDK9-202ENST00000421939 KCNC3Q14003 757 aa28.86■■■□□ 2.21
CDK9-202ENST00000421939 ZC2HC1CQ53FD0 456 aaPredicted RBP28.86■■■□□ 2.21
CDK9-202ENST00000421939 XKR4Q5GH76 650 aa28.86■■■□□ 2.21
CDK9-202ENST00000421939 TMEM87AQ8NBN3 555 aa28.86■■■□□ 2.21
CDK9-202ENST00000421939 LEO1Q8WVC0 666 aaPredicted RBP28.86■■■□□ 2.21
CDK9-202ENST00000421939 HVCN1Q96D96 273 aa28.86■■■□□ 2.21
CDK9-202ENST00000421939 CHAMP1Q96JM3 812 aa28.86■■■□□ 2.21
CDK9-202ENST00000421939 NECAB3Q96P71 396 aaPredicted RBP28.86■■■□□ 2.21
CDK9-202ENST00000421939 LRRC27Q9C0I9 530 aa28.86■■■□□ 2.21
CDK9-202ENST00000421939 HAPLN2Q9GZV7 340 aa28.86■■■□□ 2.21
CDK9-202ENST00000421939 MRPL44Q9H9J2 332 aaKnown RBP28.86■■■□□ 2.21
CDK9-202ENST00000421939 FAM50BQ9Y247 325 aa28.86■■■□□ 2.21
CDK9-202ENST00000421939 CITO14578 2027 aa28.86■■■□□ 2.21
CDK9-202ENST00000421939 MUC3AQ02505 3323 aa28.85■■■□□ 2.21
CDK9-202ENST00000421939 SMIM28A0A1B0GU29 152 aa28.85■■■□□ 2.21
CDK9-202ENST00000421939 CLASP2O75122 1294 aaKnown RBP28.85■■■□□ 2.21
CDK9-202ENST00000421939 IL9P15248 144 aa28.85■■■□□ 2.21
CDK9-202ENST00000421939 SMAD4Q13485 552 aaKnown RBP28.85■■■□□ 2.21
CDK9-202ENST00000421939 SEZ6Q53EL9 994 aa28.85■■■□□ 2.21
CDK9-202ENST00000421939 LLGL2Q6P1M3 1020 aa28.85■■■□□ 2.21
CDK9-202ENST00000421939 FUT10Q6P4F1 479 aa28.85■■■□□ 2.21
CDK9-202ENST00000421939 ALKAL1Q6UXT8 129 aa28.85■■■□□ 2.21
CDK9-202ENST00000421939 ZNF720Q7Z2F6 126 aa28.85■■■□□ 2.21
CDK9-202ENST00000421939 STAMQ92783 540 aa28.85■■■□□ 2.21
CDK9-202ENST00000421939 SPATA32Q96LK8 384 aa28.85■■■□□ 2.21
CDK9-202ENST00000421939 MAGEF1Q9HAY2 307 aa28.85■■■□□ 2.21
CDK9-202ENST00000421939 OLFML3Q9NRN5 406 aa28.85■■■□□ 2.21
CDK9-202ENST00000421939 MRPL17Q9NRX2 175 aaKnown RBP28.85■■■□□ 2.21
CDK9-202ENST00000421939 HCFC2Q9Y5Z7 792 aa28.85■■■□□ 2.21
CDK9-202ENST00000421939 TRIP11Q15643 1979 aa28.84■■■□□ 2.21
CDK9-202ENST00000421939 POLR2DO15514 142 aaKnown RBP28.84■■■□□ 2.21
CDK9-202ENST00000421939 PPP1R37O75864 691 aa28.84■■■□□ 2.21
CDK9-202ENST00000421939 KIF4AO95239 1232 aa28.84■■■□□ 2.21
CDK9-202ENST00000421939 COASYQ13057 564 aa28.84■■■□□ 2.21
CDK9-202ENST00000421939 HERC4Q5GLZ8 1057 aaPredicted RBP28.84■■■□□ 2.21
CDK9-202ENST00000421939 TMEM184AQ6ZMB5 413 aa28.84■■■□□ 2.21
CDK9-202ENST00000421939 TAS1R1Q7RTX1 841 aa28.84■■■□□ 2.21
CDK9-202ENST00000421939 PANK4Q9NVE7 773 aa28.84■■■□□ 2.21
CDK9-202ENST00000421939 TBC1D7Q9P0N9 293 aa28.84■■■□□ 2.21
CDK9-202ENST00000421939 CNTN3Q9P232 1028 aa28.84■■■□□ 2.21
CDK9-202ENST00000421939 SF3B1O75533 1304 aaKnown RBP eCLIP28.84■■■□□ 2.212e-9■■■■■ 80.4
CDK9-202ENST00000421939 TADA2AO75478 443 aa28.83■■■□□ 2.21
CDK9-202ENST00000421939 KCNE1P15382 129 aa28.83■■■□□ 2.21
CDK9-202ENST00000421939 GLUD2P49448 558 aa28.83■■■□□ 2.21
CDK9-202ENST00000421939 AMPD3Q01432 767 aa28.83■■■□□ 2.21
CDK9-202ENST00000421939 SLC39A4Q6P5W5 647 aa28.83■■■□□ 2.21
CDK9-202ENST00000421939 CCDC65Q8IXS2 484 aa28.83■■■□□ 2.21
CDK9-202ENST00000421939 SMRP1Q8NCR6 262 aa28.83■■■□□ 2.21
CDK9-202ENST00000421939 HASPINQ8TF76 798 aa28.83■■■□□ 2.21
CDK9-202ENST00000421939 CASP10Q92851 521 aa28.83■■■□□ 2.21
CDK9-202ENST00000421939 EMILIN2Q9BXX0 1053 aa28.83■■■□□ 2.21
CDK9-202ENST00000421939 GPR62Q9BZJ7 368 aa28.83■■■□□ 2.21
CDK9-202ENST00000421939 TRIM9Q9C026 710 aa28.83■■■□□ 2.21
CDK9-202ENST00000421939 BDP1A6H8Y1 2624 aa28.83■■■□□ 2.21
CDK9-202ENST00000421939 C2CD2LO14523 706 aa28.82■■■□□ 2.2
CDK9-202ENST00000421939 MEFVO15553 781 aaPredicted RBP28.82■■■□□ 2.2
CDK9-202ENST00000421939 MBTPS2O43462 519 aa28.82■■■□□ 2.2
CDK9-202ENST00000421939 LILRB3O75022 631 aa28.82■■■□□ 2.2
CDK9-202ENST00000421939 CLTAP09496 248 aa28.82■■■□□ 2.2
CDK9-202ENST00000421939 KYAT1Q16773 422 aa28.82■■■□□ 2.2
CDK9-202ENST00000421939 UROC1Q96N76 676 aa28.82■■■□□ 2.2
CDK9-202ENST00000421939 ZMAT2Q96NC0 199 aaKnown RBP28.82■■■□□ 2.2
CDK9-202ENST00000421939 PYM1Q9BRP8 204 aaKnown RBP28.82■■■□□ 2.2
CDK9-202ENST00000421939 MSTO1Q9BUK6 570 aa28.82■■■□□ 2.2
CDK9-202ENST00000421939 STRA6Q9BX79 667 aa28.82■■■□□ 2.2
CDK9-202ENST00000421939 SLC38A7Q9NVC3 462 aa28.82■■■□□ 2.2
CDK9-202ENST00000421939 SSX2IPQ9Y2D8 614 aa28.82■■■□□ 2.2
CDK9-202ENST00000421939 A0A0B4J269 797 aa28.81■■■□□ 2.2
CDK9-202ENST00000421939 OGTO15294 1046 aa28.81■■■□□ 2.2
CDK9-202ENST00000421939 GCNT3O95395 438 aa28.81■■■□□ 2.2
CDK9-202ENST00000421939 CXCL8P10145 99 aa28.81■■■□□ 2.2
CDK9-202ENST00000421939 DSG1Q02413 1049 aa28.81■■■□□ 2.2
CDK9-202ENST00000421939 SLC10A6Q3KNW5 377 aa28.81■■■□□ 2.2
CDK9-202ENST00000421939 KIAA1841Q6NSI8 718 aa28.81■■■□□ 2.2
CDK9-202ENST00000421939 GOLGA2P5Q9HBQ8 144 aa28.81■■■□□ 2.2
CDK9-202ENST00000421939 CHST7Q9NS84 486 aa28.81■■■□□ 2.2
CDK9-202ENST00000421939 KCNH3Q9ULD8 1083 aa28.81■■■□□ 2.2
CDK9-202ENST00000421939 FAM189A1O60320 539 aa28.8■■■□□ 2.2
CDK9-202ENST00000421939 CNPP09543 421 aaKnown RBP28.8■■■□□ 2.2
CDK9-202ENST00000421939 ASIC1P78348 528 aa28.8■■■□□ 2.2
CDK9-202ENST00000421939 ALCAMQ13740 583 aa28.8■■■□□ 2.2
CDK9-202ENST00000421939 USP41Q3LFD5 358 aa28.8■■■□□ 2.2
CDK9-202ENST00000421939 KIAA0319Q5VV43 1072 aa28.8■■■□□ 2.2
CDK9-202ENST00000421939 ANKRD54Q6NXT1 300 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms